Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsZS97_11G0074700 | OGI:11014070 | 16/16 | Zhenshan 97 | ZS97RS3 | HZAU | Chr11:4642950-4644472 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | ATGGACCCTATGACGTTCATGGTCACTAAGTGTTTGATGAAATGCCTTGAGTGCGACAGCAAGGTGACTATGTCTACAAACACCTATGAACTAGGGTTGGGCAACTGAGATTCACGACCAACACATGGGTTGGAATTTAGTTACTGCTGGGTCGAAGAGTTTAATTTGCCACCACGGCCACCGCCAATTGAAGTAAGTGATTTTGCTTTAGTAATTCAGAATATTGGATTACTTCCTACTAAGATGATGATTATAAACTTGCATTGGGCTGAGCTAAAACCATGGCCTCCACCAATTCGATTAAATCCATGGCCACCATATGATCTATCATTTCTAAATGCTCGTCAATTTATGATAATATCAGTCCTGGGGGTCTTATTTTGCTGAACATAGTGAAATTGCAAGAGGCTTGGAATTACATAGAAGTTAAGGTTCCATGGCTGTTACTTGACCAGGCAAGGTTTAAAGGAGTTCCAATGGATTATGCTATGGTTGGCCAGATCTCTAATATAAACGGAAAAAAAGTGTAGAATTCAGTTGGCTCACTTGTTTTTTGGGGTTGCTGTAATACAACATGTAGCAGTCAATAGTTGTGTTGGAGTTGGTGTTACCACATGGTTCACAACCCATGCCATGGCAATATTAAGAAGTGAAGATCAAATTACTGAGCACACGTACTGTCCAAAGTGGTATGTTTCTTGCACGATAGCACTGTATGTAGAGCAAATGAGGGCTCCGCATGTCCTGAATTGTTCAAGAAGTATGAAACATGTCATTCGAGTGGTACCTACGCTCAGATTGATTAGAAATGCAGTGGAAAGGGTGGTTGTTGAGTTATCTGTCAAGGTCGTGATTTATCAAATGGTGACAAGGTTGCTGCATTCATCGGAGAAGAAGAATGATGTGGTACCAGTGGTTTGGTGGAATACAGCTGGTTCTGAACTGCTGCAATTACCAAGGTTTTGTGTACATGTACTTGGTCCCGACAAGTTGCTAGCAATGATCTGCAAATTGCCATCCAGAGTAAGCACACAAGTTTCCATCCTCGATGAATTGGGTGACTACAAGAAGAACAGCAATACAGTTCATCCTTTTCATTTCAAGATGATCCAAGCTATAAATCTATTTGACGATGACAGACTTGCTAGTTGTATCCAAGAATTTCAGACACCCTGGGATCCTAGTGGCAGTGGTAACAATTTGCATCGGCTTGAGGACAATCCGAATGTTAAGAAGAGGGGATTGTTAGGAACCAAATGGGCTGCTAATGGGCATGTACTCAATTCACACAGGATGGTCCAAGTACATCCAAAGAAAGATATAAAAAAAACAACAACTGCTCTTCCAGGGGGCATCGAACAGAACAGGCGCGGCGACGGTGACCTGGAGGCCGGCTTGGCTCCTTGTCAAGTATCATTCTCCTTCCTCCACCTCTCCATTCCCCTAGCTTCTAGAACCTTCGAGCCCCTTGTATTGCTCCATCTTCCACCTCTAAAACACCACTATTGACTGGATAGTTGGTC
More
|
||||||||||
| CDS seq | ATGGACCCTATGACGTTCATGGTCACTAAGTGTTTGATGAAATGCCTTGAGTGCGACAGCAAGGTCGTGATTTATCAAATGGTGACAAGGTTGCTGCATTCATCGGAGAAGAAGAATGATGTGGTACCAGTGGTTTGGTGGAATACAGCTGGTTCTGAACTGCTGCAATTACCAAGGTTTTGTGTACATGTACTTGGTCCCGACAAGTTGCTAGCAATGATCTGCAAATTGCCATCCAGAGTAAGCACACAAGTTTCCATCCTCGATGAATTGGGTGACTACAAGAAGAACAGCAATACAGTTCATCCTTTTCATTTCAAGATGATCCAAGCTATAAATCTATTTGACGATGACAGACTTGCTAGTTGTATCCAAGAATTTCAGACACCCTGGGATCCTAGTGGCAGTGGTAACAATTTGCATCGGCTTGAGGACAATCCGAATGTTAAGAAGAGGGGATTGTTAGGAACCAAATGGGCTGCTAATGGGCATGTACTCAATTCACACAGGATGGTCCAAGTACATCCAAAGAAAGATATAAAAAAAACAACAACTGCTCTTCCAGGGGGCATCGAACAGAACAGGCGCGGCGACGGTGACCTGGAGGCCGGCTTGGCTCCTTGTCAAGTATCATTCTCCTTCCTCCACCTCTCCATTCCCCTAGCTTCTAGAACCTTCGAGCCCCTTGTATTGCTCCATCTTCCACCTCTAAAACACCACTATTGA
