Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsZS97_12G0187900 | OGI:12007550 | 16/16 | Zhenshan 97 | ZS97RS3 | HZAU | Chr12:11880354-11884742 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | ATGGGCAATCGCCCGGCAGTGAGGGGACTTCTGGATCTTCAGAAGTCGGAAGGGATGGACGTCTTGTTTTTGTCAGAAACAAAACTTGATACGAGAAGAATGCAGCGTTTTAGGTGGATGCTTGGTCTGACAGGCATGGTGGTAAAGGATTGTGTTGGAAAAGGGGGAGGGGAATTGCAGTGTTATGGAGGAGGGGGATCGATGTGACACTTAGGAGCATGTCGAAGTATCACATTGATGTGGACATAACTGAAGGGGGGAGTGCGAGCTGGAGGTTCACGAGGATCTATGGAGATGCCCAAACTGAACAAAGATACAAAACCTGGGACACAATTCGGAGCTTGGTGGTGAACCCGGTCCAGCCGTGGTTGTTGGCAGGTGATTTTAATGAAATCCTCTTTGAAAGGGAGAAACAGGGGGGAAGCCAAAGAGTCGAGCTTGCATGGACAAATTTAAAGATACCATGGTAGATTGTGGGTTGCAGGACCTTGGTTTCGAAGGGGACATGTTTACATGGCAGAATCACAGCCATACAGAAGAAGGATACATCAGGGAACGTTTGGGCAGGGCTGTGGCGAATCAGGAGTGGCGAATGAGATTCCCAACAACCAGGGTAGTCAATGGGGACCCGAGGCATTCAGATGACAGGCTGGTGATCATCACAACCTGTGGGGGGAGAAAGGAGGACAATCGAAGGGGAGTGGGGGGTTTTCCGGTTTGAAGCGGCCTGGCTATCAGAAGAGAAATGCAAAGAAGTTGTTGGGGAGAATTGGGAGATGGCCTCACACCTCCAGGGGAAAGATGTGATAAATTTGATGAAAGATATTATTGTAGGACTATCTAGTTGGAGTACTAATGTACTGGGTGGTCTAGAGAAGTGAATAAAGAAGCTGAAAAAGGAGTTAAAAACATGTCGACGGGGAAATATATGCAAAGAACGAGTGGTACAGGAGGAGGTGCTTAGATATAAATTGGAGAGGCTAGAAGAGCAAGTTGATCTATACTAGAGGCAGAGAGCGCATATCCAATGGTTGCAAAAAGGGGATCAAAACACCTCCTTTTTTCATGCGGCGTGTTCAGAAAGAAGGAGAAGAAACAAGATTGGGCGTTTGAAGAATGATGAGGGTGTGTGGGTAGAAAATGAAGAGGAGAAGAGGGGGATGATAGCACAGTACTTTAAGACTTTGTTTAGTTCAAATAGGGGGAATAACTCTGATCAACTGCTGGATGTGGTGGAGAGGAAAGTGACAGAGGACATGAATGAGTTACTAACAAGTGCATACAGAAGTGAAGAAATAAAAGAGGCCTTAGATTCTATCGGGGATTTAAAGGCCCCAGGCCCGGATGGGATGCCGGCAGTGTTCTATAAGAACTTTTGGGACTTGATGGGGGAGAAAATCACCTCAGAGGTTCAGGAAATCCTAAACGGAGGACAAATACCACAAGAGTGGAACGAGACAACAATTGTCTTAATCCCAAAGGTTAAAACCTTTGAATTAATTAAAGACCTACGGCCCATTAGTGTGTGTAATGTGCTGTATAAGATAGTCTCTAAGGTGCTAGCAAATAGATTGAAGAAGATTCTGCCTGAAGTTATATCGCAGTCACAAAGTGCTTTTTTCCCAGGCCGACTAATTTCTGATAACATCTTAGTGGCATATGAATTGACACATTATATGAGGCAGAAAAGAAATGGGGAGACCGGCTATGCGGCACTGAAATTAGACATGAGCAAGGCTTATGATAGAGTGGAGTGGGGTTTCTTAAAGGATATGATGCTGAAATTGGGTTTTAATCAGGAATGGACACAATTAATCATGAAGTGTATCACATTTGTCACATATAGAATCCGAGTGAATGGGGAGCTAATAGAAGTTATCCAGCCGGAAAGGGGATTGCAGCAGGGGGATCCACTGTCCCCATATCTTTTCCTGCTCTGTGCTGAAGGTTTCTCAGCTCTAATAAGAAAGGCGGAAGAAGAAGGGAGTTTACAGGGAGTACGGGTCTGTCAGGGTGCACCGAGTGTGTCTCATTTGCTTTTCGCCGATGATTCTCTAATCTTATGTCGGGTGGATCGAAGAGATGCACAGCAGCTACAAAGTATACTTCAGGTGTATGAGGAGTGCTTTGGACAGATGATTTATAAAGATAAATCAGCTGTGATGTTTAGTCGTAATACGTCTGCAGCGAAGAAGGGGGATTTTATGAGGGAGCTAAATCTGCAGAGGGAGACAATAAATGACAGGTATCTTGGATTGCCTGTCCATGTTGGGATGTCAAAAACTAAGATGTTTGCTTATCTTAAAGAGAAAATCTGGCAAAGGATTCAAGGTTGGAAAGAGAAGATGTTATCTAGAGCAGGAAAGGAAGTTTTGATCAAGGCTATTGTACAAGCAATACCTAGTTTTGCCATGGGGTGTTTTGACCTAACAAAAGAAATTTGTGAGCAGATAAGCAAAATGATAGCAAAGTTCTGGTGGAGTAACCAGGACAGAGAAAATAAGATACATTGGCTAAGTTGGGAGAAACTGACGGCACCAAAATGTTGTGGGGGGCTGGGTTTCAGAGATATTCATGTTTTCAATATGGCCATGCTAGCAAAACAGGGTTGGAGGTTGTTGCAAAACCCTGAATCTTTGTGCGCCCGGGTCTTAAGAGCTAAATATTTCCCGCAGGGGGACATTTCCCAGTCAAAAACTACAGCAAATATGTCATACACTTGGAGGAGTATTTGTCGGGGGTTGGGTGTTCTAAAGAATGGGATGATATGGAGAGTTGGGAATGGCTCACACATCAATATTTGGTCTGATCCATGGCTGCCAAGGGGCCAAACAAGGAAGCCAATTATACCGAAGGGGAGTAATATCATCACAAAGGTGGAGGAACTGATTGATCCATATACTGGGAGATGGGATGTTGAGCTGCTGAAGCAAACTTTCTAGGAGGAGGACATTGATATAATTCGATCAATTCCGGTGCATATCAAGATGGATGATGTCTTGGCATGGCATTATGATAACAAAGGTGTTTTTTCTGTGAAATCTGCATATAAAGTGCAGCGGGAATGGGAGAGACAAGGACGATGAAGGGGAGATGCAGGCTCATCAAACGGAGGTAGAGAACCTGATCTTTTCTGGAAGAAGGTATGGAAGATGCAGATTCCAGGAAAAGTGAAGCATTTCTTTTGGAGGTTCTGCCACAATAGTTTGGCTCTGAGAACAAATCTGAACCATTGGGGTTTGGACATAGATACAAGGTGTGTTATGTGCAATCGTATGAATGAAGATGCATGACATTTGTTTTTCAAATGTAAGTTTGTGAAGCATGTTTTGCGGGAGATTAATATGGAATCTTTGAGAGCTGAGCTTGAAGAACGGGTGTCAGGAAGAGAAGTGATGGAGAGAATCTGGGCCCAATGTACTAGAAATGGAACGATTGCGATTATCCTTCTCTGGCTCTGGTGGGGTGAGCGAAATAGAGTTAGAGAAGGGGAGCAGAGAAGAACGGCAGCTGAATTGGCCTTCATGGCGACAGCGCAAACAGAAGAGTTTCTGAAGATACACCAAAAAGAAAAAAAGCAGAAACTGGGAGCCCCTGGCAAATGGAGTAAACCAGATATGGGAGTTATGAAGATAAACTCGGATGGTGCTTTTGATCCAAATAACAGAAAGGGAGGATGGGGATTCATTATCAGAGATCATCTTGGAATGGTAATCAAGGCAGGAGCAGGGAGAACACACGTTCTTCTAGATGCGTTCCATGCGGAAGTTCTCGCTTGTGCAGCTGGGATCAAAGCAGCAAATGAATGCGGGCTGCAGAGAGTGGAGGCAGAGACAGACTCACTGATGCTGAAAATGGCGATGGAAGACAACAGCTATGCTCTTTCAGCTTTAGGTGGCATAATATGCGAGATGAAGAATTTTGTTAACACAAATTTTAGGTCTTTCTCTGTTAAGTACTGCCCAAGGGGTTGTAATAAAGTGGCGCATGCCTTAGCAGCGCTGGGTTGTAATGATCATCTGCAAAACACTCTGAGTTGGGATGATGTTCCCTCGGAGGTGGCGGAGTTGGTGACCAGTGATATCACTGAGTCTATAAGTTACTGGAAAATGTTTTCCATGTCAAAAAAAAATATAATATTTAGGAAGGTACAGTTGGAATGATCTTAAAATGCACATTGTATCTAGGATGCATGTCATCTGCATTATTGCATGTGCGGTACTGCTCATTGATGTGTGGGCCCACAGCCCCTCAGGCCCACATGTCACAGTGGCGGAGCGCTCGATGTGGCGAGGTCTGGCGCTTGCCATACCATGCTCCAGCTGCCGGTACCCCCACACCCCGCGCGCGTTTTTACCGCAACTCCACGAGCACAAGCTGCAGGCATAG
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| CDS seq | ATGGGCAATCGCCCGGCAGTGAGGGGACTTCTGGATCTTCAGAAGCATGGTGGTAAAGGATTGTGTTGGAAAAGGGGGAGGGGAATTGCAGTGTTATGGAGGAGGGGGATCGATGTGACACTTAGGAGCATGTCGAAGTATCACATTGATGTGGACATAACTGAAGGGGGGAGTGCGAGCTGGAGGTTCACGAGGATCTATGGAGATGCCCAAACTGAACAAAGATACAAAACCTGGGACACAATTCGGAGCTTGGTGGTGAACCCGGTCCAGCCGTGGTTGTTGGCAGGGGGGAAGCCAAAGAGTCGAGCTTGCATGGACAAATTTAAAGATACCATGGTAGATTGTGGGTTGCAGGACCTTGGTTTCGAAGGGGACATGTTTACATGGCAGAATCACAGCCATACAGAAGAAGGATACATCAGGGAACGTTTGGGCAGGGCTGTGGCGAATCAGGAGTGGCGAATGAGATTCCCAACAACCAGGGTAGTCAATGGGGACCCGAGGCATTCAGATGACAGGCTGGTGATCATCACAACCTGGGAGTGGGGGGTTTTCCGGTTTGAAGCGGCCTGGCTATCAGAAGAGAAATGCAAAGAAGTTGTTGGGGAGAATTGGGAGATGGCCTCACACCTCCAGGGGAAAGATGTGATAAATTTGATGAAAGATATTATTGTAGGACTATCTAGTTGGAGTACTAATGTACTGGGTGGTCTAGAGAAGCAGAGAGCGCATATCCAATGGTTGCAAAAAGGGGATCAAAACACCTCCTTTTTTCATGCGGCGTGTTCAGAAAGAAGGAGAAGAAACAAGATTGGGCGTTTGAAGAATGATGAGGGTGTGTGGGTAGAAAATGAAGAGGAGAAGAGGGGGATGATAGCACAGTACTTTAAGACTTTGTTTAGTTCAAATAGGGGGAATAACTCTGATCAACTGCTGGATGTGGTGGAGAGGAAAGTGACAGAGGACATGAATGAGTTACTAACAAGTGCATACAGAAGTGAAGAAATAAAAGAGGCCTTAGATTCTATCGGGGATTTAAAGGCCCCAGGCCCGGATGGGATGCCGGCAGTGTTCTATAAGAACTTTTGGGACTTGATGGGGGAGAAAATCACCTCAGAGGTTCAGGAAATCCTAAACGGAGGACAAATACCACAAGAGTGGAACGAGACAACAATTGTCTTAATCCCAAAGGTTAAAACCTTTGAATTAATTAAAGACCTACGGCCCATTAGTGTGTGTAATGTGCTGTATAAGATAGTCTCTAAGGTGCTAGCAAATAGATTGAAGAAGATTCTGCCTGAAGTTATATCGCAGTCACAAAGTGCTTTTTTCCCAGGCCGACTAATTTCTGATAACATCTTAGTGGCATATGAATTGACACATTATATGAGGCAGAAAAGAAATGGGGAGACCGGCTATGCGGCACTGAAATTAGACATGAGCAAGGCTTATGATAGAGTGGAGTGGGGTTTCTTAAAGGATATGATGCTGAAATTGGGTTTTAATCAGGAATGGACACAATTAATCATGAAGTGTATCACATTTGTCACATATAGAATCCGAGTGAATGGGGAGCTAATAGAAGTTATCCAGCCGGAAAGGGGATTGCAGCAGGGGGATCCACTGTCCCCATATCTTTTCCTGCTCTGTGCTGAAGGTTTCTCAGCTCTAATAAGAAAGGCGGAAGAAGAAGGGAGTTTACAGGGAGTACGGGTCTGTCAGGGTGCACCGAGTGTGTCTCATTTGCTTTTCGCCGATGATTCTCTAATCTTATGTCGGGTGGATCGAAGAGATGCACAGCAGCTACAAAGTATACTTCAGGTGTATGAGGAGTGCTTTGGACAGATGATTTATAAAGATAAATCAGCTGTGATGTTTAGTCGTAATACGTCTGCAGCGAAGAAGGGGGATTTTATGAGGGAGCTAAATCTGCAGAGGGAGACAATAAATGACAGGTATCTTGGATTGCCTGTCCATGTTGGGATGTCAAAAACTAAGATGTTTGCTTATCTTAAAGAGAAAATCTGGCAAAGGATTCAAGGTTGGAAAGAGAAGATGTTATCTAGAGCAGGAAAGGAAGTTTTGATCAAGGCTATTGTACAAGCAATACCTAGTTTTGCCATGGGGTGTTTTGACCTAACAAAAGAAATTTGTGAGCAGATAAGCAAAATGATAGCAAAGTTCTGGTGGAGTAACCAGGACAGAGAAAATAAGATACATTGGCTAAGTTGGGAGAAACTGACGGCACCAAAATGTTGTGGGGGGCTGGGTTTCAGAGATATTCATGTTTTCAATATGGCCATGCTAGCAAAACAGGGTTGGAGGTTGTTGCAAAACCCTGAATCTTTGTGCGCCCGGGTCTTAAGAGCTAAATATTTCCCGCAGGGGGACATTTCCCAGTCAAAAACTACAGCAAATATGTCATACACTTGGAGGAGTATTTGTCGGGGGTTGGGTGTTCTAAAGAATGGGATGATATGGAGAGTTGGGAATGGCTCACACATCAATATTTGGTCTGATCCATGGCTGCCAAGGGGCCAAACAAGGAAGCCAATTATACCGAAGGGGAGTAATATCATCACAAAGGTGGAGGAACTGATTGATCCATATACTGGGAGATGGGATGTTGAGCTGCTGAAGGGAGATGCAGGCTCATCAAACGGAGGTAGAGAACCTGATCTTTTCTGGAAGAAGGTATGGAAGATGCAGATTCCAGGAAAAGTGAAGCATTTCTTTTGGAGGTTCTGCCACAATAGTTTGGCTCTGAGAACAAATCTGAACCATTGGGGTTTGGACATAGATACAAGAGCTGAGCTTGAAGAACGGGTGTCAGGAAGAGAAGTGATGGAGAGAATCTGGGCCCAATGTACTAGAAATGGAACGATTGCGATTATCCTTCTCTGGCTCTGGTGGGGTGAGCGAAATAGAGTTAGAGAAGGGGAGCAGAGAAGAACGGCAGCTGAATTGGCCTTCATGGCGACAGCGCAAACAGAAGAGTTTCTGAAGATACACCAAAAAGAAAAAAAGCAGAAACTGGGAGCCCCTGGCAAATGGAGTAAACCAGATATGGGAGTTATGAAGATAAACTCGGATGGTGCTTTTGATCCAAATAACAGAAAGGGAGGATGGGGATTCATTATCAGAGATCATCTTGGAATGGTAATCAAGGCAGGAGCAGGGAGAACACACGTTCTTCTAGATGCGTTCCATGCGGAAGTTCTCGCTTGTGCAGCTGGGATCAAAGCAGCAAATGAATGCGGGCTGCAGAGAGTGGAGGCAGAGACAGACTCACTGATGCTGAAAATGGCGATGGAAGACAACAGCTATGCTCTTTCAGCTTTAGGTGGCATAATATGCGAGATGAAGAATTTTGTTAACACAAATTTTAGGTCTTTCTCTGTTAAGTACTGCCCAAGGGGTTGTAATAAAGTGGCGCATGCCTTAGCAGCGCTGGGTTGTAATGATCATCTGCAAAACACTCTGAGTTGGGATGATGTTCCCTCGGAGGTGGCGGAGTTGGTGACCAGTGATATCACTGACCCCTCAGGCCCACATGTCACAGTGGCGGAGCGCTCGATGTGGCGAGGTCTGGCGCTTGCCATACCATGCTCCAGCTGCCGGTACCCCCACACCCCGCGCGCGTTTTTACCGCAACTCCACGAGCACAAGCTGCAGGCATAG
