Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsZS97_11G0367700 | OGI:11067180 | 2/16 | Zhenshan 97 | ZS97RS3 | HZAU | Chr11:26358697-26365277 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | CCGTAAGTCTCGTCGTGAGATGTTTCTGGATGGAGCTCGTCTCCGATCCACGTGTGTTGTCTGCAGGGTTATCGCCTGCTTTGAGGATTCGTCGTCCGGCTTCCAATCAGATTGTTTGAGGGGTTTTGATCTGAGATCGGATTCATATTCTTATCATCAATGGTGTGTCCGGCCTGGTTGCAAGGTTCAGTCCTTTTCCCAGAATTTCTTAGTTCCCAATCGTAACATACCAGGAGATCTTTGCCTTTGGATATGGAGATGGATTGTGAAGAAGGAAACGTCACGATCTGGTCCAGGTGCCGTATTCGTTCTGGATTCGTTCTTGGTCTCCGGCCCTTATATAAACAACCCTGGGTCAGATCTATCAAGCACAACCAACAATTGCTGCTTCTGCATCCAATCTGACGAATTAGGGCTCCGGTTTCTTTGTCGTCTCTTTCGGGTCATGGCGTCTTCTGGCGGTGGGGGTGATAAAGGGATCGTCACTGGGATGGTCACCCACCCGAAGCCCCTGGTCGACGCGATGCTCTCCCGTCAAGAGACGTCTACTACGGCCAAGGAGATCATCTTGGCCCCAAATAAGCAGGCTTTGGAGTCAGCGAGTCAGAGTAAAGATAAGATGATCCAGGCTAATCCCAAGACCTTGCCAGCGACGGGGGCTAGCGACACCTACTCAACTGGGCCGGGTGCATACACAGAAGGAGATGTGGAGGAGGAGGATGATGAAGCGGTGGAGGTACTGCTAGAAGATGATGAAGTACAACTAGCTGGGCAGTGGACAGTTTTGTCGAGATTCTACTCGCTTCGATCACCCAATCAAGCGGCTCTATTTGATGACATGAAGCGTGCATGGAGATTGCGAGCTAACATGAAGGTCAAGTCCCTGAGAGATAACATGTTTATCATCACCTTCAGCTCGGAAGGGGATTACAACTTTGTGCTCCAGGGCGGTCCATGGCTTCACCGTGGAGACGCTCTGCTTGTTGCAAAATTCGATGGCCTGACGAGCCCGTCCATGGTTCCCCTTGAGTTTATGCCAATCTGGGTCAGGATTTATGACCTCCCCTTGGTGCTTATGACAAAGAGGAGGGGAGAACTGTATGGCATCAAACTTGGACATGTGAGGGAAGTAGATGTTGGTGAAGATGGCAGAAACAAGCATGACTTCTTCCGGATCCTGGTTGATTTATCAGTCAAGAAGCCGCTGAAAACCTCGCTTGCTATAAAAATTAATGTGCAGGGAAGTGAAGCTGTCCGACGTTTCGAGCTACGATATGAGAGGGTGCCCTTTTTCTACTTTATTTGTGGTTACATCGGGTACTCTGATAAAGACTGTGACAAAAGAATTGCCAATATTGATCAACCTTTTCGTTACTCAGCTAAGCTACGTTGTTCTCCGCTGAAGCCTTTTGAGAGAAGAATGAGCACAATCCGTGGCCAACAAAAGTCAGGAGTGGCACGCAATCTGGCCTTCCGTGGAGCAGGGAGTGCAAGCTCGTCATCCTCCAAACAGGGGAAAGGTAAAAGCAGGGAGGAGATTATTCCTGACAGGGTCGATGCTCGGGATGGCTTTGAGGGAAGAGAAGATGTGGGGGACGGGGTGGTGGATGAACTGCTAGCTAGTCAGACTAGCAATCTGAACATGTCAGGTGAGAATATGGTGCAGAAAGGAGAACCGGTGGGTATGGAGGAGGAACAACGCCATCAGCTGTCAACATCTAACCTTGTTTCTGATACTGATATGATTCCAGCAATACAGAACCTGCAGCAACCGGCATCCTTTGGAGGAGAGTCTTCCGAGGACATCAGTGATACCAACCGGAAAAGAGTGCAACCACAGAGCAGGAGCAAGATATCCGACAGAGTTCAACAGGCCTTAGTGTTGTATGGTCAAGGATCTGGTAGAGAACAGGCTAAGCAGGTGGACCCAAAGGAGCCAGCGAGAGCTCTCAAACGGTTTCGGAAGACGGAGGTGGAAAGTATGGAAGTTTTGGAAGCAACCAGTCCTGGGGCTACTGGTAAACTGACGGGACCCGCTCTCAGGGCCCGTCAGGAGCAATGAGTTGCCTATCATGGAACTTTCGTGGTTTGGGGAACGCTGCGACAGTTCGCGATCTGTGTGGCCTAGTTAAAGAGGCCGATTCCCAAATTGTTTTCCTAAGTGAGACTAGACAGAAGGCGGATAGAATCAGGCGTTTACGGAATAGGTTGGGTCTTAGAGGTTTTGCTGGAGTTGATAGTGATGGAATGAGTGGAGGGCTCGCTTTGTACTGGCATGAGTCTGTTAATGTGGAAATAAAAGCTTTGTGTGAGAGATATATTGATGCTTATGTTCGCTTGTCGCCGGATGGCCCTCTGTGGCATGCCACCTTTGTGTATGGTGAACCTAGAGTTGAGAATAGGCACAATATGTGGTCGATGCTCCGGTCTGTGAGGAATTCATCCAATTTACCTTGGCTTGTTATTGGTGATTTTAATGAAGCTCTTTGGCAGTTTGAGCATTTTTCATCTCACCCTAGGGGAGAGCCCCAAATGTGAGCTTTCCGGGATCTTCTTCAGTCGTGTGCACTTTTTGATTTGGGATTCAGGGGCACACCCTTTACTTATGATAATAAGCGCCAGGGAAGAAACAATGTTAGAGTGAGACTTGATCGTGCCATTGCTGACAATGCATGGCGTGATACCTTCCCTAATGCGACTCTTGCACACCTGGCCTCCCCCCGTTCAGATCACTGTCCCATATCCTTGCAACTGTCTCAGGAGATGAAACAGCCAGCCAGGAAGAAAATCTTGCATTATGAAATATGTTGGGAACGTGAGCCGTCTTTGCCAGAAGTTGTGCAGGAATCTTGGGTGGAAGCAGGGACTAAATCTGAACTGGGTGATATTAGTGCTGCTCTACGTAAGGTCATGGCATCTCTGCATTCCTGGAGTAAGGTAAAATTCAAGAATATTGGCCGTGAATTACAGAAAGCTAGGAAAAAGCTTGCTGAGCTGCTGGAAACATATGCAGATAGTGCTGCTGTTCGCCAAGCCTCGGATCACATGAACGAACTACTTTATCGTGAAGAGATGTTGTGGTTACAGTGCTCACGGATTAACTGGCTAAAGGAGGACGACCGTAACACTCGCTTCTTTCATAGTAAGGCTGTTTGGAGGGCAAAGAAGAATCGGATTCAGTCTCTTAAAGACAGTGCTGGCACTGTACACCGTTCGGCAACAGCAATGGAGCAGCTGGCTACTGAATATTTTCAGGAAGTGTATTCTGCCGACCCTAGTCTGGATCACAGTATAGTATCAAGTCTCTTCCAGTCGAAAGTTTCAGCACAGATGAATGAGGCTTTATGCAGCAATTTAACAGAAGAGGAGATCTCTACCACCATCTTCCAGATCGGCCCGCTGAAAGCGCCGGGCCCCGATGGATTTCCGGCCAGGTTCTATCAACGAAATTGGGGCACAATTAAAAGTGAGGTAGTCAAGGCAGTTCATAATTTCTTCATCATAGGAGTGATGCCGGAGGGGATAAATGACACAACAATTGTTTTGATTCCGAAGATTAAGCAGCCCACCCAACTGAAGGACTACCGGCTGATCAGCCTCTGTAATGTCATTTATAAAGTGGTGAGCAAATGTCTGGTTAACAGGCTGAGACCGTTCCTAGATGAACTGGTTTCGCCTAATCAAAGTGCTTTTGTCCCTGAGCGTCTTATAACTGACAATGCTCTAGTAGCTTTTGAGTGTTTCCATTTCATACAAAAGAACAAGAATCCAAACAAGGCTGCATGTGCTTACAAGTTGGACCTGTCCAAGGCTTACAACAGGGTAGATTGGGGGTTTTTGGAGCAAGCAATGCACAAGATGGGTTTCGCTCACCGGTGGGTTAGTTGGATAATGTTGTGTGTAACCACAGTGAGATACTCTGTGAAATTCAATGGGACCTTGTTAAGTGCATTCGCTCCAACAAGAGGTTTACGCCAGGGCGATCCTCTCTCTCCATTTCTTTTCCTGTTTGTGGCTGATGGATTGTCACTCCTTCTAGAGGAAAAAGTTAGGCAAGGAGCTATTTTGCCTCTTCACGTTTGCCGACGGGCACCAGGGATCTCTCACTTATTGTTCGCTGATGATACCCTACTGTTTTTTGAAGCAGTGAAAGAGCAGGCTGTGGCAATCAAGCAAGTGCTGAATGACTTTGCCACAAGCACTGGCCAATTGATTAACCCGTCGAATGCTCAATCATGTTTGGTGCGGCTTCCCCTGCAGCAATCCAACAGGATATCAGATCGATTTTGCAAGTTGGTGATAATGGTTTCGATGACAGATACCTGGGGTTTCCGACACCGGAGGGTAGAATGAAGAAAGGGCATTTCCAGAGTTTACAAGAGAAGGTTTGGAAACGAATTCTGCTGTGGGGCGAAAACCATCTGTCATCGGGTGGAAAGGAAGTGCTTATAAAAGCTGTTCTTCAAACCATACCGGTTTACGTCATGTGTATTTTTAAAATCCCTGATGCAGTGTGCGATGAGCTGACAAAGGCCATTAGGAACTTTTGGTGGGGAGCAGTTGGGGGCAAAAGAAAGACGCATTGGAAATCTTGGAATTCCATAACCAAGTCGAAGCAAAGAGGGGGTCTGGGATTTCGTGATACTAGGCTCTTCAACCAAGCGCTTTTGGCCCGATAAGCTTGGAGACTGTTAGAGAATCCAGATAGTCTCTGTGCACACCTTCTAAAGGCAAAGTACTATCCCAACGGTTCCATCGTTGACACCTGTTTCAGCGGGAATGCTTCACCTGGGTGGAGAGGAATTGAACATGGGTTGGAGCTACTCAAGAAAGGAATTATTTGGCGGGTGGGTAACAGACAGTCCATAAGAGTATGGCGAGATCCCTGGTTACCGAGAGATTATTCCAGACGGCCCATCACCCGCAAAGGTAATTGTCGTATCAAGTGGGTGTCGGATTTGCTACAGGATGATGGAACTTGGAGGGTTGATAAAGTGCAGGAACACTTTTGGCCGATAGATGTAGAAATGATCCTGAAGATTCGCACCTCAGCTTCACTTGAATCCAATTTTTTGGCTTGGCATCCTGATAGATTGGGAAAATTCTCGGTCAGGAGTGTGTACCACTTGGTCGTTTCGCTTGCAGAGACCGGTGATTGCTCCAGTTCTACAGAGGTGCTAGTAAATAAATCTTGGAAGCGTATCTGGGCGTGCAATGTCCCACAAAAAGTCAGAATCTTCGCTTGGAAGGCTATATCTAATAGTCTCCCCACAATGAAGAACAAAAAGAAGAGGAATCTGGAGTTGTTGAGCACTTGCTGCATATGTGGAGCCGAGGAAGAGGATGTTGCCCATGCGCTTTGTCATTGTCAGCAAGCGAGGAACCTGTGGTCGGCTATGTATTCTGCGAGAGCCATCTCTCATGACGTGAATAGTGCTTGGTCCGGGACGGATTGGATCCTGAACCTTTTGGAGGTGCTCCCAAAGGAAGAGGATGCCATGTTTCTCATGCTAATGTGGCGCATTTGGCATAACAGAAATGAGATCACCCATGGTAAATCAATTGCGCCAGTGGCTGTCTCTCAGAGATTCATCTTTAGTTATGTTAGCTCGCTAACTACTATTAAGCAGTACCCTCAAGCTGACATAATTAAAGGTAAACAGGTGGCACACCCGGACCGCATTAGGCTTCCCAGCCAAGCTCCCCCCGCAGTCAGTTCGCCTAGGCGCTGGGAGAAACCGAGCACAAGGTGGATGAAATTGAACGTTGATGGATCCTTTCAGGCTTCGGATGGTAAAGGTGGAATTGGGGCTGTTTTTAGAGACAGCTCTGGAAATGTTATTTTTGCTGCCTGTGGGTCTATGCTGGTTTGTGGTAGTGCTATGGAAGCAGATTACTCGCGTGCAGGGAGGGTATTGCAATGGCGCTTCAATGGACGTTCCTGCCTTTCATTGTGGAAACTGATTGCTTAGAGGTGTTTAATCTAATTCAATCAAAAGAGAAGGTGCTGTCCGAGTTAGCTTTTGTTGTCAAGGAGGTTCAGGTCCTCATGACAGGCAACAGGGAGATTAAAGTCAGGAAGGAGTCCCGTGATCAGAATAGTGTTAGTAATTTCGGGCCCCTTTGATTTGTAGGAAAAATGTAGGAATTTTGGAGGATTTTAATCCTATGGAAAAAAGTCCTATGAAGGCCTTTGAGACAAAGGATTGAATCCTATCCAATCCTTTAAAATTCCTATGGAATGGGTAATCCTATGCACATTTTGGAGGAAAGTTAGCAAGAGGTCTAACCTCTTGGAACATTTTCTCTGAGTCTATTTCTCTCATCTGATTCCTGCGTTTTTCCTGTGGTCCAATCAAATGGCCATTCCTGTGTTTTTCCTGTGTTTTGCAATCCTCTGTTTTACAATTGTATTCCTGTCAGAATCCTGTGTTTTTCCTATTCCTCTGTTTTTTCATTCCTACGATTCAAAGGGGCCCTTCCTTGCTAACAAGGGAAGATGTGAGGCCTTAACTTCTTTCTGGCCTGATAACACTTGTAATCTCATTTCACATCTCATCGATGTGGACTCAATTGAGTAA
