Basic Info |
Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
OsZS97_11G0404800 | OGI:11072920 | 15/16 | Zhenshan 97 | ZS97RS3 | HZAU | Chr11:28871637-28873230 | ||||||||
Gene Symbol | - | ||||||||||
DNA seq | GCACCAACCATTATTTTGTTCCGTTGTTTATACTCCACCCCCATTTCAAAAGAATGTATGATTGTGATCAAGATTAGTTATCTCCACTCGCTCCAACCAATTAAATGATCTAAAACAGAGATAGAGTGGTTTTACAATAAGTTTCCGTTAGAATATTGAGAGGATGTCCTTCTCTGAAAAAGAATGAAAATTGATTACATCTTGGGCCTCTACCGTTAGGCGAGACAAAGATATCCCTCTTAAGGCTGAAAAGTATTTCCCAATGGAATTGATGTGATCTGCATCCATGGCCACCATTGCTGTCACTCAGACAGGTACAGCGAAGATCACAATCATACACCTCAACGGCCACAACCTGTCACCATACACACAAGAAAGAAAAAAGTCTAATCAGGACCAAAAATTATGTCCTACAGTTGTACAGATGCAATCGCAGCAGCTACTACAGTGTCCGTTGCTATATAATCAGCAGCATCAATGCAGTCCTCTCCTCACCATCAATCCATTCCTCCATCTAATCCCGATTGAAATGGCGCCCAAGGTGTTCGTCCCGCTCTGCGTCGTCGTCCTCGCCGCGGCGCTCGCCGCGGGGCCGCCGGTGGCGGACGCGGCGTCGGCGCACCTCCACTTCTACATGCACGACGTGCTGGGCGCGTCGGCGGTGCAGGTGGTGCGGGGCCCGCGCGGCATGTTCGGGAACACGGTGGTGATGGACGACGTGCTGACGGAGGGACCCGCGGCGACGTCGTCGGTGCTGGGGCGCGCCCAGGGGCAGTACATCGTGGCGTCGACGGGGAGCATGGACCTGATGGTCACCATGAACGTCGTTCTCAGCTCCGGCCCGTTCGCCGGCAGCTCGGTGACCGTCGTCGGGCGCGACGACACCGGCGCGGCGGTGCGGGAGCTGACGGTGGTGGGGGGCACGGGGCAGTTCAGGATGGCGAGAGGGTACGTGCTGTGGAGGACCATCCGCCCTGACCTGCTCGAGCTCGACGTCTACGTTAACCCGTAGAAAAGATAAGAGAGACGATGACGATGAGGATGATGATCTGTCGAAAACGGACACGTCATTCGCCCAGTCAGCATCTGTGTTCGTGTGTATGTGTGTGACGTGGCGTGTTCTTGCACAGGTGTCGTACCGGTAAAGGCTTATCCTTGTGGTGTGTGTGTGTCCGGTGAAAAAATAAGCTTGACATGGGCGAACCTGATGGGTATAATAATAATTCTTATATACTATATATTTAATTTACTGAACATTATTGTCATACGGAACATTGAAATGTAGTATTTTTGTTTGTGTTTCCTTTTAAACTTATTACTTGAAGCTCGAGGAATATGAAATTGAAAATTTGACCTCTAAACTTGGAATGACTAAAAATTGAAGGTCCATGAACGACACTATGAAATTAAAAAAAAAACTCTCAAATTCGCAGTACGAGCAAAAACTCATGAAACTCAAATACACATTAATCATGATTTTTTTTCTTTTTATAAAGTGTTTCTCCTTGCATGACTAAAATACCAAAGTTTCTCAGCTGGCAGGCCAGAATCTAGAATTAAAATTATCGGGTGTCCTGTGTATGGCTGTATGTAC
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CDS seq | ATGGCCACCATTGCTGTCACTCAGACAGGTACAGCGAAGATCACAATCATACACCTCAACGGCCACAACCTGTCACCATACACACAAGAAAGAAAAAAGTCTAATCAGGACCAAAAATTATGTCCTACAGTTGTACAGATGCAATCGCAGCAGCTACTACAGTGTCCGTTGCTATATAATCAGCAGCATCAATGCAGTCCTCTCCTCACCATCAATCCATTCCTCCATCTAATCCCGATTGAAATGGCGCCCAAGGTGTTCGTCCCGCTCTGCGTCGTCGTCCTCGCCGCGGCGCTCGCCGCGGGGCCGCCGGTGGCGGACGCGGCGTCGGCGCACCTCCACTTCTACATGCACGACGTGCTGGGCGCGTCGGCGGTGCAGGTGGTGCGGGGCCCGCGCGGCATGTTCGGGAACACGGTGGTGATGGACGACGTGCTGACGGAGGGACCCGCGGCGACGTCGTCGGTGCTGGGGCGCGCCCAGGGGCAGTACATCGTGGCGTCGACGGGGAGCATGGACCTGATGGTCACCATGAACGTCGTTCTCAGCTCCGGCCCGTTCGCCGGCAGCTCGGTGACCGTCGTCGGGCGCGACGACACCGGCGCGGCGGTGCGGGAGCTGACGGTGGTGGGGGGCACGGGGCAGTTCAGGATGGCGAGAGGGTACGTGCTGTGGAGGACCATCCGCCCTGACCTGCTCGAGCTCGACGTCTACGTTAACCCGTAG
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Protein seq | MATIAVTQTGTAKITIIHLNGHNLSPYTQERKKSNQDQKLCPTVVQMQSQQLLQCPLLYNQQHQCSPLLTINPFLHLIPIEMAPKVFVPLCVVVLAAALAAGPPVADAASAHLHFYMHDVLGASAVQVVRGPRGMFGNTVVMDDVLTEGPAATSSVLGRAQGQYIVASTGSMDLMVTMNVVLSSGPFAGSSVTVVGRDDTGAAVRELTVVGGTGQFRMARGYVLWRTIRPDLLELDVYVNP |
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Function | Dirigent protein 1 [UniProtKB/Swiss-Prot:Q9FIG6] |
Transcripts
Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
OsZS97_11G0404800 | OsZS97_11T0404800.1 | Chr11 | 28871637 | 28873230 | + | makerRMon | ||