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| Protein seq | MGNRPAVRGLLDLQKHGGKGLCWKRGRGIAVLWRRGIDVTLRSMSKYHIDVDITEGGSASWRFTRIYGDAQTEQRYKTWDTIRSLVVNPVQPWLLAGGKPKSRACMDKFKDTMVDCGLQDLGFEGDMFTWQNHSHTEEGYIRERLGRAVANQEWRMRFPTTRVVNGDPRHSDDRLVIITTWEWGVFRFEAAWLSEEKCKEVVGENWEMASHLQGKDVINLMKDIIVGLSSWSTNVLGGLEKQRAHIQWLQKGDQNTSFFHAACSERRRRNKIGRLKNDEGVWVENEEEKRGMIAQYFKTLFSSNRGNNSDQLLDVVERKVTEDMNELLTSAYRSEEIKEALDSIGDLKAPGPDGMPAVFYKNFWDLMGEKITSEVQEILNGGQIPQEWNETTIVLIPKVKTFELIKDLRPISVCNVLYKIVSKVLANRLKKILPEVISQSQSAFFPGRLISDNILVAYELTHYMRQKRNGETGYAALKLDMSKAYDRVEWGFLKDMMLKLGFNQEWTQLIMKCITFVTYRIRVNGELIEVIQPERGLQQGDPLSPYLFLLCAEGFSALIRKAEEEGSLQGVRVCQGAPSVSHLLFADDSLILCRVDRRDAQQLQSILQVYEECFGQMIYKDKSAVMFSRNTSAAKKGDFMRELNLQRETINDRYLGLPVHVGMSKTKMFAYLKEKIWQRIQGWKEKMLSRAGKEVLIKAIVQAIPSFAMGCFDLTKEICEQISKMIAKFWWSNQDRENKIHWLSWEKLTAPKCCGGLGFRDIHVFNMAMLAKQGWRLLQNPESLCARVLRAKYFPQGDISQSKTTANMSYTWRSICRGLGVLKNGMIWRVGNGSHINIWSDPWLPRGQTRKPIIPKGSNIITKVEELIDPYTGRWDVELLKGDAGSSNGGREPDLFWKKVWKMQIPGKVKHFFWRFCHNSLALRTNLNHWGLDIDTRAELEERVSGREVMERIWAQCTRNGTIAIILLWLWWGERNRVREGEQRRTAAELAFMATAQTEEFLKIHQKEKKQKLGAPGKWSKPDMGVMKINSDGAFDPNNRKGGWGFIIRDHLGMVIKAGAGRTHVLLDAFHAEVLACAAGIKAANECGLQRVEAETDSLMLKMAMEDNSYALSALGGIICEMKNFVNTNFRSFSVKYCPRGCNKVAHALAALGCNDHLQNTLSWDDVPSEVAELVTSDITDPSGPHVTVAERSMWRGLALAIPCSSCRYPHTPRAFLPQLHEHKLQA |
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| Function | LINE-1 retrotransposable element ORF2 protein [UniProtKB/Swiss-Prot:P11369] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsZS97_12G0187900 | OsZS97_12T0187900.1 | Chr12 | 11880354 | 11884742 | + | makerRMon | ||
