Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsZS97_11G0446100 | OGI:11083610 | 3/16 | Zhenshan 97 | ZS97RS3 | HZAU | Chr11:32012481-32015700 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | ATTATACACAAGTTCCTATAGAAGATACATATAACATGATACTACTACATCTACAAATAAAGATAGAGGGGGAGAAAGAGAAAGAACTCCATCTTCCATAGTTCCATCCAACATCCAGGCAGAGGCAGAGCCATCCTTGGCTTCCCAAAAACTCTCTTTTTTCTCTTCTCCCTTTGGTGGTGCTTCTCCTCCTCCTCCATCCTCTCCTCTTCACCTTGCTTCCTCCCCATCCAAAGCTCACAACTTGACGACACACGCACACGCGCTCCCATGTCCTGTAGCCTCCTCTCCATGTCAAGCCACGCCGCCCCCTCGCCGTCGCAGCCGTGAGACATCCCTCCGCGCCGCGGCGAGACTTCCCCTGTGTCCATGTTCGCCGCTGGTTCTTGATTCGTTCAGGTCTCGTGACAAACTTGCTTCTCCTCCTGATTTAATTTGTCCGGTGCGGGAAGGGAAGCCTCCCTCTGCAGCATGGCGCCGTTGCGCGGGGCCAAGCGCCGGAGGAAGGCGGCGGCGGAGAAGAAGGCTGCAATGGCGGCGGCCGCTGCGGCGGGTGGCGCGCCCGGAGCAGGCGGCGGCGACTGGTGGGACGGCTTCTGCATGCGGATGTCAGGTGCGTGCATCTCTCTGAGTCTGTCTGTCTGTCTGCGGCGGCGGCGGCGGCGGTGGTGGTGGCCGCCGTACGTCTCGGTGAGATTTGTGCAGATTGCGTGGCACGTCGGTGGCTGCTCTGGTGCCGATTTTTTTTTTAGATCTAATTTGCATCGGGTTCGAATTCTTGGAGAGCTGAAGTAATCTTGTGCTTTATCGATCATATCAAGGAGCAGTTATAAACTTGTTATAAATGGTGGTACTGCAATACCACTGTCTGTCTGGTGATGCTGCATTCTGATGGATGGACAGCCACTTTAGTCTTAGGATTTGTTTAGGACACCTGCTGCTGTTGCTGCATTATATCAGTTCCGAATCGTAGAGAATTTTGAGCTATCAATTCAGATCAATCGATTATTCTGATTACTATCAGCAAGTTGATATGCTCGTGCAGTTATCATGTCTAGCAAATCGAGTATGGTTTCAGAGCAAATGCAGGCTGCAGACACCATGAAATTGAAAGATAATTGCTTGTTTAATTACTGATGCTAGTCATTGCTTCTTCTGTATGTTCCCATTTTCCAAGCTAAATGTGAGAGAATAATTCCTGTCACAGTAGATGTGTTCTGCACTTCTGTATTGGCTATATGGAAAGCTCCTGATCAGTCCATAAAAAGGCGAGATGTACTATAGCTACTCTTCCTCTAAGTATGTCGTGCTAGTTGCAGATCATGAAGTTATACATGTGATCCAACCATATGCAGCACCAAAGCAACTGTTGTTCTAAACAATAGCCAGAATTGGTTTCGAACTCTTTCTAGATGGTAGGGGAGTTACATTTTTTTTTGGAGGACCAAATTACTGCAGGGATAGCCCCCACAGTATTGTGGTACCATTTTCTTCCAAGTTGCAAAGTTTCTTTAGTCCTGATTTGGTGGTTTAGTAATATCACATTGAGAGAAGCACATCTTCCGCAAAAGGGTAGTATTGATTTTTCTGACTATCTTCAGACTTCAGCGAAGGGAGATGGATTCTAAGTTATTACATATATCTAAACGCAAGCAACCAAAAGACTTAGGAACTTACATATACTATTATTCAATGATTGAGCTTTCTGCTAGTTGTATTTGTTCAATTAACTGCAAACAAGTTTGTAAAATAGCTTGATGTTTATCCAAATCGCAACATATACTGACCATTTTTTATTTCCTTTTCAGGAACCTTGTCTGGTATACAGGATGCACAAAGATTTGAGTTTATCTTCAAAATGCCAAGGAGAACCTTCAACTACATCTGTGGTTTGGTGAGAGATGAAATGATGGTGAGGTCTAGCAGCTATACCTTTCTTGATGGGAAGGTGCTGTCTTTAGAAGATCGGGTGGCGGTGGCTCTGATAAGGTTGAATTCTGGCGGATCACTAGTGACTGTAGGATCTGCTGTTGGTGTAAACCACTCAACCGTGTCACTGATAACTTGGAGGTTTGTTGAGGCTATGGAGGAGCGAGCAAGCCACCATTTGCGGTGGCCAGATTCCAGTGAAGTGGAGAAGATCAAATCCATGTTTGAGAAGATACATGGTTTGCCAAACTGCTGCGGTGTTGTAGACACAACACATATCACAATGTGCCTTTCTTCAGCTGAGCCAAACTGTAAGGTCTGGCTAGACCATGAGAAAAATTACAGCATGGTCTTGCAAGCTGTTATCAGTCCAGATATGAGGTTCATGGACATTGTGACAGGGTGGCCTGGTAGCATGAAAGAGTCGAGCATTTTGCATAGCTCTGGTCTTTTCAAGATGTGCGAGAAAGGAGCACGGCTTAACGGCAGCAAGATGGTAGTGTCTGATGGGTCAGAAATTGGTGAATACATAATTGGTGATGCAGGATACCCCCTTCTTCCCTGGCTTCTCACACCGTACCAAGAAAAGGACCTCTCAGATTCTAAGCTGGAGTTCAATAAGAGACACGCAGCGGCCATAACAGTTGCTCCAAGGACATTGGCGAACTTCAAGGACACATGGAAATTCCTGCATGGCGAGATGTGGCGCCCCGACAAGCACAGGCTGCCTCGGATAATCCATGTGTGCTGCATGCTGCACAACTTAATCATATGCCTTCAGGATGCAACCATCGACGAGGCAGCCATGTCGAACGATCACGACGCGAATTACAAGCAGCAGGTGTGCCAGTTAGCAGATGAGAATGCTGTGAGGGTGAGGGACAAACTGTCTGAGCACTTGGTCAGCAGGTGAGGACAAGAGAAGAAAGAGGGTGTGGATGTCCTGAAGAAACTGAACCTTCTTAGTCTGCTGCAGCCTGCAGCTGAGTCTTTTAGCTGTGAGTTTCAGTTTTGATGAGTTTGTTTATTTCTTTTAGGGGAGAAAGGGGTAGTGCTAAACTGCTAATTAGTCGGTCAGTTGTGACAAATGAAAACCCAACTGTAACCGTAGAGCTCTCCAGCTCGCCCCTGTGATGTGAATTACATTTGATTACTTTTGTTCTGAATGAAAAATATCATACAGATCAAAGCTAAAGTTGAACTGCGGAAACTATCTATGAAATCATTGGCATGATTAATATTTGTGATGAACAATTAGCTTTGCAAATGATTTAATCAATGAATTTGTTTG
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| CDS seq | ATGGAAGCCTCCCTCTGCAGCATGGCGCCGTTGCGCGGGGCCAAGCGCCGGAGGAAGGCGGCGGCGGAGAAGAAGGCTGCAATGGCGGCGGCCGCTGCGGCGGGTGGCGCGCCCGGAGCAGGCGGCGGCGACTGGTGGGACGGCTTCTGCATGCGGATGTCAGGAACCTTGTCTGGTATACAGGATGCACAAAGATTTGAGTTTATCTTCAAAATGCCAAGGAGAACCTTCAACTACATCTGTGGTTTGGTGAGAGATGAAATGATGGTGAGGTCTAGCAGCTATACCTTTCTTGATGGGAAGGTGCTGTCTTTAGAAGATCGGGTGGCGGTGGCTCTGATAAGGTTGAATTCTGGCGGATCACTAGTGACTGTAGGATCTGCTGTTGGTGTAAACCACTCAACCGTGTCACTGATAACTTGGAGGTTTGTTGAGGCTATGGAGGAGCGAGCAAGCCACCATTTGCGGTGGCCAGATTCCAGTGAAGTGGAGAAGATCAAATCCATGTTTGAGAAGATACATGGTTTGCCAAACTGCTGCGGTGTTGTAGACACAACACATATCACAATGTGCCTTTCTTCAGCTGAGCCAAACTGTAAGGTCTGGCTAGACCATGAGAAAAATTACAGCATGGTCTTGCAAGCTGTTATCAGTCCAGATATGAGGTTCATGGACATTGTGACAGGGTGGCCTGGTAGCATGAAAGAGTCGAGCATTTTGCATAGCTCTGGTCTTTTCAAGATGTGCGAGAAAGGAGCACGGCTTAACGGCAGCAAGATGGTAGTGTCTGATGGGTCAGAAATTGGTGAATACATAATTGGTGATGCAGGATACCCCCTTCTTCCCTGGCTTCTCACACCGTACCAAGAAAAGGACCTCTCAGATTCTAAGCTGGAGTTCAATAAGAGACACGCAGCGGCCATAACAGTTGCTCCAAGGACATTGGCGAACTTCAAGGACACATGGAAATTCCTGCATGGCGAGATGTGGCGCCCCGACAAGCACAGGCTGCCTCGGATAATCCATGTGTGCTGCATGCTGCACAACTTAATCATATGCCTTCAGGATGCAACCATCGACGAGGCAGCCATGTCGAACGATCACGACGCGAATTACAAGCAGCAGGTGTGCCAGTTAGCAGATGAGAATGCTGTGAGGGTGAGGGACAAACTGTCTGAGCACTTGGTCAGCAGGTGA
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| Protein seq | MEASLCSMAPLRGAKRRRKAAAEKKAAMAAAAAAGGAPGAGGGDWWDGFCMRMSGTLSGIQDAQRFEFIFKMPRRTFNYICGLVRDEMMVRSSSYTFLDGKVLSLEDRVAVALIRLNSGGSLVTVGSAVGVNHSTVSLITWRFVEAMEERASHHLRWPDSSEVEKIKSMFEKIHGLPNCCGVVDTTHITMCLSSAEPNCKVWLDHEKNYSMVLQAVISPDMRFMDIVTGWPGSMKESSILHSSGLFKMCEKGARLNGSKMVVSDGSEIGEYIIGDAGYPLLPWLLTPYQEKDLSDSKLEFNKRHAAAITVAPRTLANFKDTWKFLHGEMWRPDKHRLPRIIHVCCMLHNLIICLQDATIDEAAMSNDHDANYKQQVCQLADENAVRVRDKLSEHLVSR |
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| Function | Protein ALP1-like [UniProtKB/Swiss-Prot:Q9M2U3] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsZS97_11G0446100 | OsZS97_11T0446100.1 | Chr11 | 32012481 | 32015700 | + | makerRMon | ||
| CDS seq | ATGGCGCCGTTGCGCGGGGCCAAGCGCCGGAGGAAGGCGGCGGCGGAGAAGAAGGCTGCAATGGCGGCGGCCGCTGCGGCGGGTGGCGCGCCCGGAGCAGGCGGCGGCGACTGGTGGGACGGCTTCTGCATGCGGATGTCAGGAACCTTGTCTGGTATACAGGATGCACAAAGATTTGAGTTTATCTTCAAAATGCCAAGGAGAACCTTCAACTACATCTGTGGTTTGGTGAGAGATGAAATGATGGTGAGGTCTAGCAGCTATACCTTTCTTGATGGGAAGGTGCTGTCTTTAGAAGATCGGGTGGCGGTGGCTCTGATAAGGTTGAATTCTGGCGGATCACTAGTGACTGTAGGATCTGCTGTTGGTGTAAACCACTCAACCGTGTCACTGATAACTTGGAGGTTTGTTGAGGCTATGGAGGAGCGAGCAAGCCACCATTTGCGGTGGCCAGATTCCAGTGAAGTGGAGAAGATCAAATCCATGTTTGAGAAGATACATGGTTTGCCAAACTGCTGCGGTGTTGTAGACACAACACATATCACAATGTGCCTTTCTTCAGCTGAGCCAAACTGTAAGGTCTGGCTAGACCATGAGAAAAATTACAGCATGGTCTTGCAAGCTGTTATCAGTCCAGATATGAGGTTCATGGACATTGTGACAGGGTGGCCTGGTAGCATGAAAGAGTCGAGCATTTTGCATAGCTCTGGTCTTTTCAAGATGTGCGAGAAAGGAGCACGGCTTAACGGCAGCAAGATGGTAGTGTCTGATGGGTCAGAAATTGGTGAATACATAATTGGTGATGCAGGATACCCCCTTCTTCCCTGGCTTCTCACACCGTACCAAGAAAAGGACCTCTCAGATTCTAAGCTGGAGTTCAATAAGAGACACGCAGCGGCCATAACAGTTGCTCCAAGGACATTGGCGAACTTCAAGGACACATGGAAATTCCTGCATGGCGAGATGTGGCGCCCCGACAAGCACAGGCTGCCTCGGATAATCCATGTGTGCTGCATGCTGCACAACTTAATCATATGCCTTCAGGATGCAACCATCGACGAGGCAGCCATGTCGAACGATCACGACGCGAATTACAAGCAGCAGGTGTGCCAGTTAGCAGATGAGAATGCTGTGAGGGTGAGGGACAAACTGTCTGAGCACTTGGTCAGCAGGTGA
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| Protein seq | MAPLRGAKRRRKAAAEKKAAMAAAAAAGGAPGAGGGDWWDGFCMRMSGTLSGIQDAQRFEFIFKMPRRTFNYICGLVRDEMMVRSSSYTFLDGKVLSLEDRVAVALIRLNSGGSLVTVGSAVGVNHSTVSLITWRFVEAMEERASHHLRWPDSSEVEKIKSMFEKIHGLPNCCGVVDTTHITMCLSSAEPNCKVWLDHEKNYSMVLQAVISPDMRFMDIVTGWPGSMKESSILHSSGLFKMCEKGARLNGSKMVVSDGSEIGEYIIGDAGYPLLPWLLTPYQEKDLSDSKLEFNKRHAAAITVAPRTLANFKDTWKFLHGEMWRPDKHRLPRIIHVCCMLHNLIICLQDATIDEAAMSNDHDANYKQQVCQLADENAVRVRDKLSEHLVSR
