Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsZS97_11G0325700 | OGI:11059860 | 16/16 | Zhenshan 97 | ZS97RS3 | HZAU | Chr11:23429261-23434629 | ||||||||
| Gene Symbol | ABCE2, OsABCE2, RLI | ||||||||||
| DNA seq | GGCCTTCCCCATCCCCCTCCGCCGCGCCGCACGTGTCCACCACACTCCCAAAGCCAAAGGAGATACCCCCTCCCTCCCTTCTCTTCCTCTCCTCCTCACCGCAGCTATCGGGGAGCGCCGCCGCCGCCGCCACCGCCGCCACCGCTAGGCTTTCCTTCCTCTTCCCCCACCAGAAGCTTCTCGCCGGAGAAGGAAAGGAGGAGGAGAGATGGCGGAGCGGCTGACGCGTATCGCGATCGTCAGCGAGGACAAGTGCAAGCCCAAGAAGTGTCGCCAGGAGTGCAAGAAGAGCTGCCCCGTCGTCAAGACCGGTAATCCCTTCCCCTTCCCCTCCACACCCTCACTCGGTGGGGCAACTCGAGGAGGCGAGTGGTCTCCCCGTGCCGACGCAATCGAGGCGTAGATCGATCCCCGGGAGAGGCTTCGCCATTTTTGCGCGGGGTCAGATCCGGGGAGATAGGGCGCGGTTAAGGTTTAGGGTGGTACCCTGTAAGTTTTGCAGCTTCTGGGGTTGTGCCACAGCTGTTTGTTTTAGAGACTAGATTGGAATTCTTCATACATACACAGTGCTAGTATTAGTTTAATTTTGTGTGTGCTGCGATATCATGTAAAGTTCCAGCTTCCAAACGAGCACGCAAGCTGCGGTTCCTAGTTGTTTCATAATCTTGCCGCTTGATATGCCGTGCGCTAAGGCTGGCGATATGAGTTTCCTGTTTTGAGATTGTATATGTGGTATGGCGATTTTACAGGGAAGCTTTGCATCGAAGTAACTCCGGCGTCGAAGCTTGCGTTCATTTCTGAAGAGCTGTGTATTGGTTGTGGTATTTGCGTTAAGGTATGTTTGCTGCTATTATACATACGCATGGAACTAGGATATGTCTTTGTTCTGTAATGTATGTTTCTCACTTCCGCTATGATCTTTGTTGCAGAAATGCCCGTTTGATGCCATTGAGATTATCAACCTTCCTAAGGATTTGGAAAAAGATACTACTCATCGCTATGGTCCAAACACCTTCAAATTGCACAGGTATTGATGTTTGATTTGAGGAGCTGTGTTGATATGAACTTTTGCATTTTTTTAATCCAAGTATTACTGTAATTTAGGTGAAACCATATCTTTGGATAGTTACTGATTTAGCACTTGCAGGTTGCCCGTCCCAAGACCTGGTCAAGTTTTAGGCCTTGTTGGGACAAATGGAATTGGAAAGTCGACAGCACTCAAAGTGTTAGCTGGCAAGCTCAAGCCTAATTTGGGACGATTTAAAGTATATATTTTTACCTCGTGCTCAATTTCTCTGTTGCTGACTGTTAAATTATGTGTTCTCATAGAAAGTTGACTTCCTTCCTTTCCTTTTATACTGATACAAGTAATGGGAATCCACCTATATTTGTTGCAGAATCCACCAGACTGGCAGGAAATTCTGACATACTTCCGTGGGTCTGAACTCCAAAACTATTTTACACGCATATTGGAGGATAACCTTAAGGTATTGCATTGCCACTTCTTTTTATCCATTGTGTTTGTCCTTCTTTTAGGCTTTTTTAGCATGTACTCTGCGACAGTAATAAATATCTTAATTTGTCGTTTACCATCACTATGTGTGGGCCTGAGTACAATAGCATCAGTGAGGTATTTGTTTCAGTCTTATTTTTGGTTCTATAGCATCATACATTTTTCTGGTAAACTTTTGTATGCATGCAAACAGTAACAACACATAGCGTCAGCAAGATACTATTGATCTTCCACTTATGCAACCTGCATTAAATTATGCACTCAAATATTGTCCGAATCTCAGGTATTAAATATTGCTTTGATTTATTACATGTCAAAAAACCCTTAGTAGCCAAAAAACAGATATTCTGGCATTGGAATAGACTGTCGCTATGTTTGATATTATCAGTATTGATTGCTTCATACTTCTATTAACTTACATGCATGCTGACATGCTCTATTTCTCTTTCCTAGGCAATCATCAAGCCTCAGTATGTGGATCACATTCCAAAAGCTGTCCAGGGAAATGTTGGGCAAGTACTTGACCAGAAAGACGAGAGAGGCGTGAAAGCTGAGCTTTGTGTCGACCTTGAATTGAACCAAGTTATTGATCGAAATGTAGGAGATCTTTCTGGTGGTGAGCTCCAGAGATTTGCGATAGCAGTTGTTGCTGTGCAGAATGCGGAAATTTTCATGTTTGATGAGCCATCAAGTTACCTTGATGTTAAGCAGAGGCTTAAGGCTGCACAAGTCGTTCGGTCTTTGCTTAGACCCAACAGGTAACATATTCGTTATGTTATTACTATGATTATGTAAATTTAAACTTTGACGAATGCAATATCAAGTTCTATCCTATGTATTTTCAGCTATGTGATTGTTGTGGAGCATGATTTGAGTGTCCTGGATTACTTGTCCGACTTTATTTGCTGCTTGTATGGGAAGCCAGGTGCTTATGGTGTAGTTACTTTGCCGTTTTCGGTCCGAGAAGGTATCAATATTTTCTTGGCCGGATTTGTTCCAACAGAAAATCTACGGTTTCGAGATGAATCTCTTACTTTTAAGGTAACCTGTGCCTTTTCAGATTTAGATCTTTGGCTATGTGATGAAACATTGTTTTTATGTATGTTCTGTCCTTTCAGATTGCGGAGACTCAGGAAAGTGCTGAGGAGATTGAGACATACCAGCGATATAAGTACCCTACTATGAGTAAAACACAGGGCAATTTCAAGCTCACTGTTGTTGAGGGTGAGTTCACTGATTCACAGATTGTTGTGATGCTTGGTGAGAATGGGACAGGGAAAACTACATTCATCAGAATGCTGGTACGCCACCCTTCCTCTGTAACTACCCTAATCTTCAGTTCAAAATCAATCAACTAAATCTGCAGTTATCTTTCTGATTTGTTATGAATGGATAGGCTGGGTTGTTGAAGCCAGACACTGTGGAAGGAACTGAGATTGAAATTCCTGAATTTAATGTGTCCTACAAGCCTCAGAAGATTAGCCCGAAATTCCAGCATTCTGTGAGGCACTTGCTTCATCAGAAAATACGGGATTCATATACTCATCCTCAGTTTGTGTCTGATGTCATGAAGCCACTGCAAATAGAGCAACTCATGGACCAGGAAGTTATCAATTTATCAGGTGGTGAGCTACAAAGGGTGGCAATATGCCTTTGCCTTGGAAAGGTAAATAGATGTTTCTTCTGACAAATATAATACACCATTTTTGTGCCTTTTAAAAGTTTTAAGACTTCATGACCTGTCTAGTTATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATTTCACATACTATATGCTCATTTGGCTTTTGTGACCAAATCTTCTAGGTCTGCATTTATGTTCCTGCAATGTTTTTTAAAATTATATTTGCATCAAGAACAACAATACATAGACCGTAATTCGTATGATATTTCTTCCTGTTTTATGTGGGATTTCAGAATGCATTAAACTACGGATACATGCACATGGTCTTTCTAAACCTGTCACTGATGGATTTCAATGAGTTCTATTCCTTGCTCTTCTCAGAAATGCCATTTTGGAATCTGTTTTAGTTGGCTTAGAACACATTTTATCCATTTATATCCTTTGATGTGGACCTGGTGTGGCTCAATCTGTTTTGCTAGATGACATTGGAGTTAGATATTTGTATTGTTGTATGTTTTACTTAAGCATAGAATGACTCAAGAAATAATTATTTTTCCTGTGGGCCTACTGTCATGGGGTAGATCATAAGAGGAGGGAGATAAATCAATCTGAAATTTGTAACACTGATTAGACAATGGTCTTGAATTTGGAGACTTGTAGTGCTACAGATCTCAGTCGCGGTGTGCTTTTCTCATAAAATAACAATCAAAGAATATGTCTTGTATTATTTACTCTTGTTTGCACTTTTGAAGCCTCTGAATAATGGCTATGAACAATCCAATTGATGATCCACCTAACATATCCGTAGTACTTTCATGTGGCTAAGCACCTAAATGCTGTATTGCCTATATAAATATTGACTTGATTGTCATCTTATTGATACTTGCAATGTGGTATATGTTCAGCCTGCAGATATCTATCTGATTGATGAACCAAGTGCCTATCTTGATTCGGAGCAGCGCATTGTTGCTTCGAAGGTTATCAAAAGATTCATCCTTCATGCAAAGAAAACTGCATTTATTGTGGAGCATGATTTCATCATGGCTACCTACTTAGCTGACAAGGTCATTGTTTATGAGGGGCGGCCTTCTATCGACTGTACTGCCAATGCACCACAGTCTTTGGTATCTGGGATGAATAAGTTCTTATCGGTAAGTTCTGAATATTAAATATTGAGAAGAGATCCACAAGTTTGTTGTAATACCATCTCGCATCCTTGTCTTTGGTTCAGTTGTAGGCAACTTCCTCAAAAGATTAATTTTTCAGTAGAGTTTGACATTCTATATCTGTTTTTAGTTGTCGAAAGATGTCCCACTTCTGTTTATTTTTCAGAGTATTTCATTTATGTTTTCACATGCTAATGCTTTCTTTTGTTTTTCCTTTTGTGCATGATAGCATCTTGACATTACTTTTAGAAGAGACCCAACCAACTATAGGCCAAGAATAAACAAACTGGACTCCACAAAAGACAGGGAACAAAAGTCTGCAGGATCCTACTACTACCTTGATGACTAATTTGAAGGCGTACAGGTTCCTACAGCTCTCATTTATGCTGGATTAGTTTCATATCATTTTTTAATTCTTATTTTCACTTATTAAGTAATTTCGTTTTTCTTTTGCCTTGCTGTGCAGAATCTTCTTGTGGAGCTTCCCGCCCATAATTTGCCCAGGCCTTCGATGTCCTACGCATTACTTATTCAGAAGGTTACTTTGAAGCTACCACAGCTTGAAGCATGCTAAATAACTTGGCTGCAGGAGTGAAGTGGTATCATCATCAGTTATAAGGCTGAGCATGTGATGCTGACACTTGAGTTCTTTTGCTGGTTTGATATATATGATGATGGGAAAGAGAGATGTTACTGTTAAACTGAGCAACTTTGTCAGGATCGGAAGATTGTGAATTTTTGTGTATTTTGCATTATTGTATCGTGGATTTACCAACTGGCACCCTTAAATCGTTGGTTTTATAGGCATAAAGTTTTTGAGCTGTTACTCATGTTACCAATGTTATCAAAGTTTTCTGAGTTATTACTGTTAATTCACTTTATCGAGATAATAACGTAGTTTGTCTTTTTTTTATTCAGATTTTTAAAAATCTGTATTAGACAAAACCGAGGTTTTTCTTTGTTTTGATCGGATGCCAGATTCATTTGCTTGTGTTTA
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| CDS seq | ATGGCGGAGCGGCTGACGCGTATCGCGATCGTCAGCGAGGACAAGTGCAAGCCCAAGAAGTGTCGCCAGGAGTGCAAGAAGAGCTGCCCCGTCGTCAAGACCGGGAAGCTTTGCATCGAAGTAACTCCGGCGTCGAAGCTTGCGTTCATTTCTGAAGAGCTGTGTATTGGTTGTGGTATTTGCGTTAAGAAATGCCCGTTTGATGCCATTGAGATTATCAACCTTCCTAAGGATTTGGAAAAAGATACTACTCATCGCTATGGTCCAAACACCTTCAAATTGCACAGGTTGCCCGTCCCAAGACCTGGTCAAGTTTTAGGCCTTGTTGGGACAAATGGAATTGGAAAGTCGACAGCACTCAAAGTGTTAGCTGGCAAGCTCAAGCCTAATTTGGGACGATTTAAAAATCCACCAGACTGGCAGGAAATTCTGACATACTTCCGTGGGTCTGAACTCCAAAACTATTTTACACGCATATTGGAGGATAACCTTAAGGCAATCATCAAGCCTCAGTATGTGGATCACATTCCAAAAGCTGTCCAGGGAAATGTTGGGCAAGTACTTGACCAGAAAGACGAGAGAGGCGTGAAAGCTGAGCTTTGTGTCGACCTTGAATTGAACCAAGTTATTGATCGAAATGTAGGAGATCTTTCTGGTGGTGAGCTCCAGAGATTTGCGATAGCAGTTGTTGCTGTGCAGAATGCGGAAATTTTCATGTTTGATGAGCCATCAAGTTACCTTGATGTTAAGCAGAGGCTTAAGGCTGCACAAGTCGTTCGGTCTTTGCTTAGACCCAACAGCTATGTGATTGTTGTGGAGCATGATTTGAGTGTCCTGGATTACTTGTCCGACTTTATTTGCTGCTTGTATGGGAAGCCAGGTGCTTATGGTGTAGTTACTTTGCCGTTTTCGGTCCGAGAAGGTATCAATATTTTCTTGGCCGGATTTGTTCCAACAGAAAATCTACGGTTTCGAGATGAATCTCTTACTTTTAAGATTGCGGAGACTCAGGAAAGTGCTGAGGAGATTGAGACATACCAGCGATATAAGTACCCTACTATGAGTAAAACACAGGGCAATTTCAAGCTCACTGTTGTTGAGGGTGAGTTCACTGATTCACAGATTGTTGTGATGCTTGGTGAGAATGGGACAGGGAAAACTACATTCATCAGAATGCTGGCTGGGTTGTTGAAGCCAGACACTGTGGAAGGAACTGAGATTGAAATTCCTGAATTTAATGTGTCCTACAAGCCTCAGAAGATTAGCCCGAAATTCCAGCATTCTGTGAGGCACTTGCTTCATCAGAAAATACGGGATTCATATACTCATCCTCAGTTTGTGTCTGATGTCATGAAGCCACTGCAAATAGAGCAACTCATGGACCAGGAAGTTATCAATTTATCAGGTGGTGAGCTACAAAGGGTGGCAATATGCCTTTGCCTTGGAAAGCCTGCAGATATCTATCTGATTGATGAACCAAGTGCCTATCTTGATTCGGAGCAGCGCATTGTTGCTTCGAAGGTTATCAAAAGATTCATCCTTCATGCAAAGAAAACTGCATTTATTGTGGAGCATGATTTCATCATGGCTACCTACTTAGCTGACAAGGTCATTGTTTATGAGGGGCGGCCTTCTATCGACTGTACTGCCAATGCACCACAGTCTTTGGTATCTGGGATGAATAAGTTCTTATCGCATCTTGACATTACTTTTAGAAGAGACCCAACCAACTATAGGCCAAGAATAAACAAACTGGACTCCACAAAAGACAGGGAACAAAAGTCTGCAGGATCCTACTACTACCTTGATGACTAA
