Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsZS97_11G0436300 | OGI:11081610 | 16/16 | Zhenshan 97 | ZS97RS3 | HZAU | Chr11:31075894-31081425 | ||||||||
| Gene Symbol | WRKY41, OsWRKY41 | ||||||||||
| DNA seq | TCACTCGCCCCCGAACCACACCGGAGCATCGTCTCCTCCTTTGACCCAAAGGAAGTCGCCGCCGCTCCCAAGCCATTGACCTTCACATGCGCACCTGCATGTGCCTCCTATCAGTTACCAGTAACAGGCCCTATGGTGACCATCCTCTCCGGGTGCTACTCGTCATCCGCCGCCACTACCACCCGCGCCGAGCAACATGAGGCGCGAGTGAGAAGAGCTAGAGAGACAGAAGAAAGAAGGAAGAAGGAAAGAAGAGGATGACCAAATGGGCCGCCCGGCCCGGCACGGTCCAGGCACGATCGGGCCTAGGCCGAGGTTAGTCGGGCCAGCCCGGCCTGACCTACATGCTGCGTCGGGCCGTGCCAGCTCACGAGCTGCACCAACGGCCCAAGCATGACCCAATAAGACTCGGGCTGTGCCGGGCCGGCCCGAAGGCATGACGGTCCATCGTGCCTCTTCATAAAATAAGTCTAGTTTCCTCCCTCATATCTTTGGGCTGTCTTATATGGATAGAATAAGTCTATTTTGTATCCCTCTTCTCTTCGGGCCGTGCCTTATATAGCTGGATTAAGTCTATTATGGATCCCTCAACTATTCTATTTTCCTTGGTCGTGTCGTGCCAGACCGGCCCACCGTGCCAAGGCATCGGCCCAGGCACGACCCAATTGTCAGGGCGGGCCGGCACGGGCACGACAACAGTCGTGTCGTGCCATGCTTGGGGCGGGCCAAATGGCTGTGCCGTGGGCCGAGCCGTCGGGCCTCGAATCAAACCTTTTGATTTTGTATGGGGTAAAAGGATTTAACCCAATTTTCAAGCACCCACTCGTTGAAATTTACATGTAATATGATAAAAATATTAGAGATATTGGGCCTGTTTGGCACAGCTCCAGCTCCAACTCCACTTCTTCTGGAGCTGGAGCTCAGTCAAACAGTTTCAGCTCCACCTAAAATGGGAGCGGAGCTGGCTGGAGCTCTCTCACAAAATGAACTAGAGAGGTGGAGCTGGGTTTAGGCAGCTCCACAACTCCACTCCAGACCCAACTCCTGGAGCAAAATTTAGGAGTTGGGGCTCTACCAAACAGGCCCATTATCTATTATCTATAGAACTTAATTCTTGGTTCCACCACTAGACCCTTTCCCTTTCTCCGGGTTAAATATTAGGAATTTCTAGCGAGCAAATAAGTAGATGAATCTCACTTGATAGACAAAGTTATATTATAGGACAAGCTCATGAAATGGAAATGGGGAATTCCCACACATCTTAGGAAAAGAAGAGCATGCAAGTTCTTGCACCATTTTAGAGAGAGAAAGAGACTGGGCATTAGCATATCCAAAATTGTTGTTTTAGGATCATGCATGCATTGATTAATAGCCCTAGATAATGTTTACTGCAAACTGAAAGTAATGGGAGTTAATTAAGATTGAAGGCATGTTTTGTGATTTGTAGGCTAAGATCAAGTTGAATTGATTGAATTTAAACATTTTTTGTATTTGTGTGCCCGGAGACTATTGGACTTTGCTCTTGAGATGTGTATGGGCACGCTAGTGAAAATATCTTGGGTCTGATACTAAGTCAGTCAAGAAATGATGTGTTTGAGTCAAGAAGACTGACAATGTGGCGTTGCTCAAAATAAATTGGCAATGTTTTATTAAGGGCTAGAGTACTCTTAGTATGACAAATTAATCCATACCTTCTGTCAGCAGATTTCTGTGCTGCTTCCCCAGGGTCCATTTGTAGAACTGCAGATGTCTCACTTGAGCTTTCTTTCATGATATGTTGTTTTTGCAGGGTCCTAAGTTCTTCCTCGAGTGTCTCGACATTGTCATCATCTATACCATAAAAAAAGGTCCAATCTACACAATGTATCTTGACGCTAGGATGTCCTGGATGCATCCTAATGGCGTTAGTCACAGCTGACTCTGCAAATCTTCTACAAAGATCATCAGTGGTACAGGCGACCCTAATTTTTGCAGAGATCTCTTCAAGTACTGACAAATGTTCGATTCCAACAGGAATAATATCATACTGATCTGCTCTGTACACATCAAAACCTAGCTTGAGCTTCCGGAGATTAGGCATTGCGCCCACCTCAAATTTCATCCATGCTACGATGCATCGGAACTTGAAGTATTTGAGGATCGAAAACCCTACATTGTCAAAGACGATCCTTTCTGTAGGCTTCGTGAGGACATATAGTGACAAAGCAGCGAGTGCTGGTAATCCTCTGAGAACAACAACATCATTACTGGTTACTTCCCTAGTCCCAATCTTTAAAATGCAGAGATTTCGAAGCTGCCCAATCCAATTCGGGAGGCCAGAAAAGATGCAAACACCTGGTAACAACTCAAGCCTCTGAAGAAGGGATGGTACAGAGGACATGCTGCTCCAGCCATCAACAAAGATTCTACAACCGCTGTCAATATGCATATTACTGGCATAAGAAGAGCCTGCAGGTGATAGAGTTATAGACTTGAGGTTACCGAGTTTCCCTAGAATGGATCCAAGGCACTGCATATTATTCTTCAAGATGTCAGAATGTACAGCAGAATAGGTGAGTTGAAGATCCCGGAGATTGGTCAGCTGGCCAAGGCTCTGCAGATTCTCTTCTGAGTTACAGCTGAGATCAAAATATCCAAGTGTACAGAGCGATGTCATGTGGACAATTCCACTGGGCAGGTTTGTCTTTGCAGGAAGACTAAGATTCAGCAAGCCTGGCAAATGAATAATGTCTGATGGAATTGCACCTATTTTTCCATCTATTTTCAGTGTCTCCAAATATTGTAGACCTTGTATCTTGGTTGGCAGTTTTAAGGTGACATTAGAGGTAACCTTCAAATATCTCAGCCGGACAAGTTCTGAAATTTTAGTGAGATCAAAAATGCCGATGATATTCTCATCACCCAAGAAATTTAGAACTAGAACTTTAATAAGTCGAAACTCCATAATTGAAGGCATATACTTCAAGACCCCAAAAAAGGCAACTGTCCGAACTTGGGACAATCTCATATTAGTAGGTGGAGTTGCATCTTCTACATTACCGAAGTGAATAGATAATCGTCGAATCTTGTCAGAAAATCTTACAGTTGTCTGTGAATGGTCTATTGCAACAATAAAATTTTCTTCTATTGACTTGTATGTAACAAAATTGAGTACCATATGGTGAACTACACAGGACAAAACCTCACCGCTGTCATCGATATGTACAGGCTGGATGATTTTTCTACCAACAAGCTCACCAAAATAGGCCCTTGAAATTTCTTCCTTGTCATACTCTTCAGCTGCACGGATAAAACCTTCAGCTATCCATTGACTCACTAAATCATCCTTCCAAATTATGTGATCTCCTTGATACATACTAAGATACAACATGCATGCCTTCAAATGCTGAGGAAGATTGTTGTAAGAAAGCTTCAGTAGTTGTTTCATCCCTTCCAAAGTTGGATTTGCCATCAAACTGTAACCTAAGGATTTGTTTATATAATCCCATTGTTCTTGTTTCTCAAGCTGGCTTGCTAAAAGACTTGCAACAGTGACAATAGCTAGCGGCAAACCACCACATTTCCTTACAATGTCATATAATGTTTCACTGACTTCTGGAGGACACCTAGAATGAGAGCCAAAGACTATACTGAAAAATAGTTTTCTTGAGTCACCCTCACCAAAAGGTTTCATCTTGAAGATAAATTTCAAGTCATAACTACAAGACTGCAAAGCTAGATCCTCAATTTCTGTTGTGGTTAGTATTCTGCTAGAACTATTACCATCCGGCAAAGCACACTTAATAACATCCCATGTGGATGTAGCCCATAAATCATCAATTATGATCAAGTACCTGCGATTAAGGGGAGAATTTTTGACATAACTGAATGGTAGCTCCACTTGTTGTTAATATTCTGCTAGAATTTGCATGATGAAATGGTAAACATTAGGTGCAAGATGGATTTTCTCTCGATTTTGTACACTATGCAACTTATAACAGCCATCTTGAGGCTATAAATGATTAAAAGACATGGCTTGATGCCTTGATCCAACAAAAAAACTATTATAACTCATAGATTGGGCCTATGAGTGTGGGAGGGGAGGAGGTTGAATAAGCATATAGCACTAATTGTGGCTAAGGCTGATATTAGGGATAGCAAGCAACAGACACACCCTGCTATTGTTATGTTACACATTACATATAATTTAGTAGTATAGACTTCAGAGGAGGCGGTATCTGTCTTTCTTATCTATCTGCCATAATTCAATGAAATATTGAACCCATGTATTAAATAGTTGACTAAAAATTTCTATTTATACTTATGAAGATAACTTTAGTATCAGTATAACAGCCAAATAAACTGATTAACGATTAGTAGCAAACAGAAACAAAAACAAGGAATAAGTCGGTTTCACACCCCGAAAACATTGTACGTACCTCTTATCTTGCAGATGTGTCCTGATACTGGAAATTAGGCTATGCACCTTCCCATTGTCTGGTGACTGGTGTGGCCGAACCTGTGAGAGGATATTGATGAGAAGCCTCCTCATATCAGTCTTCTGGGATGTCCGCACAAATGCCCGACACTCGAACTGCCACCGAAGCTTGCGGTACAGCTTGTTGGCAAGCGTAGTCTTGCCAACTCCTCCAACTCCCACGATGGACACCACCTTGAGTTTCTCTTCTCCACACACATCGAGCAAGTTTTCAAGCTTGTTCATGGCGGCGTCAATGCCAACATGACAGATGGATTCCATGAACCGCGTGGGTTGCCTAGATGAGGTAGGAGATACATCACCTCTACTAGTAGTAGTAGTGGTGATGCCAGGGAGTATGTTTTTGAGCTTGTTCAGGACGGCTTCCATATCGGTGTGGATACCAAGGACTTTGTCGCCATTCTCCCTGAACTGCACGAGAGAAGCAGTCGGGATGCCAGCAAGCAAGTTTTTGAGCTTGTTCAGGTCATTCAGGGCAGCTTCCATACCGTCGGCGTCTATACTGACAGAACGGACGTTGTCGACATGCTCTTGAGTTGTGTGTGTCTGGGATACCAAGGTGTGGCAGAGAATACATCTCCACTAGTAGTAGCAGCAGTACGAGCGATGCCACCGAGGTTGTTGTACATGGCATGGCGTTGAAGCGCCTCCTGGGTGCGCAGGCTGAATTCTCTGATCTTGTTGGCCATCCACAACCGCTGCTTCAGTTTCTGGGGAACCCAAGGGATCTTGTTTCCACGCCGCCGATTGAACTTATAGTGACGAATATTAGGTCCAGTACGTGACAGGGTGGTAGTGGCGGCATGCTCGTACTGGTCGATGCAATCCTCGATGTCATAAGAGAGCTCACGTGCCTCCTTCATCCAGAACCTGACCACCATGGCATGGTCCTCCAGCTTTGGCTCGCTACAGTGACCATGGAGGATAGAGATTATTTCCTCGAGATCTTGCTTGATGAGCGGTATCTCCTCCTCTGCCCCCTTGGGCAGAATGCTGCCATGACGAAGCTGGAGCCCGTCGAGCCTTCCTGGGAGGTTGAACATGGCGCCCTCCAT
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| CDS seq | ATGGAGGGCGCCATGTTCAACCTCCCAGGAAGGCTCGACGGGCTCCAGCTTCGTCATGGCAGCATTCTGCCCAAGGGGGCAGAGGAGGAGATACCGCTCATCAAGCAAGATCTCGAGGAAATAATCTCTATCCTCCATGGTCACTGTAGCGAGCCAAAGCTGGAGGACCATGCCATGGTGGTCAGGTTCTGGATGAAGGAGGCACGTGAGCTCTCTTATGACATCGAGGATTGCATCGACCAGTACGAGCATGCCGCCACTACCACCCTGTCACGTACTGGACCTAATATTCGTCACTATAAGTTCAATCGGCGGCGTGGAAACAAGATCCCTTGGGTTCCCCAGAAACTGAAGCAGCGGTTGTGGATGGCCAACAAGATCAGAGAATTCAGCCTGCGCACCCAGGAGGCGCTTCAACGCCATGCCATGTACAACAACCTCGGTGGCATCGCTCGTACTGCTGCTACTACTAGTGGAGATGTATTCTCTGCCACACCTTGGTACTTGATCATAATTGATGATTTATGGGCTACATCCACATGGGATGTTATTAAGTGTGCTTTGCCGGATGGTAATAGTTCTAGCAGAATACTAACCACAACAGAAATTGAGGATCTAGCTTTGCAGTCTTGTAGTTATGACTTGAAATTTATCTTCAAGATGAAACCTTTTGGTGAGGGTGACTCAAGAAAACTATTTTTCAGTATAGTCTTTGGCTCTCATTCTAGGTGTCCTCCAGAAGTCAGTGAAACATTATATGACATTGTAAGGAAATGTGGTGGTTTGCCGCTAGCTATTGTCACTGTTGCAAGTCTTTTAGCAAGCCAGCTTGAGAAACAAGAACAATGGGATTATATAAACAAATCCTTAGGTTACAGTTTGATGGCAAATCCAACTTTGGAAGGGATGAAACAACTACTGAAGCTTTCTTACAACAATCTTCCTCAGCATTTGAAGGCATGCATGTTGTATCTTAGTATGTATCAAGGAGATCACATAATTTGGAAGGATGATTTAGTGAGTCAATGGATAGCTGAAGGTTTTATCCGTGCAGCTGAAGAGTATGACAAGGAAGAAATTTCAAGGGCCTATTTTGGTGAGCTTGTTGGTAGAAAAATCATCCAGCCTGTACATATCGATGACAGCGGTGAGGTTTTGTCCTGTGTAGTTCACCATATGGTACTCAATTTTGTTACATACAAGTCAATAGAAGAAAATTTTATTGTTGCAATAGACCATTCACAGACAACTGTAAGATTTTCTGACAAGATTCGACGATTATCTATTCACTTCGGTAATGTAGAAGATGCAACTCCACCTACTAATATGAGATTGTCCCAAGTTCGGACAGTTGCCTTTTTTGGGGTCTTGAAGTATATGCCTTCAATTATGGAGTTTCGACTTATTAAAGTTCTAGTTCTAAATTTCTTGGGTGATGAGAATATCATCGGCATTTTTGATCTCACTAAAATTTCAGAACTTGTCCGGCTGAGATATTTGAAGGTTACCTCTAATGTCACCTTAAAACTGCCAACCAAGATACAAGGTCTACAATATTTGGAGACACTGAAAATAGATGGAAAAATAGGTGCAATTCCATCAGACATTATTCATTTGCCAGGCTTGCTGAATCTTAGTCTTCCTGCAAAGACAAACCTGCCCAGTGGAATTGTCCACATGACATCGCTCTGTACACTTGGATATTTTGATCTCAGCTGTAACTCAGAAGAGAATCTGCAGAGCCTTGGCCAGCTGACCAATCTCCGGGATCTTCAACTCACCTATTCTGCTGTACATTCTGACATCTTGAAGAATAATATGCAGTGCCTTGGATCCATTCTAGGGAAACTCGGTAACCTCAAGTCTATAACTCTATCACCTGCAGGCTCTTCTTATGCCAGTAATATGCATATTGACAGCGGTTGTAGAATCTTTGTTGATGGCTGGAGCAGCATGTCCTCTGTACCATCCCTTCTTCAGAGGCTTGAGTTGTTACCAGGTGTTTGCATCTTTTCTGGCCTCCCGAATTGGATTGGGCAGCTTCGAAATCTCTGCATTTTAAAGATTGGGACTAGGGAAGTAACCAGTAATGATGTTGTTGTTCTCAGAGGATTACCAGCACTCGCTGCTTTGTCACTATATGTCCTCACGAAGCCTACAGAAAGGATCGTCTTTGACAATGTAGGGTTTTCGATCCTCAAATACTTCAAGTTCCGATGCATCGTAGCATGGATGAAATTTGAGGTGGGCGCAATGCCTAATCTCCGGAAGCTCAAGCTAGGTTTTGATGTGTACAGAGCAGATCAGTATGATATTATTCCTGTTGGAATCGAACATTTGTCAGTACTTGAAGAGATCTCTGCAAAAATTAGGGTCGCCTGTACCACTGATGATCTTTGTAGAAGATTTGCAGAGTCAGCTGTGACTAACGCCATTAGGATGCATCCAGGACATCCTAGCGTCAAGATACATTGTGTAGATTGGACCTTTTTTTATGGTATAGATGATGACAATGTCGAGACACTCGAGGAAGAACTTAGGACCCTGCAAAAACAACATATCATGAAAGAAAGCTCAAGTGAGACATCTGCAGTTCTACAAATGGACCCTGGGGAAGCAGCACAGAAATCTGCTGACAGAAGGTGCGCATGTGAAGGTCAATGGCTTGGGAGCGGCGGCGACTTCCTTTGGGTCAAAGGAGGAGACGATGCTCCGGTGTGGTTCGGGGGCGAGTGA
