Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsZS97_11G0425800 | OGI:11076450 | 1/16 | Zhenshan 97 | ZS97RS3 | HZAU | Chr11:30274018-30275714 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | ATGGCTCACTGTGACACAGAGAACTCGATCAGCATCGGAAGCCATGGTGAGTGGCTCTTATACCAAAGTTGTCATGACTCGAGACCATGATAGGATAACCACCACCACGAGGATAGTTGGGCGGCGTTGGCTACAAAAGGAGAAGGGATGGGCGGCGTCGGCTACAGAAGGAGAAGGGATGCAGATTTAGACTGGGGAAAGAACATTAGGGAGAGATTAGACTAATTCTGATTTATTCATTGCTTAATCAAAACAATTACAATCCCATCCTTGTATAAATGGTGAGACTTAACCCCTAAGTAACTAATTGATCTAATCTTATCTTCACTCGCCCTAAGTTGGCTCCACGGGCCTTGGCCTCTCGGCCCAATGCTCATGTCATCTTCTTTAACTACATGCATGTTAGAATTTGATGGTCGCTATGTTACAAAAGACGATTTTAATTCAGACCAGCAGGTATGCCTTGATACCAGCATTAATCTACATATCCAAACCTTGATGTGTGAACTTAGAACAGTACGTGCAATTTCTATTTCAGCATGCAGTGAATTGTTTGAAAAAACGAGCGTATGATGTTCTGGATGACATTGCCTTTGATGACAAAATGAAAAACAACTATCCAGTATCTTTGTCTTCGGCTATGAACACAAGCATTACTGATGGTGATGCTTCCATTCCCTTAACAGATATCCATGTTACGTTTCAAGGTAAGGCGTTGGTCTTCTTCTCTTGTCTTTGATCATCAGACCAACGCGTGATGATTTTGTTGTTTGGTACTGCAGCAGTTGGGACTTCTCATCATGCTGAGATTTATCAAGCACCTGAACTGCCTCAAGCATTTCTGAACTATAATAGTGCTTGTGAGATAGAACCAAATGTGGAAGAATTAATTCCTACAGAAGAATACTGCTTATATGACCATCAAGGTTGGTTCTGTATTTTTTTGGGCGGCTTATGCAGGATTTATTTGAAGAATATTTTTGTTTTGATGATGATGGAGATTTGTAAAAAAAATTCAGATGAAGGTTATCGAGCAGGTGCTATGACTCAGATCTTCGGTGGATATTCCCAAGTTGACATCCCTATTGGATGCTATATTGGCCAGGCATCTGAAGTAAGTATTGCTTCTGTTCATTTGACTCAGTCTGTAACATTCTTACTTCTTAGATAATGGATTAAAAGCCAGCCTCTACATCGAAACCAGATGTACATAGCAACCTGTAACATTCTTAATGGAACAGAGATGAAATTATTGTCAATTTGTCATGCTACTAGCTCAACATAACTCCTGAACTCGTCCAATTGCTAGCTTTTTCATGCCAATAAGTTAATTTTCCTGATGCCAATAAGGTTTGCAGCTTGAACATATGGAATACACGCCCATGAATATGTGTCTGTCTTTGATTATCATTATTATTTTTTGAATGAACCGGCACGAGATTGTGCCTATTTCATTGAATAGAGAAGAAAACAATTACAACCCCTAGGGACCATGAGTATTGAGATCACTGCATTTCTGCATCTTTCTCCTATCATGCCCACACTCATTGCATGCTAACGAGTCTTCTAATTTGTAGGGTACTTCTTCTGGTGGCAATGCCTTGATCGGACTGACGAATGTGTCACAGAATGTCAGCGATGACAGCAATGCAGAACTGATTGACAGCGACATGAATCCTTATCGGTACATCATTTAA
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| CDS seq | ATGGCTCACTGTGACACAGAGAACTCGATCAGCATCGGAAGCCATGAATTTGATGGTCGCTATGTTACAAAAGACGATTTTAATTCAGACCAGCAGCATGCAGTGAATTGTTTGAAAAAACGAGCGTATGATGTTCTGGATGACATTGCCTTTGATGACAAAATGAAAAACAACTATCCAGTATCTTTGTCTTCGGCTATGAACACAAGCATTACTGATGGTGATGCTTCCATTCCCTTAACAGATATCCATGTTACGTTTCAAGCAGTTGGGACTTCTCATCATGCTGAGATTTATCAAGCACCTGAACTGCCTCAAGCATTTCTGAACTATAATAGTGCTTGTGAGATAGAACCAAATGTGGAAGAATTAATTCCTACAGAAGAATACTGCTTATATGACCATCAAGATGAAGGTTATCGAGCAGGTGCTATGACTCAGATCTTCGGTGGATATTCCCAAGTTGACATCCCTATTGGATGCTATATTGGCCAGGCATCTGAAGGTACTTCTTCTGGTGGCAATGCCTTGATCGGACTGACGAATGTGTCACAGAATGTCAGCGATGACAGCAATGCAGAACTGATTGACAGCGACATGAATCCTTATCGGTACATCATTTAA
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| Protein seq | MAHCDTENSISIGSHEFDGRYVTKDDFNSDQQHAVNCLKKRAYDVLDDIAFDDKMKNNYPVSLSSAMNTSITDGDASIPLTDIHVTFQAVGTSHHAEIYQAPELPQAFLNYNSACEIEPNVEELIPTEEYCLYDHQDEGYRAGAMTQIFGGYSQVDIPIGCYIGQASEGTSSGGNALIGLTNVSQNVSDDSNAELIDSDMNPYRYII |