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| Protein seq | MAERLTRIAIVSEDKCKPKKCRQECKKSCPVVKTGKLCIEVTPASKLAFISEELCIGCGICVKKCPFDAIEIINLPKDLEKDTTHRYGPNTFKLHRLPVPRPGQVLGLVGTNGIGKSTALKVLAGKLKPNLGRFKNPPDWQEILTYFRGSELQNYFTRILEDNLKAIIKPQYVDHIPKAVQGNVGQVLDQKDERGVKAELCVDLELNQVIDRNVGDLSGGELQRFAIAVVAVQNAEIFMFDEPSSYLDVKQRLKAAQVVRSLLRPNSYVIVVEHDLSVLDYLSDFICCLYGKPGAYGVVTLPFSVREGINIFLAGFVPTENLRFRDESLTFKIAETQESAEEIETYQRYKYPTMSKTQGNFKLTVVEGEFTDSQIVVMLGENGTGKTTFIRMLAGLLKPDTVEGTEIEIPEFNVSYKPQKISPKFQHSVRHLLHQKIRDSYTHPQFVSDVMKPLQIEQLMDQEVINLSGGELQRVAICLCLGKPADIYLIDEPSAYLDSEQRIVASKVIKRFILHAKKTAFIVEHDFIMATYLADKVIVYEGRPSIDCTANAPQSLVSGMNKFLSHLDITFRRDPTNYRPRINKLDSTKDREQKSAGSYYYLDD |
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| Function | ABC transporter E family member 2 [UniProtKB/Swiss-Prot:Q8LPJ4] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsZS97_11G0325700 | OsZS97_11T0325700-mRNA-1 | Chr11 | 23429261 | 23434629 | + | makerRMon | ||
| CDS seq | ATGGCGGAGCGGCTGACGCGTATCGCGATCGTCAGCGAGGACAAGTGCAAGCCCAAGAAGTGTCGCCAGGAGTGCAAGAAGAGCTGCCCCGTCGTCAAGACCGGGAAGCTTTGCATCGAAGTAACTCCGGCGTCGAAGCTTGCGTTCATTTCTGAAGAGCTGTGTATTGGTTGTGGTATTTGCGTTAAGAAATGCCCGTTTGATGCCATTGAGATTATCAACCTTCCTAAGGATTTGGAAAAAGATACTACTCATCGCTATGGTCCAAACACCTTCAAATTGCACAGGTTGCCCGTCCCAAGACCTGGTCAAGTTTTAGGCCTTGTTGGGACAAATGGAATTGGAAAGTCGACAGCACTCAAAGTGTTAGCTGGCAAGCTCAAGCCTAATTTGGGACGATTTAAAAATCCACCAGACTGGCAGGAAATTCTGACATACTTCCGTGGGTCTGAACTCCAAAACTATTTTACACGCATATTGGAGGATAACCTTAAGGCAATCATCAAGCCTCAGTATGTGGATCACATTCCAAAAGCTGTCCAGGGAAATGTTGGGCAAGTACTTGACCAGAAAGACGAGAGAGGCGTGAAAGCTGAGCTTTGTGTCGACCTTGAATTGAACCAAGTTATTGATCGAAATGTAGGAGATCTTTCTGGTGGTGAGCTCCAGAGATTTGCGATAGCAGTTGTTGCTGTGCAGAATGCGGAAATTTTCATGTTTGATGAGCCATCAAGTTACCTTGATGTTAAGCAGAGGCTTAAGGCTGCACAAGTCGTTCGGTCTTTGCTTAGACCCAACAGCTATGTGATTGTTGTGGAGCATGATTTGAGTGTCCTGGATTACTTGTCCGACTTTATTTGCTGCTTGTATGGGAAGCCAGGTGCTTATGGTGTAGTTACTTTGCCGTTTTCGGTCCGAGAAGGTATCAATATTTTCTTGGCCGGATTTGTTCCAACAGAAAATCTACGGTTTCGAGATGAATCTCTTACTTTTAAGATTGCGGAGACTCAGGAAAGTGCTGAGGAGATTGAGACATACCAGCGATATAAGTACCCTACTATGAGTAAAACACAGGGCAATTTCAAGCTCACTGTTGTTGAGGGTGAGTTCACTGATTCACAGATTGTTGTGATGCTTGGTGAGAATGGGACAGGGAAAACTACATTCATCAGAATGCTGGCTGGGTTGTTGAAGCCAGACACTGTGGAAGGAACTGAGATTGAAATTCCTGAATTTAATGTGTCCTACAAGCCTCAGAAGATTAGCCCGAAATTCCAGCATTCTGTGAGGCACTTGCTTCATCAGAAAATACGGGATTCATATACTCATCCTCAGTTTGTGTCTGATGTCATGAAGCCACTGCAAATAGAGCAACTCATGGACCAGGAAGTTATCAATTTATCAGGTGGTGAGCTACAAAGGGTGGCAATATGCCTTTGCCTTGGAAAGCCTGCAGATATCTATCTGATTGATGAACCAAGTGCCTATCTTGATTCGGAGCAGCGCATTGTTGCTTCGAAGGTTATCAAAAGATTCATCCTTCATGCAAAGAAAACTGCATTTATTGTGGAGCATGATTTCATCATGGCTACCTACTTAGCTGACAAGGTCATTGTTTATGAGGGGCGGCCTTCTATCGACTGTACTGCCAATGCACCACAGTCTTTGGTATCTGGGATGAATAAGTTCTTATCGCATCTTGACATTACTTTTAGAAGAGACCCAACCAACTATAGGCCAAGAATAAACAAACTGGACTCCACAAAAGACAGGGAACAAAAGTCTGCAGGATCCTACTACTACCTTGATGACTAA
