Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsZS97_11G0329600 | OGI:11071060 | 7/16 | Zhenshan 97 | ZS97RS3 | HZAU | Chr11:23706968-23713019 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | TATACCCGGAAATTCTACGACAATGCGACACACTGCCACTCCAGCAGGCAGCAGCCAAACTCAAAGGCACAAGGCCGGATCGATGGGCTGAGTATTGTTGCGAACAAAATATGAAATCAGTAGAACTTGAACCTGCAAAGTGATAGTTAGCAGCAAGGTGGTTAATTAACAATGGCGGGAAAAAGGAAAGGTACTAGCCATTTCTAAGGTACTACTTCCTCCGTTTCACAATGTGAGTCATTCTAACATTTCTCATATTTATATTGATGTTATCTATCTAAATTCATTAACATCAATATTAATGTGAAAAATGTTAGAATGACTTACATTGTAAAACGGATGGAGTACTACTTAATTGAACACATATGTGCTGCATGAAAGAGATAAGCATGGTAATCAAGTTACCTCTGCAACTTGACGGTGGGGTTGTTGGGATTCACGGTGAGTGCTTTCCGGAGAGCATACTCCACTGCTTCTATCTCCTCAGGCACTGCACCAGAACAGTTCACAAGTTGAATGGAGGCATCCTGAAGTGAAGAGAGGTTCTCCAGGCCAAGATCCATGTTGCCTCCAAATAGCTCTTTGGTCTTCTTCACCTGAAAGCACAAACTGAGGGTACGGAGCTTTGGCATGGCTCCCTTGGCAAACGCCACCTCCATGGTGGCACTAGAGAGCCTGAACCATGTAAGGCCCATGAATGGATAGGCATCGCCAATGGTTAGTCTTTCATCTCTCTCCAATGTGGGTTCCTCCACTCTTATACGTAAATATCTAAGAGATGGTAGACTCCCAAGCACTTGAAGGTCCCCCTCTCCTAGTGTTTTCAATTGTATAGAAAGAGTGGAGACAGAGGATAGAGAAGCTTGCCAGTTTAGTACTGAGTGGATGCTGCTGTCGGGAATGTCAATAGTCGGACGTTGTTGAGGTCCCAATGACAAGCTGCTAGTAATTTTAAGGTCCCAGAGGTTGGTCAGCTTGGCTAGACACTGGAGGAAGGCTGCTTCATAGCTATTGTCCCACCAACCTTTGAAATCAATAGACAATCGCCTGAGCTCGGTCAGCCTACCGAGATCGTCGAGCATAGTTGGAGAATCGACAATGATATCCCCACCTAGCAATTCTTGTAGAGATTTCAGATTCCCGAACCCATCGGGTAGTCTCATCTTGGTGGTGAAAATCAAGCACTCTAGTTGTTCTAGTTGAACAAAGGTTGATGGCAGCTCTTTTATTCCAGTTTTAGCTATATATAGTACTTGCAGAAACCGTAGATTCTTGATCTCTCTTGGTAACTCTGTGATAGATGCACCCGATAGATCCAAAGACCTCAGGTGACGCAAGTTGCAAATGTCCTTAACATGCTGATTTTTAACTTGCACACAATTATTTAAACACAGTACACGTAAAGCTGGGAATGTTTTGCTCAAAGGGGTAGGCAGCAACTTGAATTCCCGGAGAACAATAAGTGACCTTGTGTGGGACAAGCTCATGGTTTCAAGCTTCTCAAGAGAATCTTCATGGCTAGTTTGGAGGGATAGTCGACGGACCTTGGAATTAATAGGCGAAAGATGCTGATCACGTAGCGTTGTTACAAAACACTCGCTATTTGACAAGGAAGCGATGAGATCATGCACCATATCATGCACACCGCAAAAGACTGCCTTGTTATCAATACCAACATCTATTGGTTTGATCAAGCTTTTGTTGATAAGTTCATTGAAGTAATCCTCTCCGACTTGATACATGCTCTTCCCTTGTTCATTGTGGACAAAACCTTCACATACCCATAGCCTTATCAAGTGTTCTCTAGCAATATGATAATCCTCTGGATATAAACATAGATACAATAGACATGTTTTTAGATGTGGAGGTAGGTCATAATAACTAACTGATAATATCCTTCTCATGTCATTAATGTCGGGATTATCTTCGAGACCAGAACCCATAGTGCGGCATAACTTGGACCAGTACATAAGCTCATCTTCCTTCCCCAATTTACTTGCCAACACACTAGCTATGGTAAGGATAGCCAATGGTACTCCACCGCATTTTTTCAAGATGACCTCAGATGCTTTTGCCAAATGACTAGGACATGTGTCTTCAGGACCAAATATTCTTAGATAGAATAACTTTCTGGAGTCATCTAGAGAAAGAGGTGTCATTTGATAAACACCACTGACTTGTTTAGCAACATCATGAATACGAGTTGTCACGATTATTCGACTTCCTTTTTTATTCTCAAATAAAGAGTATTTGATTCTTTCCCATGCTGATTTGTCCCAGATGTCATCTATAACAATTAAATACCTATAAGAAAATACAAATAAGAAAAATATCAACAAATTTCTCAACAGTGCTTTGATGTAAAATATCAGCATGTCTCAGTAAGCTTTGGTGTAACTCATTGGTTGGAGCAACATGGCACTACTAACAGGTGGGTTTGTTACAATTCCCCCTTAACCCAGCACAGTGGCGAAGCTAGGATTTGAGGTTTGGGGGTGGGGGTAAGCAATAAGGCCGAATAACCAAAATCAATAGTAAAGGAGGCCAAACAGTCACTGTCAATAATAATCAATATGTAAACTAGTTCTTTAAAAAAACTTGATTTTTAGCTCTTTAATAATATCATTGGAAGTTTTGGAACTAGTTCTTATTTCTAAATCCTTTCAATGTAAACTACTAAAAAAAATCCTGGGACATATGAAAGTGAAGTGACAAAAATGAGGTGTTGATCCGCATTACTTCACTAATCTCTTTCATTAATTAGTTTTGTAGAACCTGTTTTTTGCTAATGGGCTAATGTTTTTCCTAGACTTGTTAACTGCCTGACCTTGTACATATGTCGTACAGCAGCAGCACCGCGGGGGGGGGGGGGGGGGGGGGGGGAGGTGTGGTTGGTGTTGGCCCCCTCCGGCACCCCCGGCAGCTCCGCCAATGACCCAGCTCTTCCAAGCAGTGGGCCTACATATATGTGGTACTGTACTTGCACTTTTCTTATCGCTTAGGGTTAACTGGAAGTTATGTTGTCGTTAATATAGGCGCGGGGATATCAGGACCATAGCGAGGAGGCTGCCCCTAGTAGCCACGTGCCCCCCCCCCTCGCCGCGGGGGAGGGGGGTTCGGGCCCGATGCAGGGCGGCGTCCGCCCCCTCCATTTCTGGGAGTTGGGCTCCTCCGACCCCCTCCGCGCGGTGCCGCGTGTGCTGGGTTAGGTGGGCACCCCCAACGCCCACCTAACCGCATTTAAAGCAATGTAAGCGGGCGCACCGCGCTGCATTGAATGTGACGTGTGGTGCCTGGCCGGACTGTGACCGGTCTGCGACTGGTCGAATGACCGATGTGGCCAGGGTAGTGTGCTTGCACACTGGTTGCATGTTAGGCAGAGTACCGCCTGACACCCTATGTCACGTCGTGATGATGCCTCTCATCACAGCCGGAGACGGTTTGCCTAACCCGGTCAGGGTAGGGTTTTCGTTTCCCGGCGCAAGTGAGGACCTAAAATTCTTCACTCATTAAATGCTGAATGACGTACGTGTCCCCCGTGTCAGCTGGATAGATTTGATGGGCCCCACGCCGCAGCAAGGTGTGCAAGAGACTTCCAAGGCAAGCAACAAGACATGTATTTAATGTGATTACCCTCCCTAGATAGGCTCAGTGGATCCATGTGGTAACCCCTTGAGATATAAAAGGAGATCTAGGCCCACTTAGGGAGTGGATGAGCCCTTTTCATGAGAGCAGTCTTGTGCCCCTCATCATCAACACCTTCTACTCCAACAAGAAGATCTTGTAATTTCCTAGGCAATCAGCTAAGCATAGGAGTAGGGTTTTAAGCTTCTCAGCGGCCTGAACCTGTATAAACCCCTTTTATCTCATCGTTGTTGAGGGGCCCGACCCCCTCTACGTCACACTTCTCTCAGGGTCCTCGAATCTCACCCGCTGCCCCCGGCCGAACCAACAAGAGGGGCATCACTCCCCCGCTTCACCCTCCGACAAATGTATACTATATGGTTAGAAAACCAAACCTTATAATTAAGCTGACCCTCAGTCACCTAAACTTACAAGGTAATAGTAAACCCACCACCTACTACAACCCTAGCTGGATCATATGGGCTAACAACAAGCACTACTCTATTATGGTTGTTTACGGGCTACAACGTTACATTTGTGCGCTCCTTCAGAAAAGTTGAGGAAACATATCACAAAGTTGTTGTTATAGTGACAAACTTGTACATCTTAATTTCTAACTTCTCTATTAGTGTATTAGGCAATTCTTCCTCCTTTCCTAAAGAAGACAAAAATATGTATTCACTATTGTAGCTGTCCTAATTATCTTATCCCATTGAACCCTACATCGCCAACTATATGGATATATCTATCTATTGTAACCCTAGAAGAACCACATCGTCCCTGCTCCATAGATCTTTCACTCATGGCTTTAATATGTTTCAGTCATTAATAAATAAATTATCTATAACGCTAATTATTCATGTTTTCCCATGGAGAGAATCAAATCCACCAAGTCAGCAACCTACAAGGTCGTGTCGCCTCATTTCCAATATAATATACAATGTCCTTCAGGATTGTAGCGTTGATTTTCATACTTGCCTTTTAACTTTAACATTTCTAACAAACAAGGAAGCATAGATCAGTTGAATTTGCAAGAGACATACTCCCTCTCGTTCTATATTAATTAACGTTTTGGACAAGGTTGAGGTTAAACTTTTATAACTTTGACCATCAATAACTTTAAAAATATTTAGTTTAAAGAAACTAAAAAAACATATATAGATTTGTCTTTCAAAACACTATAATAAAAGTAAACATGCATTTATTTATTGTATATATTATAATAGAAAAATAAGGTCAAAGGTATATCTTGTAGAGCGTGTCATTGTCCAAAGCGTCAATTAAAATGAAACCGGAGGGAATATTCATATTTGATGATTTCCAATCGCACCAACCAGAACATAACCAAGTGTACACCATGCTTCACAAGATACCTTTAGTTATTCCAATCTTAAATGACAAGGGCGCATGCTAGTTTCTTTAACTAATTAAATATGAGGCCATGATGATCATAGTTAATATGGGTACCTTTTTCACTTCAATTTACTGACGATTAACAAAGAAAAATAAGTAATTTTACGGTACTTGAGGAGGTACCATGAGGTACCAAATTTTACACTAATTTTTTGGTACCTCATAGTACTTAGGTACCAAAAGATACTAAATTTACAATAGAAAAAGTGGTACCTCATAGTACCTCCTCAAGGACTATAAAATTACTCAAGAAAAATACACAAACAAATATATAAACCAACCATACACACCTTTTGTCTCGAAGGAATTCTCTCAGTTCGATGAGGAGGTATTCTTCACTCCATGTTGCCTGGTAGATGTCACTATACTTGTCTTTGTCAAGTCGATGGAGCATATCCTTGAATATCTTCTCCATGTTAGGAGTACGAGAGACTGAAACAAAGGCAACACGATCAAATTGCATTTTAAGCCTGTCATACACAACCTTAGCAATAGTTGTTTTGCCTATTCCTCCAAACCCAACAATAGAGACTATCCTCATCTGTTTCTTCGACATCTCATCCCCTTCCATTAGCCTTTTGGCTAGCTCATTGCTCTTCTCATCAGTTCCAACGAGCTCTTTTGCTCTTTTATACAGAGCTCGTAGACGAAGACTATCAACAGTTGGGTAAACAGGTTTGGCCACAACAGCATCAACCTTGTACCTGTTCCGACGCGCGCTCACCTCTTTGGCGCGGCTATTGATTTGTTCGATGTCGATGCCAATGTTGTAGCGAATCTTTGCTCTGGTCAACAACTTCATGCTTCTGTCAATGAAACCCCTAAAGCTGTTGTTTGATGCACGTGTGTCGATGAGCACCGTGAATTTGTCAACACAGTCCTCTATGTCATAAGAAAGCTCCTTAACATCCCTAGCCCAAAGCTTCGATTGATTGTCGGGCGGTTGGTCAATTGATGCCTCAGAAATCTTGAGGAGGGCAGCCTCCATGCTCTCCAACTCAGCTTTCAAGAACAT
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| CDS seq | ATGTTCTTGAAAGCTGAGTTGGAGAGCATGGAGGCTGCCCTCCTCAAGATTTCTGAGGCATCAATTGACCAACCGCCCGACAATCAATCGAAGCTTTGGGCTAGGGATGTTAAGGAGCTTTCTTATGACATAGAGGACTGTGTTGACAAATTCACGGTGCTCATCGACACACGTGCATCAAACAACAGCTTTAGGGGTTTCATTGACAGAAGCATGAAGTTGTTGACCAGAGCAAAGATTCGCTACAACATTGGCATCGACATCGAACAAATCAATAGCCGCGCCAAAGAGGTGAGCGCGCGTCGGAACAGGTACAAGGTTGATGCTGTTGTGGCCAAACCTGTTTACCCAACTGTTGATAGTCTTCGTCTACGAGCTCTGTATAAAAGAGCAAAAGAGCTCGTTGGAACTGATGAGAAGAGCAATGAGCTAGCCAAAAGGCTAATGGAAGGGGATGAGATGTCGAAGAAACAGATGAGGATAGTCTCTATTGTTGGGTTTGGAGGAATAGGCAAAACAACTATTGCTAAGGTTGTGTATGACAGGCTTAAAATGCAATTTGATCGTGTTGCCTTTGTTTCAGTCTCTCGTACTCCTAACATGGAGAAGATATTCAAGGATATGCTCCATCGACTTGACAAAGACAAGTATAGTGACATCTACCAGGCAACATGGAGTGAAGAATACCTCCTCATCGAACTGAGAGAATTCCTTCGAGACAAAAGGTATTTAATTGTTATAGATGACATCTGGGACAAATCAGCATGGGAAAGAATCAAATACTCTTTATTTGAGAATAAAAAAGGAAGTCGAATAATCGTGACAACTCGTATTCATGATGTTGCTAAACAAGTCAGTGGTGTTTATCAAATGACACCTCTTTCTCTAGATGACTCCAGAAAGTTATTCTATCTAAGAATATTTGGTCCTGAAGACACATGTCCTAGTCATTTGGCAAAAGCATCTGAGGTCATCTTGAAAAAATGCGGTGGAGTACCATTGGCTATCCTTACCATAGCTAGTGTGTTGGCAAGTAAATTGGGGAAGGAAGATGAGCTTATGTACTGGTCCAAGTTATGCCGCACTATGGGTTCTGGTCTCGAAGATAATCCCGACATTAATGACATGAGAAGGATATTATCAGTTAGTTATTATGACCTACCTCCACATCTAAAAACATGTCTATTGTATCTATGTTTATATCCAGAGGATTATCATATTGCTAGAGAACACTTGATAAGGCTATGGGTATGTGAAGGTTTTGTCCACAATGAACAAGGGAAGAGCATGTATCAAGTCGGAGAGGATTACTTCAATGAACTTATCAACAAAAGCTTGATCAAACCAATAGATGTTGGTATTGATAACAAGGCAGTCTTTTGCGGTGTGCATGATATGGTGCATGATCTCATCGCTTCCTTGTCAAATAGCGAGTGTTTTGTAACAACGCTACGTGATCAGCATCTTTCGCCTATTAATTCCAAGGTCCGTCGACTATCCCTCCAAACTAGCCATGAAGATTCTCTTGAGAAGCTTGAAACCATGAGCTTGTCCCACACAAGGTCACTTATTGTTCTCCGGGAATTCAAGTTGCTGCCTACCCCTTTGAGCAAAACATTCCCAGCTTTACGTGTACTGTGTTTAAATAATTGTGTGCAAGTTAAAAATCAGCATGTTAAGGACATTTGCAACTTGCGTCACCTGAGGTCTTTGGATCTATCGGGTGCATCTATCACAGAGTTACCAAGAGAGATCAAGAATCTACGGTTTCTGCAAGTACTATATATAGCTAAAACTGGAATAAAAGAGCTGCCATCAACCTTTGTTCAACTAGAACAACTAGAGTGCTTGATTTTCACCACCAAGATGAGACTACCCGATGGGTTCGGGAATCTGAAATCTCTACAAGAATTGCTAGGTGGGGATATCATTGTCGATTCTCCAACTATGCTCGACGATCTCGGTAGGCTGACCGAGCTCAGGCGATTGTCTATTGATTTCAAAGGTTGGTGGGACAATAGCTATGAAGCAGCCTTCCTCCAGTGTCTAGCCAAGCTGACCAACCTCTGGGACCTTAAAATTACTAGCAGCTTGTCATTGGGACCTCAACAACGTCCGACTATTGACATTCCCGACAGCAGCATCCACTCAGTACTAAACTGGCAAGCTTCTCTATCCTCTGTCTCCACTCTTTCTATACAATTGAAAACACTAGGAGAGGGGGACCTTCAAGTGCTTGGGAGTCTACCATCTCTTAGATATTTACGTATAAGAGTGGAGGAACCCACATTGGAGAGAGATGAAAGACTAACCATTGGCGATGCCTATCCATTCATGGGCCTTACATGGTTCAGGCTCTCTAGTGCCACCATGGAGGTGGCGTTTGCCAAGGGAGCCATGCCAAAGCTCCGTACCCTCAGTTTGTGCTTTCAGGTGAAGAAGACCAAAGAGCTATTTGGAGGCAACATGGATCTTGGCCTGGAGAACCTCTCTTCACTTCAGGATGCCTCCATTCAACTTGTGAACTGTTCTGGTGCAGTGCCTGAGGAGATAGAAGCAGTGGAGTATGCTCTCCGGAAAGCACTCACCGTGAATCCCAACAACCCCACCGTCAAGTTGCAGAGGTTCAAGTTCTACTGA