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsZS97_11G0446100 | OsZS97_11T0446100.2 | Chr11 | 32012481 | 32015700 | + | makerRMon | ||
| CDS seq | ATGGAAGCCTCCCTCTGCAGCATGGCGCCGTTGCGCGGGGCCAAGCGCCGGAGGAAGGCGGCGGCGGAGAAGAAGGCTGCAATGGCGGCGGCCGCTGCGGCGGGTGGCGCGCCCGGAGCAGGCGGCGGCGACTGGTGGGACGGCTTCTGCATGCGGATGTCAGGAACCTTGTCTGGTATACAGGATGCACAAAGATTTGAGTTTATCTTCAAAATGCCAAGGAGAACCTTCAACTACATCTGTGGTTTGGTGAGAGATGAAATGATGGTGAGGTCTAGCAGCTATACCTTTCTTGATGGGAAGGTGCTGTCTTTAGAAGATCGGGTGGCGGTGGCTCTGATAAGGTTGAATTCTGGCGGATCACTAGTGACTGTAGGATCTGCTGTTGGTGTAAACCACTCAACCGTGTCACTGATAACTTGGAGGTTTGTTGAGGCTATGGAGGAGCGAGCAAGCCACCATTTGCGGTGGCCAGATTCCAGTGAAGTGGAGAAGATCAAATCCATGTTTGAGAAGATACATGGTTTGCCAAACTGCTGCGGTGTTGTAGACACAACACATATCACAATGTGCCTTTCTTCAGCTGAGCCAAACTGTAAGGTCTGGCTAGACCATGAGAAAAATTACAGCATGGTCTTGCAAGCTGTTATCAGTCCAGATATGAGGTTCATGGACATTGTGACAGGGTGGCCTGGTAGCATGAAAGAGTCGAGCATTTTGCATAGCTCTGGTCTTTTCAAGATGTGCGAGAAAGGAGCACGGCTTAACGGCAGCAAGATGGTAGTGTCTGATGGGTCAGAAATTGGTGAATACATAATTGGTGATGCAGGATACCCCCTTCTTCCCTGGCTTCTCACACCGTACCAAGAAAAGGACCTCTCAGATTCTAAGCTGGAGTTCAATAAGAGACACGCAGCGGCCATAACAGTTGCTCCAAGGACATTGGCGAACTTCAAGGACACATGGAAATTCCTGCATGGCGAGATGTGGCGCCCCGACAAGCACAGGCTGCCTCGGATAATCCATGTGTGCTGCATGCTGCACAACTTAATCATATGCCTTCAGGATGCAACCATCGACGAGGCAGCCATGTCGAACGATCACGACGCGAATTACAAGCAGCAGGTGTGCCAGTTAGCAGATGAGAATGCTGTGAGGGTGAGGGACAAACTGTCTGAGCACTTGGTCAGCAGGTGA
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| Protein seq | MEASLCSMAPLRGAKRRRKAAAEKKAAMAAAAAAGGAPGAGGGDWWDGFCMRMSGTLSGIQDAQRFEFIFKMPRRTFNYICGLVRDEMMVRSSSYTFLDGKVLSLEDRVAVALIRLNSGGSLVTVGSAVGVNHSTVSLITWRFVEAMEERASHHLRWPDSSEVEKIKSMFEKIHGLPNCCGVVDTTHITMCLSSAEPNCKVWLDHEKNYSMVLQAVISPDMRFMDIVTGWPGSMKESSILHSSGLFKMCEKGARLNGSKMVVSDGSEIGEYIIGDAGYPLLPWLLTPYQEKDLSDSKLEFNKRHAAAITVAPRTLANFKDTWKFLHGEMWRPDKHRLPRIIHVCCMLHNLIICLQDATIDEAAMSNDHDANYKQQVCQLADENAVRVRDKLSEHLVSR
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 2.715432 | 1.900538 | 11.026827 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_11g0702700 | RBH | 0.000000 | 0.0 | 1.249015 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os11g47650 | RBH | 0.000000 | 0.0 | 0.321521 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os11g0702700 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_11G0450300 | RBH | 1.617421 | 2.082239 | 1.412733 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Zhenshan 97 | ZS97RS3 | HZAU | NA | NA | NA | NA | NA |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
