Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsZS97_12G0068000 | OGI:12010140 | 16/16 | Zhenshan 97 | ZS97RS3 | HZAU | Chr12:3879659-3880213 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | ATGGCCGCCATGCTCATCTCGCGACGCAGCATCCAGCTCGTCCTCGTCGTCGCCGCCGTGGTCGCCATCGCCGGAGCTGTCCATGCTGCCGCGGGGGAGACGACGGCGACGACGACGCACATCAAGGTGTACTGGCACGACGTGGTGAGCGGGCCGAGCCCGACGGCGGTGCAGGTGGCGAGGGCGGCGACGACCAACTCGTCGGCGAGCTTCTTCGGCGCCGTGGTGGTGATCGACGACCCGCTGACGTCGGGCCCCGACCTGAACGCCTCGTCGCCGGTGGGCCGCGCCCAGGGCACCTACGTCAGCGCCGGCAAGGACACGGTGGCGCTGCTCATGAACATGAACTTCGTCTTCCAGTCCGGCAGGTACAACGGCAGCACCGTCGCCATCATGGGCCGCAACGAGGTCTTCGCCGCCGTCCGCGAGATGGCCGTCGTCGGCGGCACCGGCGTCTTCCGGTGGGCCCGCGGCTACGCCCAGGCCCGGACCCACACCTTCGACATGAAGACCGGCGACGCCACCGTTGAGTACAACCTCTACATCAACCACTGA
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| CDS seq | ATGGCCGCCATGCTCATCTCGCGACGCAGCATCCAGCTCGTCCTCGTCGTCGCCGCCGTGGTCGCCATCGCCGGAGCTGTCCATGCTGCCGCGGGGGAGACGACGGCGACGACGACGCACATCAAGGTGTACTGGCACGACGTGGTGAGCGGGCCGAGCCCGACGGCGGTGCAGGTGGCGAGGGCGGCGACGACCAACTCGTCGGCGAGCTTCTTCGGCGCCGTGGTGGTGATCGACGACCCGCTGACGTCGGGCCCCGACCTGAACGCCTCGTCGCCGGTGGGCCGCGCCCAGGGCACCTACGTCAGCGCCGGCAAGGACACGGTGGCGCTGCTCATGAACATGAACTTCGTCTTCCAGTCCGGCAGGTACAACGGCAGCACCGTCGCCATCATGGGCCGCAACGAGGTCTTCGCCGCCGTCCGCGAGATGGCCGTCGTCGGCGGCACCGGCGTCTTCCGGTGGGCCCGCGGCTACGCCCAGGCCCGGACCCACACCTTCGACATGAAGACCGGCGACGCCACCGTTGAGTACAACCTCTACATCAACCACTGA
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| Protein seq | MAAMLISRRSIQLVLVVAAVVAIAGAVHAAAGETTATTTHIKVYWHDVVSGPSPTAVQVARAATTNSSASFFGAVVVIDDPLTSGPDLNASSPVGRAQGTYVSAGKDTVALLMNMNFVFQSGRYNGSTVAIMGRNEVFAAVREMAVVGGTGVFRWARGYAQARTHTFDMKTGDATVEYNLYINH |
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| Function | Dirigent protein 3 [UniProtKB/Swiss-Prot:Q9FI66] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsZS97_12G0068000 | OsZS97_12T0068000.1 | Chr12 | 3879659 | 3880213 | + | makerRMon | ||
| CDS seq | ATGGCCGCCATGCTCATCTCGCGACGCAGCATCCAGCTCGTCCTCGTCGTCGCCGCCGTGGTCGCCATCGCCGGAGCTGTCCATGCTGCCGCGGGGGAGACGACGGCGACGACGACGCACATCAAGGTGTACTGGCACGACGTGGTGAGCGGGCCGAGCCCGACGGCGGTGCAGGTGGCGAGGGCGGCGACGACCAACTCGTCGGCGAGCTTCTTCGGCGCCGTGGTGGTGATCGACGACCCGCTGACGTCGGGCCCCGACCTGAACGCCTCGTCGCCGGTGGGCCGCGCCCAGGGCACCTACGTCAGCGCCGGCAAGGACACGGTGGCGCTGCTCATGAACATGAACTTCGTCTTCCAGTCCGGCAGGTACAACGGCAGCACCGTCGCCATCATGGGCCGCAACGAGGTCTTCGCCGCCGTCCGCGAGATGGCCGTCGTCGGCGGCACCGGCGTCTTCCGGTGGGCCCGCGGCTACGCCCAGGCCCGGACCCACACCTTCGACATGAAGACCGGCGACGCCACCGTTGAGTACAACCTCTACATCAACCACTGA
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| Protein seq | MAAMLISRRSIQLVLVVAAVVAIAGAVHAAAGETTATTTHIKVYWHDVVSGPSPTAVQVARAATTNSSASFFGAVVVIDDPLTSGPDLNASSPVGRAQGTYVSAGKDTVALLMNMNFVFQSGRYNGSTVAIMGRNEVFAAVREMAVVGGTGVFRWARGYAQARTHTFDMKTGDATVEYNLYINH |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 9.99061 | 3.7146385 | 0.444816 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_12g0174700 | RBH | 0.473119 | 1.410418 | 2.114786 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os12g07580 | RBH | 0.381300 | 0.777822 | 0.837537 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os12g0174700 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_12g0004970 | RBH | 0.000000 | 6.085454 | 5.153719 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_12g0005180 | RBH | 0.000000 | 2.464952 | 0.370547 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_12g0005220 | RBH | 0.000000 | 2.589387 | 3.075948 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_12g0005050 | RBH | 0.000000 | 0.000000 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_12g0005170 | RBH | 0.000000 | 8.645295 | 5.909880 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_12G0063700 | RBH | 11.2069115 | 1.8353855 | 1.836348 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_12g0005150 | RBH | 0.000000 | 0.000000 | 0.411888 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_11G0065600 | SBH | 0 | 6.94162 | 0 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_12g0004960 | RBH | 0.000000 | 0.141125 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_12g0005220 | RBH | 0.000000 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_12g0005170 | RBH | 0.0 | 7.333622 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_12g0005140 | RBH | 0.000000 | 0.0 | 0.571270 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_12g0005110 | RBH | 0.000000 | 4.831598 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_12G004980 | RBH | 0.000000 | 2.066035 | 3.706432 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_12g0005180 | RBH | 0.000000 | 0.000000 | 1.759872 |