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| CDS seq | ATGAGTTGCCTATCATGGAACTTTCGTGGTTTGGGGAACGCTGCGACAGTTCGCGATCTGTGTGGCCTAGTTAAAGAGGCCGATTCCCAAATTGTTTTCCTAAGTGAGACTAGACAGAAGGCGGATAGAATCAGGCGTTTACGGAATAGGTTGGGTCTTAGAGGTTTTGCTGGAGTTGATAGTGATGGAATGAGTGGAGGGCTCGCTTTGTACTGGCATGAGTCTGTTAATGTGGAAATAAAAGCTTTGTGTGAGAGATATATTGATGCTTATGTTCGCTTGTCGCCGGATGGCCCTCTGTGGCATGCCACCTTTGTGTATGGTGAACCTAGAGTTGAGAATAGGCACAATATGTGGTCGATGCTCCGGTCTGTGAGGAATTCATCCAATTTACCTTGGCTTGTTATTGGTGATTTTAATGAAGCTCTTTGGCAGTTTGAGCATTTTTCATCTCACCCTAGGGGAGAGCCCCAAATGGGCACACCCTTTACTTATGATAATAAGCGCCAGGGAAGAAACAATGTTAGAGTGAGACTTGATCGTGCCATTGCTGACAATGCATGGCGTGATACCTTCCCTAATGCGACTCTTGCACACCTGGCCTCCCCCCGTTCAGATCACTGTCCCATATCCTTGCAACTGTCTCAGGAGATGAAACAGCCAGCCAGGAAGAAAATCTTGCATTATGAAATATGTTGGGAACGTGAGCCGTCTTTGCCAGAAGTTGTGCAGGAATCTTGGGTGGAAGCAGGGACTAAATCTGAACTGGGTGATATTAGTGCTGCTCTACGTAAGGTCATGGCATCTCTGCATTCCTGGAGTAAGGTAAAATTCAAGAATATTGGCCGTGAATTACAGAAAGCTAGGAAAAAGCTTGCTGAGCTGCTGGAAACATATGCAGATAGTGCTGCTGTTCGCCAAGCCTCGGATCACATGAACGAACTACTTTATCGTGAAGAGATGTTGTGGTTACAGTGCTCACGGATTAACTGGCTAAAGGAGGACGACCGTAACACTCGCTTCTTTCATAGTAAGGCTGTTTGGAGGGCAAAGAAGAATCGGATTCAGTCTCTTAAAGACAGTGCTGGCACTGTACACCGTTCGGCAACAGCAATGGAGCAGCTGGCTACTGAATATTTTCAGGAAGTGTATTCTGCCGACCCTAGTCTGGATCACATTTCAGCACAGATGAATGAGGCTTTATGCAGCAATTTAACAGAAGAGGAGATCTCTACCACCATCTTCCAGATCGGCCCGCTGAAAGCGCCGGGCCCCGATGGATTTCCGGCCAGGTTCTATCAACGAAATTGGGGCACAATTAAAAGTGAGGTAGTCAAGGCAGTTCATAATTTCTTCATCATAGGAGTGATGCCGGAGGGGATAAATGACACAACAATTGTTTTGATTCCGAAGATTAAGCAGCCCACCCAACTGAAGGACTACCGGCTGATCAGCCTCTGTAATGTCATTTATAAAGTGGTGAGCAAATGTCTGGTTAACAGGCTGAGACCGTTCCTAGATGAACTGGTTTCGCCTAATCAAAGTGCTTTTGTCCCTGAGCGTCTTATAACTGACAATGCTCTAGTAGCTTTTGAGTGTTTCCATTTCATACAAAAGAACAAGAATCCAAACAAGGCTGCATGTGCTTACAAGTTGGACCTGTCCAAGGCTTACAACAGGGTAGATTGGGGGTTTTTGGAGCAAGCAATGCACAAGATGGGTTTCGCTCACCGGTGGGTTAGTTGGATAATGTTGTGTGTAACCACAGTGAGATACTCTGTGAAATTCAATGGGACCTTGTTAAGTGCATTCGCTCCAACAAGAGGTTTACGCCAGGGCGATCCTCTCTCTCCATTTCTTTTCCTGTTTGTGGCTGATGGATTGTCACTCCTTCTAGAGGAAAAAGTTAGGCAAGGAGCTATTTTGCCTCTTCACGTTTGCCGACGGGCACCAGGGATCTCTCACTTATTGTTCGCTGATGATACCCTACTGTTTTTTGAAGCAGTGAAAGAGCAGGCTGTGGCAATCAAGCAAGTGCTGAATGACTTTGCCACAAGCACTGGCCAATTGATTAACCCGTCGAATGATATCAGATCGATTTTGCAAGTTGGTGATAATGGTTTCGATGACAGATACCTGGGGTTTCCGACACCGGAGGGTAGAATGAAGAAAGGGCATTTCCAGAGTTTACAAGAGAAGGCAAAGTACTATCCCAACGGTTCCATCGTTGACACCTGTTTCAGCGGGAATGCTTCACCTGGGTGGAGAGGAATTGAACATGGGTTGGAGCTACTCAAGAAAGGAATTATTTGGCGGGTGGGTAACAGACAGTCCATAAGAGTATGGCGAGATCCCTGGTTACCGAGAGATTATTCCAGACGGCCCATCACCCGCAAAGGTAATTGTCGTATCAAGTGGGTGTCGGATTTGCTACAGGATGATGGAACTTGGAGGGTTGATAAAGTGCAGGAACACTTTTGGCCGATAGATGTAGAAATGATCCTGAAGATTCGCACCTCAGCTTCACTTGAATCCAATTTTTTGGCTTGGCATCCTGATAGATTGGGAAAATTCTCGGTCAGGAGTGTGTACCACTTGGTCGTTTCGCTTGCAGAGACCGGTGATTGCTCCAGTTCTACAGAGGTGCTAGTAAATAAATCTTGGAAGCGTATCTGGGCGTGCAATGTCCCACAAAAAGTCAGAATCTTCGCTTGGAAGGCTATATCTAATAGTCTCCCCACAATGAAGAACAAAAAGAAGAGGAATCTGGAGTTGTTGAGCACTTGCTGCATATGTGGAGCCGAGGAAGAGGATGTTGCCCATGCGCTTTGTCATTGTCAGCAAGCGAGGAACCTGTGGTCGGCTATGTATTCTGCGAGAGCCATCTCTCATGACGTGAATAGTGCTTGGTCCGGGACGGATTGGATCCTGAACCTTTTGGAGGTGCTCCCAAAGGAAGAGGATGCCATGTTTCTCATGCTAATGTGGCGCATTTGGCATAACAGAAATGAGATCACCCATGGTAAATCAATTGCGCCAGTGGCTGTCTCTCAGAGATTCATCTTTAGTTATGTTAGCTCGCTAACTACTATTAAGCAGTACCCTCAAGCTGACATAATTAAAGGTAAACAGGTGGCACACCCGGACCGCATTAGGCTTCCCAGCCAAGCTCCCCCCGCAGTCAGTTCGCCTAGGCGCTGGGAGAAACCGAGCACAAGGTGGATGAAATTGAACGTTGATGGATCCTTTCAGGCTTCGGATGGTAAAGGTGGAATTGGGGCTGTTTTTAGAGACAGCTCTGGAAATGTTATTTTTGCTGCCTGTGGGGAGGGTATTGCAATGGCGCTTCAATGGACGTTCCTGCCTTTCATTGTGGAAACTGATTGCTTAGAGGTGTTTAATCTAATTCAATCAAAAGAGAAGGTGCTGTCCGAGTTAGCTTTTGTTGTCAAGGAGGTTCAGGTCCTCATGACAGGCAACAGGGAGATTAAAGTCAGGAAGGAGTCCCGTGATCAGAATAGTGGGCCCTTCCTTGCTAACAAGGGAAGATGTGAGGCCTTAACTTCTTTCTGGCCTGATAACACTTGTAATCTCATTTCACATCTCATCGATGTGGACTCAATTGAGTAA
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| Protein seq | MSCLSWNFRGLGNAATVRDLCGLVKEADSQIVFLSETRQKADRIRRLRNRLGLRGFAGVDSDGMSGGLALYWHESVNVEIKALCERYIDAYVRLSPDGPLWHATFVYGEPRVENRHNMWSMLRSVRNSSNLPWLVIGDFNEALWQFEHFSSHPRGEPQMGTPFTYDNKRQGRNNVRVRLDRAIADNAWRDTFPNATLAHLASPRSDHCPISLQLSQEMKQPARKKILHYEICWEREPSLPEVVQESWVEAGTKSELGDISAALRKVMASLHSWSKVKFKNIGRELQKARKKLAELLETYADSAAVRQASDHMNELLYREEMLWLQCSRINWLKEDDRNTRFFHSKAVWRAKKNRIQSLKDSAGTVHRSATAMEQLATEYFQEVYSADPSLDHISAQMNEALCSNLTEEEISTTIFQIGPLKAPGPDGFPARFYQRNWGTIKSEVVKAVHNFFIIGVMPEGINDTTIVLIPKIKQPTQLKDYRLISLCNVIYKVVSKCLVNRLRPFLDELVSPNQSAFVPERLITDNALVAFECFHFIQKNKNPNKAACAYKLDLSKAYNRVDWGFLEQAMHKMGFAHRWVSWIMLCVTTVRYSVKFNGTLLSAFAPTRGLRQGDPLSPFLFLFVADGLSLLLEEKVRQGAILPLHVCRRAPGISHLLFADDTLLFFEAVKEQAVAIKQVLNDFATSTGQLINPSNDIRSILQVGDNGFDDRYLGFPTPEGRMKKGHFQSLQEKAKYYPNGSIVDTCFSGNASPGWRGIEHGLELLKKGIIWRVGNRQSIRVWRDPWLPRDYSRRPITRKGNCRIKWVSDLLQDDGTWRVDKVQEHFWPIDVEMILKIRTSASLESNFLAWHPDRLGKFSVRSVYHLVVSLAETGDCSSSTEVLVNKSWKRIWACNVPQKVRIFAWKAISNSLPTMKNKKKRNLELLSTCCICGAEEEDVAHALCHCQQARNLWSAMYSARAISHDVNSAWSGTDWILNLLEVLPKEEDAMFLMLMWRIWHNRNEITHGKSIAPVAVSQRFIFSYVSSLTTIKQYPQADIIKGKQVAHPDRIRLPSQAPPAVSSPRRWEKPSTRWMKLNVDGSFQASDGKGGIGAVFRDSSGNVIFAACGEGIAMALQWTFLPFIVETDCLEVFNLIQSKEKVLSELAFVVKEVQVLMTGNREIKVRKESRDQNSGPFLANKGRCEALTSFWPDNTCNLISHLIDVDSIE |
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| Function | LINE-1 reverse transcriptase homolog [UniProtKB/Swiss-Prot:P08548] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsZS97_11G0367700 | OsZS97_11T0367700.1 | Chr11 | 26358697 | 26365277 | + | makerRMon | ||
| CDS seq | ATGAGTTGCCTATCATGGAACTTTCGTGGTTTGGGGAACGCTGCGACAGTTCGCGATCTGTGTGGCCTAGTTAAAGAGGCCGATTCCCAAATTGTTTTCCTAAGTGAGACTAGACAGAAGGCGGATAGAATCAGGCGTTTACGGAATAGGTTGGGTCTTAGAGGTTTTGCTGGAGTTGATAGTGATGGAATGAGTGGAGGGCTCGCTTTGTACTGGCATGAGTCTGTTAATGTGGAAATAAAAGCTTTGTGTGAGAGATATATTGATGCTTATGTTCGCTTGTCGCCGGATGGCCCTCTGTGGCATGCCACCTTTGTGTATGGTGAACCTAGAGTTGAGAATAGGCACAATATGTGGTCGATGCTCCGGTCTGTGAGGAATTCATCCAATTTACCTTGGCTTGTTATTGGTGATTTTAATGAAGCTCTTTGGCAGTTTGAGCATTTTTCATCTCACCCTAGGGGAGAGCCCCAAATGGGCACACCCTTTACTTATGATAATAAGCGCCAGGGAAGAAACAATGTTAGAGTGAGACTTGATCGTGCCATTGCTGACAATGCATGGCGTGATACCTTCCCTAATGCGACTCTTGCACACCTGGCCTCCCCCCGTTCAGATCACTGTCCCATATCCTTGCAACTGTCTCAGGAGATGAAACAGCCAGCCAGGAAGAAAATCTTGCATTATGAAATATGTTGGGAACGTGAGCCGTCTTTGCCAGAAGTTGTGCAGGAATCTTGGGTGGAAGCAGGGACTAAATCTGAACTGGGTGATATTAGTGCTGCTCTACGTAAGGTCATGGCATCTCTGCATTCCTGGAGTAAGGTAAAATTCAAGAATATTGGCCGTGAATTACAGAAAGCTAGGAAAAAGCTTGCTGAGCTGCTGGAAACATATGCAGATAGTGCTGCTGTTCGCCAAGCCTCGGATCACATGAACGAACTACTTTATCGTGAAGAGATGTTGTGGTTACAGTGCTCACGGATTAACTGGCTAAAGGAGGACGACCGTAACACTCGCTTCTTTCATAGTAAGGCTGTTTGGAGGGCAAAGAAGAATCGGATTCAGTCTCTTAAAGACAGTGCTGGCACTGTACACCGTTCGGCAACAGCAATGGAGCAGCTGGCTACTGAATATTTTCAGGAAGTGTATTCTGCCGACCCTAGTCTGGATCACATTTCAGCACAGATGAATGAGGCTTTATGCAGCAATTTAACAGAAGAGGAGATCTCTACCACCATCTTCCAGATCGGCCCGCTGAAAGCGCCGGGCCCCGATGGATTTCCGGCCAGGTTCTATCAACGAAATTGGGGCACAATTAAAAGTGAGGTAGTCAAGGCAGTTCATAATTTCTTCATCATAGGAGTGATGCCGGAGGGGATAAATGACACAACAATTGTTTTGATTCCGAAGATTAAGCAGCCCACCCAACTGAAGGACTACCGGCTGATCAGCCTCTGTAATGTCATTTATAAAGTGGTGAGCAAATGTCTGGTTAACAGGCTGAGACCGTTCCTAGATGAACTGGTTTCGCCTAATCAAAGTGCTTTTGTCCCTGAGCGTCTTATAACTGACAATGCTCTAGTAGCTTTTGAGTGTTTCCATTTCATACAAAAGAACAAGAATCCAAACAAGGCTGCATGTGCTTACAAGTTGGACCTGTCCAAGGCTTACAACAGGGTAGATTGGGGGTTTTTGGAGCAAGCAATGCACAAGATGGGTTTCGCTCACCGGTGGGTTAGTTGGATAATGTTGTGTGTAACCACAGTGAGATACTCTGTGAAATTCAATGGGACCTTGTTAAGTGCATTCGCTCCAACAAGAGGTTTACGCCAGGGCGATCCTCTCTCTCCATTTCTTTTCCTGTTTGTGGCTGATGGATTGTCACTCCTTCTAGAGGAAAAAGTTAGGCAAGGAGCTATTTTGCCTCTTCACGTTTGCCGACGGGCACCAGGGATCTCTCACTTATTGTTCGCTGATGATACCCTACTGTTTTTTGAAGCAGTGAAAGAGCAGGCTGTGGCAATCAAGCAAGTGCTGAATGACTTTGCCACAAGCACTGGCCAATTGATTAACCCGTCGAATGATATCAGATCGATTTTGCAAGTTGGTGATAATGGTTTCGATGACAGATACCTGGGGTTTCCGACACCGGAGGGTAGAATGAAGAAAGGGCATTTCCAGAGTTTACAAGAGAAGGCAAAGTACTATCCCAACGGTTCCATCGTTGACACCTGTTTCAGCGGGAATGCTTCACCTGGGTGGAGAGGAATTGAACATGGGTTGGAGCTACTCAAGAAAGGAATTATTTGGCGGGTGGGTAACAGACAGTCCATAAGAGTATGGCGAGATCCCTGGTTACCGAGAGATTATTCCAGACGGCCCATCACCCGCAAAGGTAATTGTCGTATCAAGTGGGTGTCGGATTTGCTACAGGATGATGGAACTTGGAGGGTTGATAAAGTGCAGGAACACTTTTGGCCGATAGATGTAGAAATGATCCTGAAGATTCGCACCTCAGCTTCACTTGAATCCAATTTTTTGGCTTGGCATCCTGATAGATTGGGAAAATTCTCGGTCAGGAGTGTGTACCACTTGGTCGTTTCGCTTGCAGAGACCGGTGATTGCTCCAGTTCTACAGAGGTGCTAGTAAATAAATCTTGGAAGCGTATCTGGGCGTGCAATGTCCCACAAAAAGTCAGAATCTTCGCTTGGAAGGCTATATCTAATAGTCTCCCCACAATGAAGAACAAAAAGAAGAGGAATCTGGAGTTGTTGAGCACTTGCTGCATATGTGGAGCCGAGGAAGAGGATGTTGCCCATGCGCTTTGTCATTGTCAGCAAGCGAGGAACCTGTGGTCGGCTATGTATTCTGCGAGAGCCATCTCTCATGACGTGAATAGTGCTTGGTCCGGGACGGATTGGATCCTGAACCTTTTGGAGGTGCTCCCAAAGGAAGAGGATGCCATGTTTCTCATGCTAATGTGGCGCATTTGGCATAACAGAAATGAGATCACCCATGGTAAATCAATTGCGCCAGTGGCTGTCTCTCAGAGATTCATCTTTAGTTATGTTAGCTCGCTAACTACTATTAAGCAGTACCCTCAAGCTGACATAATTAAAGGTAAACAGGTGGCACACCCGGACCGCATTAGGCTTCCCAGCCAAGCTCCCCCCGCAGTCAGTTCGCCTAGGCGCTGGGAGAAACCGAGCACAAGGTGGATGAAATTGAACGTTGATGGATCCTTTCAGGCTTCGGATGGTAAAGGTGGAATTGGGGCTGTTTTTAGAGACAGCTCTGGAAATGTTATTTTTGCTGCCTGTGGGGAGGGTATTGCAATGGCGCTTCAATGGACGTTCCTGCCTTTCATTGTGGAAACTGATTGCTTAGAGGTGTTTAATCTAATTCAATCAAAAGAGAAGGTGCTGTCCGAGTTAGCTTTTGTTGTCAAGGAGGTTCAGGTCCTCATGACAGGCAACAGGGAGATTAAAGTCAGGAAGGAGTCCCGTGATCAGAATAGTGGGCCCTTCCTTGCTAACAAGGGAAGATGTGAGGCCTTAACTTCTTTCTGGCCTGATAACACTTGTAATCTCATTTCACATCTCATCGATGTGGACTCAATTGAGTAA