More
|
||||||||||
| Protein seq | MDPMTFMVTKCLMKCLECDSKVVIYQMVTRLLHSSEKKNDVVPVVWWNTAGSELLQLPRFCVHVLGPDKLLAMICKLPSRVSTQVSILDELGDYKKNSNTVHPFHFKMIQAINLFDDDRLASCIQEFQTPWDPSGSGNNLHRLEDNPNVKKRGLLGTKWAANGHVLNSHRMVQVHPKKDIKKTTTALPGGIEQNRRGDGDLEAGLAPCQVSFSFLHLSIPLASRTFEPLVLLHLPPLKHHY |
||||||||||
| Function | - | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsZS97_11G0074700 | OsZS97_11T0074700.1 | Chr11 | 4642950 | 4644472 | + | makerRMon | ||
| CDS seq | ATGGACCCTATGACGTTCATGGTCACTAAGTGTTTGATGAAATGCCTTGAGTGCGACAGCAAGGTCGTGATTTATCAAATGGTGACAAGGTTGCTGCATTCATCGGAGAAGAAGAATGATGTGGTACCAGTGGTTTGGTGGAATACAGCTGGTTCTGAACTGCTGCAATTACCAAGGTTTTGTGTACATGTACTTGGTCCCGACAAGTTGCTAGCAATGATCTGCAAATTGCCATCCAGAGTAAGCACACAAGTTTCCATCCTCGATGAATTGGGTGACTACAAGAAGAACAGCAATACAGTTCATCCTTTTCATTTCAAGATGATCCAAGCTATAAATCTATTTGACGATGACAGACTTGCTAGTTGTATCCAAGAATTTCAGACACCCTGGGATCCTAGTGGCAGTGGTAACAATTTGCATCGGCTTGAGGACAATCCGAATGTTAAGAAGAGGGGATTGTTAGGAACCAAATGGGCTGCTAATGGGCATGTACTCAATTCACACAGGATGGTCCAAGTACATCCAAAGAAAGATATAAAAAAAACAACAACTGCTCTTCCAGGGGGCATCGAACAGAACAGGCGCGGCGACGGTGACCTGGAGGCCGGCTTGGCTCCTTGTCAAGTATCATTCTCCTTCCTCCACCTCTCCATTCCCCTAGCTTCTAGAACCTTCGAGCCCCTTGTATTGCTCCATCTTCCACCTCTAAAACACCACTATTGA
More
|
|||||||
| Protein seq | MDPMTFMVTKCLMKCLECDSKVVIYQMVTRLLHSSEKKNDVVPVVWWNTAGSELLQLPRFCVHVLGPDKLLAMICKLPSRVSTQVSILDELGDYKKNSNTVHPFHFKMIQAINLFDDDRLASCIQEFQTPWDPSGSGNNLHRLEDNPNVKKRGLLGTKWAANGHVLNSHRMVQVHPKKDIKKTTTALPGGIEQNRRGDGDLEAGLAPCQVSFSFLHLSIPLASRTFEPLVLLHLPPLKHHY
More
|
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0 | 0.0074395 | 0.77026 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | MSU | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | RAP-db | NA | NA | NA | NA | NA |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_11g0005760 | RBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_11G0075000 | RBH | 0 | 0 | 0 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_11g0005810 | RBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | NA | NA | NA | NA | NA |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_11g0005760 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_11g0005840 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_11g0005860 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_11g0005870 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_11g0005850 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_11G005900 | RBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_11g0005710 | RBH | 0.0 | 0.0 | 0.0 |
