Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsZS97_11G0098600 | OGI:11017290 | 7/16 | Zhenshan 97 | ZS97RS3 | HZAU | Chr11:6227010-6228814 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | TTATGATTCGATCCTACAAGGAAGGTGCTGCAGCAACCTCCATTGGCATAGAGGCACCTTACAGGAGTCCACCTCCAGATTAGTTACTGGTGAAGAGGACGAGTAAGTATCAGTGCATCCAGCACCCCATGATGATATTACATTGTCACTGCTCTCTATCTTCCAGTCCACAGTTTTAGGTGGACATGGTTTTAGCTTCAATTTAGGGCAATTGCGTATTTCCAATCGCTGAAGTTTAGGGAACATCATTTCGTTCACAAAATCCTCACCGTAGGAGTATGTTGTGGTCCATTCTTCCAAGCTTTTCATGTAATATAATATAAATTTCACCAGTTGAGGAAATGCTCTCACACAGCCACAGAAATCGCCATCAATTTTTGTAATGCTGCTCATTGTTCCAAGAAACAGTTCTTGCAGGTTTTGTAATTGACCAAGTGCTGGCAAAATGTTGCACATAGGCAAATCCTCCAGCTTGATCTTGACAATATTGGGAACATAGTGACTAATGTTCATTAGCCAGCCTGGAAAGCTTATACTTTTATAACCCTGTAGGTCAAAGTGCTGTAAAGTGCTTGGTGGCAGAAGGTCTCTCAAGACATCAATGTCCTCCATAAATCTCTTTGCACTTGCACTCCACTGAAAAATCAGTTTTGAGATCCTCCGTTTTTCTGACAATTTTATTCCCAACGTTTCTTCTGCAGACTTCACATTTTCAAGACTACTTATCTTCAGCTCAGTAGGATTTGCATCCTGAAGCAATCCAATATTGCTGCTAAATTCACTATCACTAGCTTGGACCACAAAATGTGGCAACAAGATTAAGTTATTACTGAAGCAAGGTAGTGTAGACTTGTCTAAAGCACGACAGTCTGTCACAGTTAGGAACTTGAGGCTATCAATTTCACCTATACTTTTTGGTAACTGCATCAGGTTGCAGCATCCTGAGAGGTTAATTGTGTGCAGCATTCTCAGGCGACCAAGGCTTTCAGGTACACTATTGAGGCTGTTATTCTTAGACAAGTCTAGATGCTCCAGATTGCAAAGGGTGCCAACACACTCAATGAATCTGCAACTTTGATCTGTTGGTGCGCTGCCAAAGATAGTATCTATGCACTTTGATAAATTTAAATACCGTAGTTTGGTGAGATTACCCAGAATTTCTCGCAGACCTTTGAGATGCAATCTGCCTCGATAACTAGAGCAGTGTGATAAATTCAAATATTGGAGTTCTGTAAGGTTACTCATAGCTTCCGATACACCTTCAATACGTAACAGTCTGATAAATTTAGATGTATCAAGTTAGTTAGCTTACAAAATGATTCTGGGAGTTCTCGTATTCCCGAACAACCTGACAGATCAAGGTGCACCAGTCCTTCAATTTCACCTAATGACTTTGGCAGTGCTGTGACTCTAGCAGATCCAGAAAGGTTGAGGAAATATAATTTTGAGAGCTTGACAATGCTGAGAATATTTCGATCTTGAATCCCTGGAGCATTAAGATACCTCAAACGCTTTAGTTGACCAATAGAAGATGGAAAATTCTTAATAGAGCATGCACTTAGATCTAAGACACGCAGCCACTTAGCAGATGAAAATGCAGCACCATGAAGTTTGATGTTGCCACAATCCAGAAAATGCAGTACCCTTATCTGGGAAGGAAAAGTCACAAACAACTTCAATGGTTTCCTGCAATCTCTGAGCAATGCATAGCGGCAACTGGTTCTCTGAATTTTGCCTTTTGTGCTAGAATCCAGCAATTCATCAGCCATGATTGATCTTGCAACATCATGCACTAGGTCATGCAT