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| Protein seq | MFLKAELESMEAALLKISEASIDQPPDNQSKLWARDVKELSYDIEDCVDKFTVLIDTRASNNSFRGFIDRSMKLLTRAKIRYNIGIDIEQINSRAKEVSARRNRYKVDAVVAKPVYPTVDSLRLRALYKRAKELVGTDEKSNELAKRLMEGDEMSKKQMRIVSIVGFGGIGKTTIAKVVYDRLKMQFDRVAFVSVSRTPNMEKIFKDMLHRLDKDKYSDIYQATWSEEYLLIELREFLRDKRYLIVIDDIWDKSAWERIKYSLFENKKGSRIIVTTRIHDVAKQVSGVYQMTPLSLDDSRKLFYLRIFGPEDTCPSHLAKASEVILKKCGGVPLAILTIASVLASKLGKEDELMYWSKLCRTMGSGLEDNPDINDMRRILSVSYYDLPPHLKTCLLYLCLYPEDYHIAREHLIRLWVCEGFVHNEQGKSMYQVGEDYFNELINKSLIKPIDVGIDNKAVFCGVHDMVHDLIASLSNSECFVTTLRDQHLSPINSKVRRLSLQTSHEDSLEKLETMSLSHTRSLIVLREFKLLPTPLSKTFPALRVLCLNNCVQVKNQHVKDICNLRHLRSLDLSGASITELPREIKNLRFLQVLYIAKTGIKELPSTFVQLEQLECLIFTTKMRLPDGFGNLKSLQELLGGDIIVDSPTMLDDLGRLTELRRLSIDFKGWWDNSYEAAFLQCLAKLTNLWDLKITSSLSLGPQQRPTIDIPDSSIHSVLNWQASLSSVSTLSIQLKTLGEGDLQVLGSLPSLRYLRIRVEEPTLERDERLTIGDAYPFMGLTWFRLSSATMEVAFAKGAMPKLRTLSLCFQVKKTKELFGGNMDLGLENLSSLQDASIQLVNCSGAVPEEIEAVEYALRKALTVNPNNPTVKLQRFKFY |
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| Function | Disease resistance protein RGA5 [UniProtKB/Swiss-Prot:Q2R8L1] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsZS97_11G0329600 | OsZS97_11T0329600.1 | Chr11 | 23706968 | 23713019 | - | makerRMon | ||
| CDS seq | ATGTTCTTGAAAGCTGAGTTGGAGAGCATGGAGGCTGCCCTCCTCAAGATTTCTGAGGCATCAATTGACCAACCGCCCGACAATCAATCGAAGCTTTGGGCTAGGGATGTTAAGGAGCTTTCTTATGACATAGAGGACTGTGTTGACAAATTCACGGTGCTCATCGACACACGTGCATCAAACAACAGCTTTAGGGGTTTCATTGACAGAAGCATGAAGTTGTTGACCAGAGCAAAGATTCGCTACAACATTGGCATCGACATCGAACAAATCAATAGCCGCGCCAAAGAGGTGAGCGCGCGTCGGAACAGGTACAAGGTTGATGCTGTTGTGGCCAAACCTGTTTACCCAACTGTTGATAGTCTTCGTCTACGAGCTCTGTATAAAAGAGCAAAAGAGCTCGTTGGAACTGATGAGAAGAGCAATGAGCTAGCCAAAAGGCTAATGGAAGGGGATGAGATGTCGAAGAAACAGATGAGGATAGTCTCTATTGTTGGGTTTGGAGGAATAGGCAAAACAACTATTGCTAAGGTTGTGTATGACAGGCTTAAAATGCAATTTGATCGTGTTGCCTTTGTTTCAGTCTCTCGTACTCCTAACATGGAGAAGATATTCAAGGATATGCTCCATCGACTTGACAAAGACAAGTATAGTGACATCTACCAGGCAACATGGAGTGAAGAATACCTCCTCATCGAACTGAGAGAATTCCTTCGAGACAAAAGGTATTTAATTGTTATAGATGACATCTGGGACAAATCAGCATGGGAAAGAATCAAATACTCTTTATTTGAGAATAAAAAAGGAAGTCGAATAATCGTGACAACTCGTATTCATGATGTTGCTAAACAAGTCAGTGGTGTTTATCAAATGACACCTCTTTCTCTAGATGACTCCAGAAAGTTATTCTATCTAAGAATATTTGGTCCTGAAGACACATGTCCTAGTCATTTGGCAAAAGCATCTGAGGTCATCTTGAAAAAATGCGGTGGAGTACCATTGGCTATCCTTACCATAGCTAGTGTGTTGGCAAGTAAATTGGGGAAGGAAGATGAGCTTATGTACTGGTCCAAGTTATGCCGCACTATGGGTTCTGGTCTCGAAGATAATCCCGACATTAATGACATGAGAAGGATATTATCAGTTAGTTATTATGACCTACCTCCACATCTAAAAACATGTCTATTGTATCTATGTTTATATCCAGAGGATTATCATATTGCTAGAGAACACTTGATAAGGCTATGGGTATGTGAAGGTTTTGTCCACAATGAACAAGGGAAGAGCATGTATCAAGTCGGAGAGGATTACTTCAATGAACTTATCAACAAAAGCTTGATCAAACCAATAGATGTTGGTATTGATAACAAGGCAGTCTTTTGCGGTGTGCATGATATGGTGCATGATCTCATCGCTTCCTTGTCAAATAGCGAGTGTTTTGTAACAACGCTACGTGATCAGCATCTTTCGCCTATTAATTCCAAGGTCCGTCGACTATCCCTCCAAACTAGCCATGAAGATTCTCTTGAGAAGCTTGAAACCATGAGCTTGTCCCACACAAGGTCACTTATTGTTCTCCGGGAATTCAAGTTGCTGCCTACCCCTTTGAGCAAAACATTCCCAGCTTTACGTGTACTGTGTTTAAATAATTGTGTGCAAGTTAAAAATCAGCATGTTAAGGACATTTGCAACTTGCGTCACCTGAGGTCTTTGGATCTATCGGGTGCATCTATCACAGAGTTACCAAGAGAGATCAAGAATCTACGGTTTCTGCAAGTACTATATATAGCTAAAACTGGAATAAAAGAGCTGCCATCAACCTTTGTTCAACTAGAACAACTAGAGTGCTTGATTTTCACCACCAAGATGAGACTACCCGATGGGTTCGGGAATCTGAAATCTCTACAAGAATTGCTAGGTGGGGATATCATTGTCGATTCTCCAACTATGCTCGACGATCTCGGTAGGCTGACCGAGCTCAGGCGATTGTCTATTGATTTCAAAGGTTGGTGGGACAATAGCTATGAAGCAGCCTTCCTCCAGTGTCTAGCCAAGCTGACCAACCTCTGGGACCTTAAAATTACTAGCAGCTTGTCATTGGGACCTCAACAACGTCCGACTATTGACATTCCCGACAGCAGCATCCACTCAGTACTAAACTGGCAAGCTTCTCTATCCTCTGTCTCCACTCTTTCTATACAATTGAAAACACTAGGAGAGGGGGACCTTCAAGTGCTTGGGAGTCTACCATCTCTTAGATATTTACGTATAAGAGTGGAGGAACCCACATTGGAGAGAGATGAAAGACTAACCATTGGCGATGCCTATCCATTCATGGGCCTTACATGGTTCAGGCTCTCTAGTGCCACCATGGAGGTGGCGTTTGCCAAGGGAGCCATGCCAAAGCTCCGTACCCTCAGTTTGTGCTTTCAGGTGAAGAAGACCAAAGAGCTATTTGGAGGCAACATGGATCTTGGCCTGGAGAACCTCTCTTCACTTCAGGATGCCTCCATTCAACTTGTGAACTGTTCTGGTGCAGTGCCTGAGGAGATAGAAGCAGTGGAGTATGCTCTCCGGAAAGCACTCACCGTGAATCCCAACAACCCCACCGTCAAGTTGCAGAGGTTCAAGTTCTACTGA
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| Protein seq | MFLKAELESMEAALLKISEASIDQPPDNQSKLWARDVKELSYDIEDCVDKFTVLIDTRASNNSFRGFIDRSMKLLTRAKIRYNIGIDIEQINSRAKEVSARRNRYKVDAVVAKPVYPTVDSLRLRALYKRAKELVGTDEKSNELAKRLMEGDEMSKKQMRIVSIVGFGGIGKTTIAKVVYDRLKMQFDRVAFVSVSRTPNMEKIFKDMLHRLDKDKYSDIYQATWSEEYLLIELREFLRDKRYLIVIDDIWDKSAWERIKYSLFENKKGSRIIVTTRIHDVAKQVSGVYQMTPLSLDDSRKLFYLRIFGPEDTCPSHLAKASEVILKKCGGVPLAILTIASVLASKLGKEDELMYWSKLCRTMGSGLEDNPDINDMRRILSVSYYDLPPHLKTCLLYLCLYPEDYHIAREHLIRLWVCEGFVHNEQGKSMYQVGEDYFNELINKSLIKPIDVGIDNKAVFCGVHDMVHDLIASLSNSECFVTTLRDQHLSPINSKVRRLSLQTSHEDSLEKLETMSLSHTRSLIVLREFKLLPTPLSKTFPALRVLCLNNCVQVKNQHVKDICNLRHLRSLDLSGASITELPREIKNLRFLQVLYIAKTGIKELPSTFVQLEQLECLIFTTKMRLPDGFGNLKSLQELLGGDIIVDSPTMLDDLGRLTELRRLSIDFKGWWDNSYEAAFLQCLAKLTNLWDLKITSSLSLGPQQRPTIDIPDSSIHSVLNWQASLSSVSTLSIQLKTLGEGDLQVLGSLPSLRYLRIRVEEPTLERDERLTIGDAYPFMGLTWFRLSSATMEVAFAKGAMPKLRTLSLCFQVKKTKELFGGNMDLGLENLSSLQDASIQLVNCSGAVPEEIEAVEYALRKALTVNPNNPTVKLQRFKFY
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.013054 | 0.2718495 | 0.0069685 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_11g0550500 | SBH | 0.123558 | 0.382721 | 2.032062 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os11g34920 | SBH | 0.083556 | 0.257411 | 0.523092 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os11g0550500 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_11g0017070 | SBH | 0.218990 | 1.866706 | 2.530927 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_11g0017160 | SBH | 0.000000 | 0.000000 | 0.000000 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_11g0017010 | SBH | 0.000000 | 1.615474 | 1.787284 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_11g0016660 | SBH | 0.000000 | 0.000000 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_11g0016940 | SBH | 2.187675 | 1.089475 | 5.508959 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_11G0321600 | SBH | 0.438799 | 2.9802755 | 1.530538 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_11g0017380 | RBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | NA | NA | NA | NA | NA |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_11g0017280 | SBH | 0.175401 | 0.176676 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_11g0017250 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_11g0016770 | SBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_11g0016630 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_11g0016830 | RBH | 0.0 | 0.499155 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_11G016750 | RBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_11g0017090 | RBH | 0.0 | 0.0 | 0.0 |