CDS seq | ATGGCCACCATTGCTGTCACTCAGACAGGTACAGCGAAGATCACAATCATACACCTCAACGGCCACAACCTGTCACCATACACACAAGAAAGAAAAAAGTCTAATCAGGACCAAAAATTATGTCCTACAGTTGTACAGATGCAATCGCAGCAGCTACTACAGTGTCCGTTGCTATATAATCAGCAGCATCAATGCAGTCCTCTCCTCACCATCAATCCATTCCTCCATCTAATCCCGATTGAAATGGCGCCCAAGGTGTTCGTCCCGCTCTGCGTCGTCGTCCTCGCCGCGGCGCTCGCCGCGGGGCCGCCGGTGGCGGACGCGGCGTCGGCGCACCTCCACTTCTACATGCACGACGTGCTGGGCGCGTCGGCGGTGCAGGTGGTGCGGGGCCCGCGCGGCATGTTCGGGAACACGGTGGTGATGGACGACGTGCTGACGGAGGGACCCGCGGCGACGTCGTCGGTGCTGGGGCGCGCCCAGGGGCAGTACATCGTGGCGTCGACGGGGAGCATGGACCTGATGGTCACCATGAACGTCGTTCTCAGCTCCGGCCCGTTCGCCGGCAGCTCGGTGACCGTCGTCGGGCGCGACGACACCGGCGCGGCGGTGCGGGAGCTGACGGTGGTGGGGGGCACGGGGCAGTTCAGGATGGCGAGAGGGTACGTGCTGTGGAGGACCATCCGCCCTGACCTGCTCGAGCTCGACGTCTACGTTAACCCGTAG
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Protein seq | MATIAVTQTGTAKITIIHLNGHNLSPYTQERKKSNQDQKLCPTVVQMQSQQLLQCPLLYNQQHQCSPLLTINPFLHLIPIEMAPKVFVPLCVVVLAAALAAGPPVADAASAHLHFYMHDVLGASAVQVVRGPRGMFGNTVVMDDVLTEGPAATSSVLGRAQGQYIVASTGSMDLMVTMNVVLSSGPFAGSSVTVVGRDDTGAAVRELTVVGGTGQFRMARGYVLWRTIRPDLLELDVYVNP
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Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
Leaf | Root | Panicle | |
FPKM | 159.153492 | 0.04462 | 0.046321 |
Homologues
Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
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Leaf | Root | Panicle | |||
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_11g0644700 | RBH | 2.199417 | 0.817153 | 1.947510 |
Nipponbare | IRGSP 1.0 | MSU | LOC_Os11g42500 | RBH | 0.570613 | 0.368325 | 0.335972 |
Nipponbare | IRGSP 1.0 | RAP-db | Os11g0644700 | RBH | None | None | None |
Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_11g0021870 | RBH | 0.482113 | 25.010864 | 33.306431 |
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_11g0021840 | RBH | 0.110284 | 0.0 | 1.236594 |
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_11g0021680 | RBH | 0.0 | 20.137657 | 9.674026 |
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_11g0021180 | RBH | 0.062392 | 0.152086 | None |
PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_11g0021690 | RBH | 0.0 | 2.828086 | 21.254097 |
Minghui 63 | MH63RS3 | HZAU | OsMH63_11G0385400 | SBH | 374.056091 | 0.1341265 | 0.132906 |
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_11g0022260 | RBH | 0.0 | 1.257568 | 0.968424 |
Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_11G0405300 | RBH | 273.0937345 | 0.0344955 | 0.7231875 |
LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_11g0022040 | RBH | 0.000000 | 0.000000 | None |
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_11g0022140 | RBH | 0.0 | 0.0 | None |
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_11g0021790 | RBH | 1.977004 | 0.0 | None |
LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_11g0021380 | RBH | 0.474599 | 0.0 | 0.792511 |
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_11g0021540 | RBH | 0.0 | 5.272443 | None |
N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_11G021600 | RBH | 0.0 | 0.766089 | 6.108666 |
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_11g0022090 | RBH | 0.0 | 0.0 | 26.953764 |