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| Protein seq | MAERLTRIAIVSEDKCKPKKCRQECKKSCPVVKTGKLCIEVTPASKLAFISEELCIGCGICVKKCPFDAIEIINLPKDLEKDTTHRYGPNTFKLHRLPVPRPGQVLGLVGTNGIGKSTALKVLAGKLKPNLGRFKNPPDWQEILTYFRGSELQNYFTRILEDNLKAIIKPQYVDHIPKAVQGNVGQVLDQKDERGVKAELCVDLELNQVIDRNVGDLSGGELQRFAIAVVAVQNAEIFMFDEPSSYLDVKQRLKAAQVVRSLLRPNSYVIVVEHDLSVLDYLSDFICCLYGKPGAYGVVTLPFSVREGINIFLAGFVPTENLRFRDESLTFKIAETQESAEEIETYQRYKYPTMSKTQGNFKLTVVEGEFTDSQIVVMLGENGTGKTTFIRMLAGLLKPDTVEGTEIEIPEFNVSYKPQKISPKFQHSVRHLLHQKIRDSYTHPQFVSDVMKPLQIEQLMDQEVINLSGGELQRVAICLCLGKPADIYLIDEPSAYLDSEQRIVASKVIKRFILHAKKTAFIVEHDFIMATYLADKVIVYEGRPSIDCTANAPQSLVSGMNKFLSHLDITFRRDPTNYRPRINKLDSTKDREQKSAGSYYYLDD
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsZS97_11G0325700 | OsZS97_11T0325700-mRNA-2 | Chr11 | 23429261 | 23434571 | + | makerRMon | ||
| CDS seq | ATGGCGGAGCGGCTGACGCGTATCGCGATCGTCAGCGAGGACAAGTGCAAGCCCAAGAAGTGTCGCCAGGAGTGCAAGAAGAGCTGCCCCGTCGTCAAGACCGGGAAGCTTTGCATCGAAGTAACTCCGGCGTCGAAGCTTGCGTTCATTTCTGAAGAGCTGTGTATTGGTTGTGGTATTTGCGTTAAGAAATGCCCGTTTGATGCCATTGAGATTATCAACCTTCCTAAGGATTTGGAAAAAGATACTACTCATCGCTATGGTCCAAACACCTTCAAATTGCACAGGTTGCCCGTCCCAAGACCTGGTCAAGTTTTAGGCCTTGTTGGGACAAATGGAATTGGAAAGTCGACAGCACTCAAAGTGTTAGCTGGCAAGCTCAAGCCTAATTTGGGACGATTTAAAAATCCACCAGACTGGCAGGAAATTCTGACATACTTCCGTGGGTCTGAACTCCAAAACTATTTTACACGCATATTGGAGGATAACCTTAAGGCAATCATCAAGCCTCAGTATGTGGATCACATTCCAAAAGCTGTCCAGGGAAATGTTGGGCAAGTACTTGACCAGAAAGACGAGAGAGGCGTGAAAGCTGAGCTTTGTGTCGACCTTGAATTGAACCAAGTTATTGATCGAAATGTAGGAGATCTTTCTGGTGGTGAGCTCCAGAGATTTGCGATAGCAGTTGTTGCTGTGCAGAATGCGGAAATTTTCATGTTTGATGAGCCATCAAGTTACCTTGATGTTAAGCAGAGGCTTAAGGCTGCACAAGTCGTTCGGTCTTTGCTTAGACCCAACAGCTATGTGATTGTTGTGGAGCATGATTTGAGTGTCCTGGATTACTTGTCCGACTTTATTTGCTGCTTGTATGGGAAGCCAGGTGCTTATGGTGTAGTTACTTTGCCGTTTTCGGTCCGAGAAGGTATCAATATTTTCTTGGCCGGATTTGTTCCAACAGAAAATCTACGGTTTCGAGATGAATCTCTTACTTTTAAGATTGCGGAGACTCAGGAAAGTGCTGAGGAGATTGAGACATACCAGCGATATAAGTACCCTACTATGAGTAAAACACAGGGCAATTTCAAGCTCACTGTTGTTGAGGGTGAGTTCACTGATTCACAGATTGTTGTGATGCTTGGTGAGAATGGGACAGGGAAAACTACATTCATCAGAATGCTGGCTGGGTTGTTGAAGCCAGACACTGTGGAAGGAACTGAGATTGAAATTCCTGAATTTAATGTGTCCTACAAGCCTCAGAAGATTAGCCCGAAATTCCAGCATTCTGTGAGGCACTTGCTTCATCAGAAAATACGGGATTCATATACTCATCCTCAGTTTGTGTCTGATGTCATGAAGCCACTGCAAATAGAGCAACTCATGGACCAGGAAGTTATCAATTTATCAGGTGGTGAGCTACAAAGGGTGGCAATATGCCTTTGCCTTGGAAAGCCTGCAGATATCTATCTGATTGATGAACCAAGTGCCTATCTTGATTCGGAGCAGCGCATTGTTGCTTCGAAGGTTATCAAAAGATTCATCCTTCATGCAAAGAAAACTGCATTTATTGTGGAGCATGATTTCATCATGGCTACCTACTTAGCTGACAAGGTCATTGTTTATGAGGGGCGGCCTTCTATCGACTGTACTGCCAATGCACCACAGTCTTTGGTATCTGGGATGAATAAGTTCTTATCGAATCTTCTTGTGGAGCTTCCCGCCCATAATTTGCCCAGGCCTTCGATGTCCTACGCATTACTTATTCAGAAGATTTTTAAAAATCTGTATTAG