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| Protein seq | MSCLSWNFRGLGNAATVRDLCGLVKEADSQIVFLSETRQKADRIRRLRNRLGLRGFAGVDSDGMSGGLALYWHESVNVEIKALCERYIDAYVRLSPDGPLWHATFVYGEPRVENRHNMWSMLRSVRNSSNLPWLVIGDFNEALWQFEHFSSHPRGEPQMGTPFTYDNKRQGRNNVRVRLDRAIADNAWRDTFPNATLAHLASPRSDHCPISLQLSQEMKQPARKKILHYEICWEREPSLPEVVQESWVEAGTKSELGDISAALRKVMASLHSWSKVKFKNIGRELQKARKKLAELLETYADSAAVRQASDHMNELLYREEMLWLQCSRINWLKEDDRNTRFFHSKAVWRAKKNRIQSLKDSAGTVHRSATAMEQLATEYFQEVYSADPSLDHISAQMNEALCSNLTEEEISTTIFQIGPLKAPGPDGFPARFYQRNWGTIKSEVVKAVHNFFIIGVMPEGINDTTIVLIPKIKQPTQLKDYRLISLCNVIYKVVSKCLVNRLRPFLDELVSPNQSAFVPERLITDNALVAFECFHFIQKNKNPNKAACAYKLDLSKAYNRVDWGFLEQAMHKMGFAHRWVSWIMLCVTTVRYSVKFNGTLLSAFAPTRGLRQGDPLSPFLFLFVADGLSLLLEEKVRQGAILPLHVCRRAPGISHLLFADDTLLFFEAVKEQAVAIKQVLNDFATSTGQLINPSNDIRSILQVGDNGFDDRYLGFPTPEGRMKKGHFQSLQEKAKYYPNGSIVDTCFSGNASPGWRGIEHGLELLKKGIIWRVGNRQSIRVWRDPWLPRDYSRRPITRKGNCRIKWVSDLLQDDGTWRVDKVQEHFWPIDVEMILKIRTSASLESNFLAWHPDRLGKFSVRSVYHLVVSLAETGDCSSSTEVLVNKSWKRIWACNVPQKVRIFAWKAISNSLPTMKNKKKRNLELLSTCCICGAEEEDVAHALCHCQQARNLWSAMYSARAISHDVNSAWSGTDWILNLLEVLPKEEDAMFLMLMWRIWHNRNEITHGKSIAPVAVSQRFIFSYVSSLTTIKQYPQADIIKGKQVAHPDRIRLPSQAPPAVSSPRRWEKPSTRWMKLNVDGSFQASDGKGGIGAVFRDSSGNVIFAACGEGIAMALQWTFLPFIVETDCLEVFNLIQSKEKVLSELAFVVKEVQVLMTGNREIKVRKESRDQNSGPFLANKGRCEALTSFWPDNTCNLISHLIDVDSIE
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0531575 | 0.165599 | 0.046394 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os11g38890 | RBH | 0.0 | 0.0 | 0.000000 |
| Nipponbare | IRGSP 1.0 | RAP-db | NA | NA | NA | NA | NA |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_11G0371000 | SBH | 0 | 0 | 0.030473 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_11g0015250 | SBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_10G0047100 | SBH | 0.0186605 | 0.034339 | 0.1445685 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_11g0015170 | SBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_11g0014610 | SBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