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| Protein seq | MEGAMFNLPGRLDGLQLRHGSILPKGAEEEIPLIKQDLEEIISILHGHCSEPKLEDHAMVVRFWMKEARELSYDIEDCIDQYEHAATTTLSRTGPNIRHYKFNRRRGNKIPWVPQKLKQRLWMANKIREFSLRTQEALQRHAMYNNLGGIARTAATTSGDVFSATPWYLIIIDDLWATSTWDVIKCALPDGNSSSRILTTTEIEDLALQSCSYDLKFIFKMKPFGEGDSRKLFFSIVFGSHSRCPPEVSETLYDIVRKCGGLPLAIVTVASLLASQLEKQEQWDYINKSLGYSLMANPTLEGMKQLLKLSYNNLPQHLKACMLYLSMYQGDHIIWKDDLVSQWIAEGFIRAAEEYDKEEISRAYFGELVGRKIIQPVHIDDSGEVLSCVVHHMVLNFVTYKSIEENFIVAIDHSQTTVRFSDKIRRLSIHFGNVEDATPPTNMRLSQVRTVAFFGVLKYMPSIMEFRLIKVLVLNFLGDENIIGIFDLTKISELVRLRYLKVTSNVTLKLPTKIQGLQYLETLKIDGKIGAIPSDIIHLPGLLNLSLPAKTNLPSGIVHMTSLCTLGYFDLSCNSEENLQSLGQLTNLRDLQLTYSAVHSDILKNNMQCLGSILGKLGNLKSITLSPAGSSYASNMHIDSGCRIFVDGWSSMSSVPSLLQRLELLPGVCIFSGLPNWIGQLRNLCILKIGTREVTSNDVVVLRGLPALAALSLYVLTKPTERIVFDNVGFSILKYFKFRCIVAWMKFEVGAMPNLRKLKLGFDVYRADQYDIIPVGIEHLSVLEEISAKIRVACTTDDLCRRFAESAVTNAIRMHPGHPSVKIHCVDWTFFYGIDDDNVETLEEELRTLQKQHIMKESSSETSAVLQMDPGEAAQKSADRRCACEGQWLGSGGDFLWVKGGDDAPVWFGGE |
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| Function | Disease resistance protein RGA5 [UniProtKB/Swiss-Prot:F7J0N2] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsZS97_11G0436300 | OsZS97_11T0436300.1 | Chr11 | 31075894 | 31081425 | - | makerRMon | ||
| CDS seq | ATGGAGGGCGCCATGTTCAACCTCCCAGGAAGGCTCGACGGGCTCCAGCTTCGTCATGGCAGCATTCTGCCCAAGGGGGCAGAGGAGGAGATACCGCTCATCAAGCAAGATCTCGAGGAAATAATCTCTATCCTCCATGGTCACTGTAGCGAGCCAAAGCTGGAGGACCATGCCATGGTGGTCAGGTTCTGGATGAAGGAGGCACGTGAGCTCTCTTATGACATCGAGGATTGCATCGACCAGTACGAGCATGCCGCCACTACCACCCTGTCACGTACTGGACCTAATATTCGTCACTATAAGTTCAATCGGCGGCGTGGAAACAAGATCCCTTGGGTTCCCCAGAAACTGAAGCAGCGGTTGTGGATGGCCAACAAGATCAGAGAATTCAGCCTGCGCACCCAGGAGGCGCTTCAACGCCATGCCATGTACAACAACCTCGGTGGCATCGCTCGTACTGCTGCTACTACTAGTGGAGATGTATTCTCTGCCACACCTTGGTACTTGATCATAATTGATGATTTATGGGCTACATCCACATGGGATGTTATTAAGTGTGCTTTGCCGGATGGTAATAGTTCTAGCAGAATACTAACCACAACAGAAATTGAGGATCTAGCTTTGCAGTCTTGTAGTTATGACTTGAAATTTATCTTCAAGATGAAACCTTTTGGTGAGGGTGACTCAAGAAAACTATTTTTCAGTATAGTCTTTGGCTCTCATTCTAGGTGTCCTCCAGAAGTCAGTGAAACATTATATGACATTGTAAGGAAATGTGGTGGTTTGCCGCTAGCTATTGTCACTGTTGCAAGTCTTTTAGCAAGCCAGCTTGAGAAACAAGAACAATGGGATTATATAAACAAATCCTTAGGTTACAGTTTGATGGCAAATCCAACTTTGGAAGGGATGAAACAACTACTGAAGCTTTCTTACAACAATCTTCCTCAGCATTTGAAGGCATGCATGTTGTATCTTAGTATGTATCAAGGAGATCACATAATTTGGAAGGATGATTTAGTGAGTCAATGGATAGCTGAAGGTTTTATCCGTGCAGCTGAAGAGTATGACAAGGAAGAAATTTCAAGGGCCTATTTTGGTGAGCTTGTTGGTAGAAAAATCATCCAGCCTGTACATATCGATGACAGCGGTGAGGTTTTGTCCTGTGTAGTTCACCATATGGTACTCAATTTTGTTACATACAAGTCAATAGAAGAAAATTTTATTGTTGCAATAGACCATTCACAGACAACTGTAAGATTTTCTGACAAGATTCGACGATTATCTATTCACTTCGGTAATGTAGAAGATGCAACTCCACCTACTAATATGAGATTGTCCCAAGTTCGGACAGTTGCCTTTTTTGGGGTCTTGAAGTATATGCCTTCAATTATGGAGTTTCGACTTATTAAAGTTCTAGTTCTAAATTTCTTGGGTGATGAGAATATCATCGGCATTTTTGATCTCACTAAAATTTCAGAACTTGTCCGGCTGAGATATTTGAAGGTTACCTCTAATGTCACCTTAAAACTGCCAACCAAGATACAAGGTCTACAATATTTGGAGACACTGAAAATAGATGGAAAAATAGGTGCAATTCCATCAGACATTATTCATTTGCCAGGCTTGCTGAATCTTAGTCTTCCTGCAAAGACAAACCTGCCCAGTGGAATTGTCCACATGACATCGCTCTGTACACTTGGATATTTTGATCTCAGCTGTAACTCAGAAGAGAATCTGCAGAGCCTTGGCCAGCTGACCAATCTCCGGGATCTTCAACTCACCTATTCTGCTGTACATTCTGACATCTTGAAGAATAATATGCAGTGCCTTGGATCCATTCTAGGGAAACTCGGTAACCTCAAGTCTATAACTCTATCACCTGCAGGCTCTTCTTATGCCAGTAATATGCATATTGACAGCGGTTGTAGAATCTTTGTTGATGGCTGGAGCAGCATGTCCTCTGTACCATCCCTTCTTCAGAGGCTTGAGTTGTTACCAGGTGTTTGCATCTTTTCTGGCCTCCCGAATTGGATTGGGCAGCTTCGAAATCTCTGCATTTTAAAGATTGGGACTAGGGAAGTAACCAGTAATGATGTTGTTGTTCTCAGAGGATTACCAGCACTCGCTGCTTTGTCACTATATGTCCTCACGAAGCCTACAGAAAGGATCGTCTTTGACAATGTAGGGTTTTCGATCCTCAAATACTTCAAGTTCCGATGCATCGTAGCATGGATGAAATTTGAGGTGGGCGCAATGCCTAATCTCCGGAAGCTCAAGCTAGGTTTTGATGTGTACAGAGCAGATCAGTATGATATTATTCCTGTTGGAATCGAACATTTGTCAGTACTTGAAGAGATCTCTGCAAAAATTAGGGTCGCCTGTACCACTGATGATCTTTGTAGAAGATTTGCAGAGTCAGCTGTGACTAACGCCATTAGGATGCATCCAGGACATCCTAGCGTCAAGATACATTGTGTAGATTGGACCTTTTTTTATGGTATAGATGATGACAATGTCGAGACACTCGAGGAAGAACTTAGGACCCTGCAAAAACAACATATCATGAAAGAAAGCTCAAGTGAGACATCTGCAGTTCTACAAATGGACCCTGGGGAAGCAGCACAGAAATCTGCTGACAGAAGGTGCGCATGTGAAGGTCAATGGCTTGGGAGCGGCGGCGACTTCCTTTGGGTCAAAGGAGGAGACGATGCTCCGGTGTGGTTCGGGGGCGAGTGA
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| Protein seq | MEGAMFNLPGRLDGLQLRHGSILPKGAEEEIPLIKQDLEEIISILHGHCSEPKLEDHAMVVRFWMKEARELSYDIEDCIDQYEHAATTTLSRTGPNIRHYKFNRRRGNKIPWVPQKLKQRLWMANKIREFSLRTQEALQRHAMYNNLGGIARTAATTSGDVFSATPWYLIIIDDLWATSTWDVIKCALPDGNSSSRILTTTEIEDLALQSCSYDLKFIFKMKPFGEGDSRKLFFSIVFGSHSRCPPEVSETLYDIVRKCGGLPLAIVTVASLLASQLEKQEQWDYINKSLGYSLMANPTLEGMKQLLKLSYNNLPQHLKACMLYLSMYQGDHIIWKDDLVSQWIAEGFIRAAEEYDKEEISRAYFGELVGRKIIQPVHIDDSGEVLSCVVHHMVLNFVTYKSIEENFIVAIDHSQTTVRFSDKIRRLSIHFGNVEDATPPTNMRLSQVRTVAFFGVLKYMPSIMEFRLIKVLVLNFLGDENIIGIFDLTKISELVRLRYLKVTSNVTLKLPTKIQGLQYLETLKIDGKIGAIPSDIIHLPGLLNLSLPAKTNLPSGIVHMTSLCTLGYFDLSCNSEENLQSLGQLTNLRDLQLTYSAVHSDILKNNMQCLGSILGKLGNLKSITLSPAGSSYASNMHIDSGCRIFVDGWSSMSSVPSLLQRLELLPGVCIFSGLPNWIGQLRNLCILKIGTREVTSNDVVVLRGLPALAALSLYVLTKPTERIVFDNVGFSILKYFKFRCIVAWMKFEVGAMPNLRKLKLGFDVYRADQYDIIPVGIEHLSVLEEISAKIRVACTTDDLCRRFAESAVTNAIRMHPGHPSVKIHCVDWTFFYGIDDDNVETLEEELRTLQKQHIMKESSSETSAVLQMDPGEAAQKSADRRCACEGQWLGSGGDFLWVKGGDDAPVWFGGE
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 11.35386 | 0.322364 | 0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_11g0685400 | SBH | 5.658151 | 4.260761 | 0.572070 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os11g45840 | SBH | 5.631825 | 5.050056 | 1.784015 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os11g0685400 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_11g0024250 | SBH | 0.858141 | 0.000000 | 1.780773 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_11g0024210 | SBH | 0.198599 | 2.936731 | 2.884382 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_11g0023790 | RBH | 9.416762 | 1.133718 | 4.608840 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_11g0023600 | SBH | 0.021435 | 0.193460 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_11g0024060 | SBH | 5.791612 | 0.0 | 11.852215 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_11G0437900 | SBH | 0.023882 | 1.4003845 | 0 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_11g0024450 | SBH | 0.156799 | 0.040792 | 0.934761 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_12G0338900 | SBH | 0.7873095 | 5.0799875 | 3.081101 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_11g0024380 | RBH | 0.0 | 0.000000 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_11g0024310 | SBH | 0.874429 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_11g0023740 | SBH | 2.832259 | 19.498186 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_11g0023630 | RBH | 8.626955 | 0.0 | 4.394338 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_11g0024010 | RBH | 2.767192 | 1.269637 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_11G024020 | RBH | 2.763694 | 0.0 | 1.427531 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_11g0024220 | RBH | 12.054096 | 0.0 | 3.175274 |