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| Protein seq | MAERLTRIAIVSEDKCKPKKCRQECKKSCPVVKTGKLCIEVTPASKLAFISEELCIGCGICVKKCPFDAIEIINLPKDLEKDTTHRYGPNTFKLHRLPVPRPGQVLGLVGTNGIGKSTALKVLAGKLKPNLGRFKNPPDWQEILTYFRGSELQNYFTRILEDNLKAIIKPQYVDHIPKAVQGNVGQVLDQKDERGVKAELCVDLELNQVIDRNVGDLSGGELQRFAIAVVAVQNAEIFMFDEPSSYLDVKQRLKAAQVVRSLLRPNSYVIVVEHDLSVLDYLSDFICCLYGKPGAYGVVTLPFSVREGINIFLAGFVPTENLRFRDESLTFKIAETQESAEEIETYQRYKYPTMSKTQGNFKLTVVEGEFTDSQIVVMLGENGTGKTTFIRMLAGLLKPDTVEGTEIEIPEFNVSYKPQKISPKFQHSVRHLLHQKIRDSYTHPQFVSDVMKPLQIEQLMDQEVINLSGGELQRVAICLCLGKPADIYLIDEPSAYLDSEQRIVASKVIKRFILHAKKTAFIVEHDFIMATYLADKVIVYEGRPSIDCTANAPQSLVSGMNKFLSNLLVELPAHNLPRPSMSYALLIQKIFKNLY
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsZS97_11G0325700 | OsZS97_11T0325700-mRNA-3 | Chr11 | 23429261 | 23434629 | + | makerRMon | ||
| CDS seq | ATGGCGGAGCGGCTGACGCGTATCGCGATCGTCAGCGAGGACAAGTGCAAGCCCAAGAAGTGTCGCCAGGAGTGCAAGAAGAGCTGCCCCGTCGTCAAGACCGGGAAGCTTTGCATCGAAGTAACTCCGGCGTCGAAGCTTGCGTTCATTTCTGAAGAGCTGTGTATTGGTTGTGGTATTTGCGTTAAGAAATGCCCGTTTGATGCCATTGAGATTATCAACCTTCCTAAGGATTTGGAAAAAGATACTACTCATCGCTATGGTCCAAACACCTTCAAATTGCACAGGTTGCCCGTCCCAAGACCTGGTCAAGTTTTAGGCCTTGTTGGGACAAATGGAATTGGAAAGTCGACAGCACTCAAAGTGTTAGCTGGCAAGCTCAAGCCTAATTTGGGACGATTTAAAAATCCACCAGACTGGCAGGAAATTCTGACATACTTCCGTGGGTCTGAACTCCAAAACTATTTTACACGCATATTGGAGGATAACCTTAAGGCAATCATCAAGCCTCAGTATGTGGATCACATTCCAAAAGCTGTCCAGGGAAATGTTGGGCAAGTACTTGACCAGAAAGACGAGAGAGGCGTGAAAGCTGAGCTTTGTGTCGACCTTGAATTGAACCAAGTTATTGATCGAAATGTAGGAGATCTTTCTGGTGGTGAGCTCCAGAGATTTGCGATAGCAGTTGTTGCTGTGCAGAATGCGGAAATTTTCATGTTTGATGAGCCATCAAGTTACCTTGATGTTAAGCAGAGGCTTAAGGCTGCACAAGTCGTTCGGTCTTTGCTTAGACCCAACAGCTATGTGATTGTTGTGGAGCATGATTTGAGTGTCCTGGATTACTTGTCCGACTTTATTTGCTGCTTGTATGGGAAGCCAGGTGCTTATGGTGTAGTTACTTTGCCGTTTTCGGTCCGAGAAGGTATCAATATTTTCTTGGCCGGATTTGTTCCAACAGAAAATCTACGGTTTCGAGATGAATCTCTTACTTTTAAGATTGCGGAGACTCAGGAAAGTGCTGAGGAGATTGAGACATACCAGCGATATAAGTACCCTACTATGAGTAAAACACAGGGCAATTTCAAGCTCACTGTTGTTGAGGGTGAGTTCACTGATTCACAGATTGTTGTGATGCTTGGTGAGAATGGGACAGGGAAAACTACATTCATCAGAATGCTGCCTGCAGATATCTATCTGATTGATGAACCAAGTGCCTATCTTGATTCGGAGCAGCGCATTGTTGCTTCGAAGGTTATCAAAAGATTCATCCTTCATGCAAAGAAAACTGCATTTATTGTGGAGCATGATTTCATCATGGCTACCTACTTAGCTGACAAGGTCATTGTTTATGAGGGGCGGCCTTCTATCGACTGTACTGCCAATGCACCACAGTCTTTGGTATCTGGGATGAATAAGTTCTTATCGCATCTTGACATTACTTTTAGAAGAGACCCAACCAACTATAGGCCAAGAATAAACAAACTGGACTCCACAAAAGACAGGGAACAAAAGTCTGCAGGATCCTACTACTACCTTGATGACTAA