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| Function | - | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsZS97_11G0425800 | OsZS97_11T0425800.1 | Chr11 | 30274018 | 30275714 | + | makerRMon | ||
| CDS seq | ATGGCTCACTGTGACACAGAGAACTCGATCAGCATCGGAAGCCATGAATTTGATGGTCGCTATGTTACAAAAGACGATTTTAATTCAGACCAGCAGCATGCAGTGAATTGTTTGAAAAAACGAGCGTATGATGTTCTGGATGACATTGCCTTTGATGACAAAATGAAAAACAACTATCCAGTATCTTTGTCTTCGGCTATGAACACAAGCATTACTGATGGTGATGCTTCCATTCCCTTAACAGATATCCATGTTACGTTTCAAGCAGTTGGGACTTCTCATCATGCTGAGATTTATCAAGCACCTGAACTGCCTCAAGCATTTCTGAACTATAATAGTGCTTGTGAGATAGAACCAAATGTGGAAGAATTAATTCCTACAGAAGAATACTGCTTATATGACCATCAAGATGAAGGTTATCGAGCAGGTGCTATGACTCAGATCTTCGGTGGATATTCCCAAGTTGACATCCCTATTGGATGCTATATTGGCCAGGCATCTGAAGGTACTTCTTCTGGTGGCAATGCCTTGATCGGACTGACGAATGTGTCACAGAATGTCAGCGATGACAGCAATGCAGAACTGATTGACAGCGACATGAATCCTTATCGGTACATCATTTAA
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| Protein seq | MAHCDTENSISIGSHEFDGRYVTKDDFNSDQQHAVNCLKKRAYDVLDDIAFDDKMKNNYPVSLSSAMNTSITDGDASIPLTDIHVTFQAVGTSHHAEIYQAPELPQAFLNYNSACEIEPNVEELIPTEEYCLYDHQDEGYRAGAMTQIFGGYSQVDIPIGCYIGQASEGTSSGGNALIGLTNVSQNVSDDSNAELIDSDMNPYRYII
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.013893 | 0 | 0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_11g0668300 | SBH | 0.0 | 0.0 | 0.266272 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os11g44600 | SBH | 0.0 | 0.0 | 0.070526 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os11g0668300 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_11g0023080 | SBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_11g0023150 | SBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_11g0022790 | SBH | 0.0 | 0.0 | 0.214364 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_11g0022480 | SBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_11g0022750 | SBH | 0.0 | 0.000000 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_11G0405200 | SBH | 0.1262115 | 61.988119 | 0.0106005 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_11g0023630 | SBH | 0.0 | 0.083715 | 0.042093 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_11G0423900 | RBH | 0 | 0.577937 | 0.009919 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_11g0023280 | SBH | 0.043996 | 0.000000 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_11g0023380 | SBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_11g0022970 | SBH | 0.0 | 8.238838 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_11g0022710 | SBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_11g0022600 | SBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_11G022970 | SBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_11g0023400 | SBH | 0.0 | 0.0 | 0.0 |