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| CDS seq | ATGCATGACCTAGTGCATGATGTTGCAAGATCAATCATGGCTGATGAATTGCTGGATTCTAGCACAAAAGGCAAAATTCAGAGAACCAGTTGCCGCTATGCATTGCTCAGAGATTGCAGGAAACCATTGAAGTTGTTTGTGACTTTTCCTTCCCAGATAAGGGTACTGCATTTTCTGGATTGTGGCAACATCAAACTTCATGGTGCTGCATTTTCATCTGCTAAGTGGCTGCGTGTCTTAGATCTAAGTGCATGCTCTATTAAGAATTTTCCATCTTCTATTGGTCAACTAAAGCGTTTGAGGTATCTTAATGCTCCAGGGATTCAAGATCGAAATATTCTCAGCATTGTCAAGCTCTCAAAATTATATTTCCTCAACCTTTCTGGATCTGCTAGAGTCACAGCACTGCCAAAGTCATTAGGTGAAATTGAAGGACTGGTGCACCTTGATCTGTCAGGTGTATCGGAAGCTATGAGTAACCTTACAGAACTCCAATATTTGAATTTATCACACTGCTCTAGTTATCGAGGCAGATTGCATCTCAAAGGTCTGCGAGAAATTCTGGGTAATCTCACCAAACTACGGTATTTAAATTTATCAAAGTGCATAGATACTATCTTTGGCAGCGCACCAACAGATCAAAGTTGCAGATTCATTGAGTGTGTTGGCACCCTTTGCAATCTGGAGCATCTAGACTTGTCTAAGAATAACAGCCTCAATAGTGTACCTGAAAGCCTTGGTCGCCTGAGAATGCTGCACACAATTAACCTCTCAGGATGCTGCAACCTGATGCAGTTACCAAAAAGTATAGGTGAAATTGATAGCCTCAAGTTCCTAACTGTGACAGACTGTCGTGCTTTAGACAAGTCTACACTACCTTGCTTCAGTAATAACTTAATCTTGTTGCCACATTTTGTGGTCCAAGCTAGTGATAGTGAATTTAGCAGCAATATTGGATTGCTTCAGGATGCAAATCCTACTGAGCTGAAGATAAGTAGTCTTGAAAATGTGAAGTCTGCAGAAGAAACGTTGGGAATAAAATTGTCAGAAAAACGGAGGATCTCAAAACTGATTTTTCAGTGGAGTGCAAGTGCAAAGAGATTTATGGAGGACATTGATGTCTTGAGAGACCTTCTGCCACCAAGCACTTTACAGCACTTTGACCTACAGGGTTATAAAAGTATAAGCTTTCCAGGCTGGCTAATGAACATTAGTCACTATGTTCCCAATATTGTCAAGATCAAGCTGGAGGATTTGCCTATGTGCAACATTTTGCCAGCACTTGGTCAATTACAAAACCTGCAAGAACTGTTTCTTGGAACAATGAGCAGCATTACAAAAATTGATGGCGATTTCTGTGGCTGTGTGAGAGCATTTCCTCAACTGGTGAAATTTATATTATATTACATGAAAAGCTTGGAAGAATGGACCACAACATACTCCTACGGTGAGGATTTTGTGAACGAAATGATGTTCCCTAAACTTCAGCGATTGGAAATACGCAATTGCCCTAAATTGAAGCTAAAACCATGTCCACCTAAAACTGTGGACTGGAAGATAGAGAGCAGTGACAATGTAATATCATCATGGGGTGCTGGATGCACTGATACTTACTCGTCCTCTTCACCAGTAACTAATCTGGAGGTGGACTCCTGTAAGGTGCCTCTATGCCAATGGAGGTTGCTGCAGCACCTTCCTTGTAGGATCGAATCATAA
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| Protein seq | MHDLVHDVARSIMADELLDSSTKGKIQRTSCRYALLRDCRKPLKLFVTFPSQIRVLHFLDCGNIKLHGAAFSSAKWLRVLDLSACSIKNFPSSIGQLKRLRYLNAPGIQDRNILSIVKLSKLYFLNLSGSARVTALPKSLGEIEGLVHLDLSGVSEAMSNLTELQYLNLSHCSSYRGRLHLKGLREILGNLTKLRYLNLSKCIDTIFGSAPTDQSCRFIECVGTLCNLEHLDLSKNNSLNSVPESLGRLRMLHTINLSGCCNLMQLPKSIGEIDSLKFLTVTDCRALDKSTLPCFSNNLILLPHFVVQASDSEFSSNIGLLQDANPTELKISSLENVKSAEETLGIKLSEKRRISKLIFQWSASAKRFMEDIDVLRDLLPPSTLQHFDLQGYKSISFPGWLMNISHYVPNIVKIKLEDLPMCNILPALGQLQNLQELFLGTMSSITKIDGDFCGCVRAFPQLVKFILYYMKSLEEWTTTYSYGEDFVNEMMFPKLQRLEIRNCPKLKLKPCPPKTVDWKIESSDNVISSWGAGCTDTYSSSSPVTNLEVDSCKVPLCQWRLLQHLPCRIES |