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| Protein seq | MAERLTRIAIVSEDKCKPKKCRQECKKSCPVVKTGKLCIEVTPASKLAFISEELCIGCGICVKKCPFDAIEIINLPKDLEKDTTHRYGPNTFKLHRLPVPRPGQVLGLVGTNGIGKSTALKVLAGKLKPNLGRFKNPPDWQEILTYFRGSELQNYFTRILEDNLKAIIKPQYVDHIPKAVQGNVGQVLDQKDERGVKAELCVDLELNQVIDRNVGDLSGGELQRFAIAVVAVQNAEIFMFDEPSSYLDVKQRLKAAQVVRSLLRPNSYVIVVEHDLSVLDYLSDFICCLYGKPGAYGVVTLPFSVREGINIFLAGFVPTENLRFRDESLTFKIAETQESAEEIETYQRYKYPTMSKTQGNFKLTVVEGEFTDSQIVVMLGENGTGKTTFIRMLPADIYLIDEPSAYLDSEQRIVASKVIKRFILHAKKTAFIVEHDFIMATYLADKVIVYEGRPSIDCTANAPQSLVSGMNKFLSHLDITFRRDPTNYRPRINKLDSTKDREQKSAGSYYYLDD
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsZS97_11G0325700 | OsZS97_11T0325700-mRNA-4 | Chr11 | 23429261 | 23434026 | + | makerRMon | ||
| CDS seq | ATGGCGGAGCGGCTGACGCGTATCGCGATCGTCAGCGAGGACAAGTGCAAGCCCAAGAAGTGTCGCCAGGAGTGCAAGAAGAGCTGCCCCGTCGTCAAGACCGGGAAGCTTTGCATCGAAGTAACTCCGGCGTCGAAGCTTGCGTTCATTTCTGAAGAGCTGTGTATTGGTTGTGGTATTTGCGTTAAGAAATGCCCGTTTGATGCCATTGAGATTATCAACCTTCCTAAGGATTTGGAAAAAGATACTACTCATCGCTATGGTCCAAACACCTTCAAATTGCACAGGTTGCCCGTCCCAAGACCTGGTCAAGTTTTAGGCCTTGTTGGGACAAATGGAATTGGAAAGTCGACAGCACTCAAAGTGTTAGCTGGCAAGCTCAAGCCTAATTTGGGACGATTTAAAAATCCACCAGACTGGCAGGAAATTCTGACATACTTCCGTGGGTCTGAACTCCAAAACTATTTTACACGCATATTGGAGGATAACCTTAAGGCAATCATCAAGCCTCAGTATGTGGATCACATTCCAAAAGCTGTCCAGGGAAATGTTGGGCAAGTACTTGACCAGAAAGACGAGAGAGGCGTGAAAGCTGAGCTTTGTGTCGACCTTGAATTGAACCAAGTTATTGATCGAAATGTAGGAGATCTTTCTGGTGGTGAGCTCCAGAGATTTGCGATAGCAGTTGTTGCTGTGCAGAATGCGGAAATTTTCATGTTTGATGAGCCATCAAGTTACCTTGATGTTAAGCAGAGGCTTAAGGCTGCACAAGTCGTTCGGTCTTTGCTTAGACCCAACAGCTATGTGATTGTTGTGGAGCATGATTTGAGTGTCCTGGATTACTTGTCCGACTTTATTTGCTGCTTGTATGGGAAGCCAGGTGCTTATGGTGTAGTTACTTTGCCGTTTTCGGTCCGAGAAGGTATCAATATTTTCTTGGCCGGATTTGTTCCAACAGAAAATCTACGGTTTCGAGATGAATCTCTTACTTTTAAGATTGCGGAGACTCAGGAAAGTGCTGAGGAGATTGAGACATACCAGCGATATAAGTACCCTACTATGAGTAAAACACAGGGCAATTTCAAGCTCACTGTTGTTGAGGGTGAGTTCACTGATTCACAGATTGTTGTGATGCTTGGTGAGAATGGGACAGGGAAAACTACATTCATCAGAATGCTGGCTGGGTTGTTGAAGCCAGACACTGTGGAAGGAACTGAGATTGAAATTCCTGAATTTAATGTGTCCTACAAGCCTCAGAAGATTAGCCCGAAATTCCAGCATTCTGTGAGGCACTTGCTTCATCAGAAAATACGGGATTCATATACTCATCCTCAGTTTGTGTCTGATGTCATGAAGCCACTGCAAATAGAGCAACTCATGGACCAGGAAGTTATCAATTTATCAGGTGGTGAGCTACAAAGGGTGGCAATATGCCTTTGCCTTGGAAAGCCTGCAGATATCTATCTGATTGATGAACCAAGTGCCTATCTTGATTCGGAGCAGCGCATTGTTGCTTCGAAGGTTATCAAAAGATTCATCCTTCATGCAAAGAAAACTGCATTTATTGTGGAGCATGATTTCATCATGGCTACCTACTTAGCTGACAAGGTCATTGTTTATGAGGGGCGGCCTTCTATCGACTGTACTGCCAATGCACCACAGTCTTTGGTATCTGGGATGAATAAGTTCTTATCGCATCTTGACATTACTTTTAGAAGAGACCCAACCAACTATAGGCCAAGAATAAACAAACTGGACTCCACAAAAGACAGGGAACAAAAGTCTGCAGGATCCTACTACTACCTTGATGACTAA