| CDS seq | ATGGGCAATCGCCCGGCAGTGAGGGGACTTCTGGATCTTCAGAAGCATGGTGGTAAAGGATTGTGTTGGAAAAGGGGGAGGGGAATTGCAGTGTTATGGAGGAGGGGGATCGATGTGACACTTAGGAGCATGTCGAAGTATCACATTGATGTGGACATAACTGAAGGGGGGAGTGCGAGCTGGAGGTTCACGAGGATCTATGGAGATGCCCAAACTGAACAAAGATACAAAACCTGGGACACAATTCGGAGCTTGGTGGTGAACCCGGTCCAGCCGTGGTTGTTGGCAGGGGGGAAGCCAAAGAGTCGAGCTTGCATGGACAAATTTAAAGATACCATGGTAGATTGTGGGTTGCAGGACCTTGGTTTCGAAGGGGACATGTTTACATGGCAGAATCACAGCCATACAGAAGAAGGATACATCAGGGAACGTTTGGGCAGGGCTGTGGCGAATCAGGAGTGGCGAATGAGATTCCCAACAACCAGGGTAGTCAATGGGGACCCGAGGCATTCAGATGACAGGCTGGTGATCATCACAACCTGGGAGTGGGGGGTTTTCCGGTTTGAAGCGGCCTGGCTATCAGAAGAGAAATGCAAAGAAGTTGTTGGGGAGAATTGGGAGATGGCCTCACACCTCCAGGGGAAAGATGTGATAAATTTGATGAAAGATATTATTGTAGGACTATCTAGTTGGAGTACTAATGTACTGGGTGGTCTAGAGAAGCAGAGAGCGCATATCCAATGGTTGCAAAAAGGGGATCAAAACACCTCCTTTTTTCATGCGGCGTGTTCAGAAAGAAGGAGAAGAAACAAGATTGGGCGTTTGAAGAATGATGAGGGTGTGTGGGTAGAAAATGAAGAGGAGAAGAGGGGGATGATAGCACAGTACTTTAAGACTTTGTTTAGTTCAAATAGGGGGAATAACTCTGATCAACTGCTGGATGTGGTGGAGAGGAAAGTGACAGAGGACATGAATGAGTTACTAACAAGTGCATACAGAAGTGAAGAAATAAAAGAGGCCTTAGATTCTATCGGGGATTTAAAGGCCCCAGGCCCGGATGGGATGCCGGCAGTGTTCTATAAGAACTTTTGGGACTTGATGGGGGAGAAAATCACCTCAGAGGTTCAGGAAATCCTAAACGGAGGACAAATACCACAAGAGTGGAACGAGACAACAATTGTCTTAATCCCAAAGGTTAAAACCTTTGAATTAATTAAAGACCTACGGCCCATTAGTGTGTGTAATGTGCTGTATAAGATAGTCTCTAAGGTGCTAGCAAATAGATTGAAGAAGATTCTGCCTGAAGTTATATCGCAGTCACAAAGTGCTTTTTTCCCAGGCCGACTAATTTCTGATAACATCTTAGTGGCATATGAATTGACACATTATATGAGGCAGAAAAGAAATGGGGAGACCGGCTATGCGGCACTGAAATTAGACATGAGCAAGGCTTATGATAGAGTGGAGTGGGGTTTCTTAAAGGATATGATGCTGAAATTGGGTTTTAATCAGGAATGGACACAATTAATCATGAAGTGTATCACATTTGTCACATATAGAATCCGAGTGAATGGGGAGCTAATAGAAGTTATCCAGCCGGAAAGGGGATTGCAGCAGGGGGATCCACTGTCCCCATATCTTTTCCTGCTCTGTGCTGAAGGTTTCTCAGCTCTAATAAGAAAGGCGGAAGAAGAAGGGAGTTTACAGGGAGTACGGGTCTGTCAGGGTGCACCGAGTGTGTCTCATTTGCTTTTCGCCGATGATTCTCTAATCTTATGTCGGGTGGATCGAAGAGATGCACAGCAGCTACAAAGTATACTTCAGGTGTATGAGGAGTGCTTTGGACAGATGATTTATAAAGATAAATCAGCTGTGATGTTTAGTCGTAATACGTCTGCAGCGAAGAAGGGGGATTTTATGAGGGAGCTAAATCTGCAGAGGGAGACAATAAATGACAGGTATCTTGGATTGCCTGTCCATGTTGGGATGTCAAAAACTAAGATGTTTGCTTATCTTAAAGAGAAAATCTGGCAAAGGATTCAAGGTTGGAAAGAGAAGATGTTATCTAGAGCAGGAAAGGAAGTTTTGATCAAGGCTATTGTACAAGCAATACCTAGTTTTGCCATGGGGTGTTTTGACCTAACAAAAGAAATTTGTGAGCAGATAAGCAAAATGATAGCAAAGTTCTGGTGGAGTAACCAGGACAGAGAAAATAAGATACATTGGCTAAGTTGGGAGAAACTGACGGCACCAAAATGTTGTGGGGGGCTGGGTTTCAGAGATATTCATGTTTTCAATATGGCCATGCTAGCAAAACAGGGTTGGAGGTTGTTGCAAAACCCTGAATCTTTGTGCGCCCGGGTCTTAAGAGCTAAATATTTCCCGCAGGGGGACATTTCCCAGTCAAAAACTACAGCAAATATGTCATACACTTGGAGGAGTATTTGTCGGGGGTTGGGTGTTCTAAAGAATGGGATGATATGGAGAGTTGGGAATGGCTCACACATCAATATTTGGTCTGATCCATGGCTGCCAAGGGGCCAAACAAGGAAGCCAATTATACCGAAGGGGAGTAATATCATCACAAAGGTGGAGGAACTGATTGATCCATATACTGGGAGATGGGATGTTGAGCTGCTGAAGGGAGATGCAGGCTCATCAAACGGAGGTAGAGAACCTGATCTTTTCTGGAAGAAGGTATGGAAGATGCAGATTCCAGGAAAAGTGAAGCATTTCTTTTGGAGGTTCTGCCACAATAGTTTGGCTCTGAGAACAAATCTGAACCATTGGGGTTTGGACATAGATACAAGAGCTGAGCTTGAAGAACGGGTGTCAGGAAGAGAAGTGATGGAGAGAATCTGGGCCCAATGTACTAGAAATGGAACGATTGCGATTATCCTTCTCTGGCTCTGGTGGGGTGAGCGAAATAGAGTTAGAGAAGGGGAGCAGAGAAGAACGGCAGCTGAATTGGCCTTCATGGCGACAGCGCAAACAGAAGAGTTTCTGAAGATACACCAAAAAGAAAAAAAGCAGAAACTGGGAGCCCCTGGCAAATGGAGTAAACCAGATATGGGAGTTATGAAGATAAACTCGGATGGTGCTTTTGATCCAAATAACAGAAAGGGAGGATGGGGATTCATTATCAGAGATCATCTTGGAATGGTAATCAAGGCAGGAGCAGGGAGAACACACGTTCTTCTAGATGCGTTCCATGCGGAAGTTCTCGCTTGTGCAGCTGGGATCAAAGCAGCAAATGAATGCGGGCTGCAGAGAGTGGAGGCAGAGACAGACTCACTGATGCTGAAAATGGCGATGGAAGACAACAGCTATGCTCTTTCAGCTTTAGGTGGCATAATATGCGAGATGAAGAATTTTGTTAACACAAATTTTAGGTCTTTCTCTGTTAAGTACTGCCCAAGGGGTTGTAATAAAGTGGCGCATGCCTTAGCAGCGCTGGGTTGTAATGATCATCTGCAAAACACTCTGAGTTGGGATGATGTTCCCTCGGAGGTGGCGGAGTTGGTGACCAGTGATATCACTGACCCCTCAGGCCCACATGTCACAGTGGCGGAGCGCTCGATGTGGCGAGGTCTGGCGCTTGCCATACCATGCTCCAGCTGCCGGTACCCCCACACCCCGCGCGCGTTTTTACCGCAACTCCACGAGCACAAGCTGCAGGCATAG
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| Protein seq | MGNRPAVRGLLDLQKHGGKGLCWKRGRGIAVLWRRGIDVTLRSMSKYHIDVDITEGGSASWRFTRIYGDAQTEQRYKTWDTIRSLVVNPVQPWLLAGGKPKSRACMDKFKDTMVDCGLQDLGFEGDMFTWQNHSHTEEGYIRERLGRAVANQEWRMRFPTTRVVNGDPRHSDDRLVIITTWEWGVFRFEAAWLSEEKCKEVVGENWEMASHLQGKDVINLMKDIIVGLSSWSTNVLGGLEKQRAHIQWLQKGDQNTSFFHAACSERRRRNKIGRLKNDEGVWVENEEEKRGMIAQYFKTLFSSNRGNNSDQLLDVVERKVTEDMNELLTSAYRSEEIKEALDSIGDLKAPGPDGMPAVFYKNFWDLMGEKITSEVQEILNGGQIPQEWNETTIVLIPKVKTFELIKDLRPISVCNVLYKIVSKVLANRLKKILPEVISQSQSAFFPGRLISDNILVAYELTHYMRQKRNGETGYAALKLDMSKAYDRVEWGFLKDMMLKLGFNQEWTQLIMKCITFVTYRIRVNGELIEVIQPERGLQQGDPLSPYLFLLCAEGFSALIRKAEEEGSLQGVRVCQGAPSVSHLLFADDSLILCRVDRRDAQQLQSILQVYEECFGQMIYKDKSAVMFSRNTSAAKKGDFMRELNLQRETINDRYLGLPVHVGMSKTKMFAYLKEKIWQRIQGWKEKMLSRAGKEVLIKAIVQAIPSFAMGCFDLTKEICEQISKMIAKFWWSNQDRENKIHWLSWEKLTAPKCCGGLGFRDIHVFNMAMLAKQGWRLLQNPESLCARVLRAKYFPQGDISQSKTTANMSYTWRSICRGLGVLKNGMIWRVGNGSHINIWSDPWLPRGQTRKPIIPKGSNIITKVEELIDPYTGRWDVELLKGDAGSSNGGREPDLFWKKVWKMQIPGKVKHFFWRFCHNSLALRTNLNHWGLDIDTRAELEERVSGREVMERIWAQCTRNGTIAIILLWLWWGERNRVREGEQRRTAAELAFMATAQTEEFLKIHQKEKKQKLGAPGKWSKPDMGVMKINSDGAFDPNNRKGGWGFIIRDHLGMVIKAGAGRTHVLLDAFHAEVLACAAGIKAANECGLQRVEAETDSLMLKMAMEDNSYALSALGGIICEMKNFVNTNFRSFSVKYCPRGCNKVAHALAALGCNDHLQNTLSWDDVPSEVAELVTSDITDPSGPHVTVAERSMWRGLALAIPCSSCRYPHTPRAFLPQLHEHKLQA
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0 | 0.002448 | 0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_12g0407750 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os12g21910 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os12g0407750 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_12g0010510 | RBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_12g0010720 | RBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_12g0010670 | RBH | 0.0 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_12g0010490 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_12G0193000 | SBH | 0.0760585 | 0.6827515 | 0.530467 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_12g0010350 | RBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | NA | NA | NA | NA | NA |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_12g0010230 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_12g0010590 | SBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_12g0010470 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_12g0010410 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_12g0010590 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_12G010360 | RBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_12g0010170 | RBH | 0.0 | 0.0 | 0.0 |