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| Function | Putative disease resistance protein At3g14460 [UniProtKB/Swiss-Prot:Q9LRR5] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsZS97_11G0098600 | OsZS97_11T0098600.1 | Chr11 | 6227010 | 6228814 | - | makerRMon | ||
| CDS seq | ATGCATGACCTAGTGCATGATGTTGCAAGATCAATCATGGCTGATGAATTGCTGGATTCTAGCACAAAAGGCAAAATTCAGAGAACCAGTTGCCGCTATGCATTGCTCAGAGATTGCAGGAAACCATTGAAGTTGTTTGTGACTTTTCCTTCCCAGATAAGGGTACTGCATTTTCTGGATTGTGGCAACATCAAACTTCATGGTGCTGCATTTTCATCTGCTAAGTGGCTGCGTGTCTTAGATCTAAGTGCATGCTCTATTAAGAATTTTCCATCTTCTATTGGTCAACTAAAGCGTTTGAGGTATCTTAATGCTCCAGGGATTCAAGATCGAAATATTCTCAGCATTGTCAAGCTCTCAAAATTATATTTCCTCAACCTTTCTGGATCTGCTAGAGTCACAGCACTGCCAAAGTCATTAGGTGAAATTGAAGGACTGGTGCACCTTGATCTGTCAGGTGTATCGGAAGCTATGAGTAACCTTACAGAACTCCAATATTTGAATTTATCACACTGCTCTAGTTATCGAGGCAGATTGCATCTCAAAGGTCTGCGAGAAATTCTGGGTAATCTCACCAAACTACGGTATTTAAATTTATCAAAGTGCATAGATACTATCTTTGGCAGCGCACCAACAGATCAAAGTTGCAGATTCATTGAGTGTGTTGGCACCCTTTGCAATCTGGAGCATCTAGACTTGTCTAAGAATAACAGCCTCAATAGTGTACCTGAAAGCCTTGGTCGCCTGAGAATGCTGCACACAATTAACCTCTCAGGATGCTGCAACCTGATGCAGTTACCAAAAAGTATAGGTGAAATTGATAGCCTCAAGTTCCTAACTGTGACAGACTGTCGTGCTTTAGACAAGTCTACACTACCTTGCTTCAGTAATAACTTAATCTTGTTGCCACATTTTGTGGTCCAAGCTAGTGATAGTGAATTTAGCAGCAATATTGGATTGCTTCAGGATGCAAATCCTACTGAGCTGAAGATAAGTAGTCTTGAAAATGTGAAGTCTGCAGAAGAAACGTTGGGAATAAAATTGTCAGAAAAACGGAGGATCTCAAAACTGATTTTTCAGTGGAGTGCAAGTGCAAAGAGATTTATGGAGGACATTGATGTCTTGAGAGACCTTCTGCCACCAAGCACTTTACAGCACTTTGACCTACAGGGTTATAAAAGTATAAGCTTTCCAGGCTGGCTAATGAACATTAGTCACTATGTTCCCAATATTGTCAAGATCAAGCTGGAGGATTTGCCTATGTGCAACATTTTGCCAGCACTTGGTCAATTACAAAACCTGCAAGAACTGTTTCTTGGAACAATGAGCAGCATTACAAAAATTGATGGCGATTTCTGTGGCTGTGTGAGAGCATTTCCTCAACTGGTGAAATTTATATTATATTACATGAAAAGCTTGGAAGAATGGACCACAACATACTCCTACGGTGAGGATTTTGTGAACGAAATGATGTTCCCTAAACTTCAGCGATTGGAAATACGCAATTGCCCTAAATTGAAGCTAAAACCATGTCCACCTAAAACTGTGGACTGGAAGATAGAGAGCAGTGACAATGTAATATCATCATGGGGTGCTGGATGCACTGATACTTACTCGTCCTCTTCACCAGTAACTAATCTGGAGGTGGACTCCTGTAAGGTGCCTCTATGCCAATGGAGGTTGCTGCAGCACCTTCCTTGTAGGATCGAATCATAA