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| Protein seq | MAERLTRIAIVSEDKCKPKKCRQECKKSCPVVKTGKLCIEVTPASKLAFISEELCIGCGICVKKCPFDAIEIINLPKDLEKDTTHRYGPNTFKLHRLPVPRPGQVLGLVGTNGIGKSTALKVLAGKLKPNLGRFKNPPDWQEILTYFRGSELQNYFTRILEDNLKAIIKPQYVDHIPKAVQGNVGQVLDQKDERGVKAELCVDLELNQVIDRNVGDLSGGELQRFAIAVVAVQNAEIFMFDEPSSYLDVKQRLKAAQVVRSLLRPNSYVIVVEHDLSVLDYLSDFICCLYGKPGAYGVVTLPFSVREGINIFLAGFVPTENLRFRDESLTFKIAETQESAEEIETYQRYKYPTMSKTQGNFKLTVVEGEFTDSQIVVMLGENGTGKTTFIRMLAGLLKPDTVEGTEIEIPEFNVSYKPQKISPKFQHSVRHLLHQKIRDSYTHPQFVSDVMKPLQIEQLMDQEVINLSGGELQRVAICLCLGKPADIYLIDEPSAYLDSEQRIVASKVIKRFILHAKKTAFIVEHDFIMATYLADKVIVYEGRPSIDCTANAPQSLVSGMNKFLSHLDITFRRDPTNYRPRINKLDSTKDREQKSAGSYYYLDD
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 29.9306795 | 129.1349375 | 88.092373 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_11g0546000 | RBH | 7.734545 | 7.496171 | 23.950260 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os11g34350 | RBH | 4.793456 | 4.705912 | 5.646456 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os11g0546000 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_11g0016810 | RBH | 3.113214 | 48.453186 | 26.947773 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_11g0016760 | RBH | 0.360486 | 8.407589 | 11.992282 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_11g0016750 | RBH | 7.442171 | 34.325649 | 38.523315 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_11g0016270 | RBH | 0.787979 | 2.388222 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_11g0016670 | RBH | 26.391199 | 71.207199 | 92.165825 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_11G0316600 | RBH | 29.6598865 | 80.4375155 | 118.0245135 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_11g0017080 | RBH | 1.345157 | 4.071038 | 5.006459 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_01G0328000 | RBH | 0.574516 | 5.8467785 | 7.29647 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_11g0017020 | RBH | 0.548523 | 0.628301 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_11g0016880 | RBH | 2.862229 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_11g0016560 | RBH | 20.726679 | 53.376717 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_11g0016330 | RBH | 2.599910 | 0.0 | 7.730729 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_11g0016540 | RBH | 0.529605 | 35.094635 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_11G016450 | RBH | 2.549776 | 25.573061 | 11.050651 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_11g0016790 | RBH | 3.338945 | 78.358223 | 37.378464 |