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| Protein seq | MHDLVHDVARSIMADELLDSSTKGKIQRTSCRYALLRDCRKPLKLFVTFPSQIRVLHFLDCGNIKLHGAAFSSAKWLRVLDLSACSIKNFPSSIGQLKRLRYLNAPGIQDRNILSIVKLSKLYFLNLSGSARVTALPKSLGEIEGLVHLDLSGVSEAMSNLTELQYLNLSHCSSYRGRLHLKGLREILGNLTKLRYLNLSKCIDTIFGSAPTDQSCRFIECVGTLCNLEHLDLSKNNSLNSVPESLGRLRMLHTINLSGCCNLMQLPKSIGEIDSLKFLTVTDCRALDKSTLPCFSNNLILLPHFVVQASDSEFSSNIGLLQDANPTELKISSLENVKSAEETLGIKLSEKRRISKLIFQWSASAKRFMEDIDVLRDLLPPSTLQHFDLQGYKSISFPGWLMNISHYVPNIVKIKLEDLPMCNILPALGQLQNLQELFLGTMSSITKIDGDFCGCVRAFPQLVKFILYYMKSLEEWTTTYSYGEDFVNEMMFPKLQRLEIRNCPKLKLKPCPPKTVDWKIESSDNVISSWGAGCTDTYSSSSPVTNLEVDSCKVPLCQWRLLQHLPCRIES
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0149905 | 0.1978405 | 0.0896095 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_11g0212000 | SBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os11g10550 | SBH | 0.289328 | 0.288145 | 0.233684 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os11g0212000 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_11g0007040 | SBH | 0.127700 | 7.935719 | 1.423386 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_11g0007190 | RBH | 0.035596 | 2.082894 | 1.137845 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_11g0006940 | SBH | 0.311541 | 2.745398 | 2.220377 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_11g0006960 | SBH | 0.031958 | 0.046259 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_11g0007120 | SBH | 5.265685 | 12.773895 | 6.666517 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_11G0093800 | SBH | 0.9760985 | 15.4786595 | 5.625932 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_11g0007110 | SBH | 0.170104 | 0.251311 | 0.873241 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_11G0096100 | RBH | 2.7515195 | 12.279646 | 8.7577055 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_11g0007070 | RBH | 0.133190 | 0.032559 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_11g0007130 | SBH | 0.560330 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_11g0006970 | SBH | 1.186617 | 7.702504 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_Ung0064310 | RBH | 0.000000 | 0.0 | 0.525811 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_11g0007230 | SBH | 0.106816 | 2.635762 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_11G007100 | RBH | 0.460362 | 1.547215 | 1.200840 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_11g0006970 | RBH | 0.0 | 0.000000 | 0.000000 |
