Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsZS97_10G0292200 | OGI:10052010 | 16/16 | Zhenshan 97 | ZS97RS3 | HZAU | Chr10:18659289-18662091 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | ATTATTATTACTCCATTTGCATAGTGCCAACAGTTGATACCCAAACATCTACTAGCTAGCTCTCGCCAACCCCTTTCCATGGCGAAAGTGATCAGCGTGTTCGTGAGCAACCTCCACCTAAGCCCAGCGGGCGTCCAGTTCCTTGCCGGCCTCACCACCTTCCTCATGGTGCTCCGTTTCGTGCTGGATTACAACCGCCATCGCTCCATCAGCCAGTCCATGAGGAATTTCCTGCTGATGCTAGACGGGATCACCTACTCGCTCCTGCACTACAGCCTCGGGGTGATGCAGCGGCCGTCGCTGAAGAACAGCTACTACCAGGTGTGGGCCGTGCTGCTCGTCACGCTCCGCTACAGCGTGAAGCACGGCCGCCCCGCCGGCGTGGCTCTCAAGCAGACGCCATTGGTGGACCTCATGTCCTCCTTCTGGGCTGCCAACATCCTCCGCTCGCACGCCCCGCGGCTGCTCAAGGTCCCCGTCTGGCTTCTCTGGTCCGTCAACTCCGCCAGGATCATCCATGGCTTCGTCTCCTCGGAGCACGCCACCGCTGAACACCGGGAGAACGTCCGCCTCGTGACGGAGTACATGCGCCGCCCCAAGACGACGCCGGCGTCCGAGTTTGACCCCGTGACGATGGCTGGCTACGAGTACTTGGTGCTGGGCGAAGCCAAACAGAGGAAGAAGGTGCAACCCCCGGATTACCGTCTCGAGCTGGATCAAACCAAGCTGGAAAAGCTCATCACCGTCGACAAGATTTGGAAGTGGTCGAGGGACAACGACGACGACCAGCAAGCGAAGCGCGTGTCGGAGCTCCTCAACCAGCGTGACGGCGAGCTCAAGGACCTCTGCCTCTCGTTCGCTCTCTACAAGCTGCTGCGCCGGAAGTTCTTCACTCTCCCTATCCACGAGGAGGATCTGCCAGAGACGAAGAGGCTCGTCTTCGAGGGAATCCTAGATTCTCCTGCCAGCAACAGCAAGCCGGAACCTTGGCTTGGACGACTCAAGAAGCTGTATCGAACGATGTTTTGTGTTCAAGGACAAGGAGATAATCAAGTCCAAGTCCAAGGAGCACTAGCAGTAGCAGCAGCAACACCAAACTACAAGCGAGCACTCCGCATCGCCAAGGTCGAGCTGGCCTTCGTCAACGACTTCTTCTTCAGCCGCCACGCGCTCATGTTCGCCACCGGCTTCCCGTTCCTGCGGCTCCTCCTGTCCACCCTCCTCCTCGGAGCCATCTCCTACATGGCCGTCGCCATCCACCGTTTCTCCAGGACCGCCACCGAGGACGAGCTCGGGAGGGTGCGCGTCCACCACGGGGTGTTCTTCACGTGGATCCTCCTCACGCTGCTCGGCGTCAAGGAGATGGTCGAGATCGCCAGCTACGTGTTCTCGGACTGGACCAAGGTGATGCTGCTGTGCAAGTACGTTCGGCAGCCGTGGTGGCTACGGGGCCCGGCGATGGCGAAGCTGGTGAGGCTGCTCTGCAGGTGCTCCCTCGTCAGAAGATGGGATGGGAAGATCGGGCAGTACAACCTCGTCTTCGCTAAAGGTCTACCAGACCTATTTCGGCTGGCTGATTTCACTGAAGATATGCAGGAAGCGATATTTACCTCTTTTGGGAAACTGAGGAACGACGTCCAATCTGGCAAGCAACCATTGGATGCGGATACGCCTTCTTACGTGGATAGGGCGTTACTACATATACCAACGGAAGGGGGGAAGGGTGCCCTTAAGAAAGCCATCAGCAAGGTACTAAAAGACTTAAAAGGAGATGTTCGCACTATACTGCTTTGGCACATCGCTACCTGTTACTGCGACTGCTACCTTGCTCACAGAAGAGAAATTGGTGTGAAGCCACGGTACCTTTCGAGCTTGAGGATTCGGTTTTGGCCTTTCAGGATTCGGTTCTTATTAGAATTCGGCATATGGGCAGGCCCATCGATCCAATGCTCGAAACGTGAATCACTCGGAAAGGCCAAGAAGCATTACATGACTGCTGTTACGCTGTCCCAGTACTGCGCACATCTGGTCAGGATGCCCTATCCTCTGATTCCAGGTAACGACATCGTCATCGATGCGGTGTTCAAACAAGTGCTCGGTGAAACCTGCCAGGCTCTCCATGGATGCGTTTACATCTCCGAAATATTTCCGAGGCTCGCGGAAATGGGCAGAAGCTGTCCAGGCAACGACGAGAGAACCTTGCTGCAGATGGGGTCACAGATTGGTCAGATGCTGATAGAAATCGCCGGTGACAATAACACGGCGGATGAATTTGTTTGGAAGTTCTTGGAGGAGCTCTGGGCGGGGTTCGTGCTGCACTTGGCCGAGTCCACGGTAGCTTCCAAGCACAAGATATACCTTAGCAGGGGAGGGGATCTCATGACGCATCTCTGGGCGCTGCTCTGCCATGCAGGGCGCAAGGGGAGGACCGAGCACGGCGAGATGGGACATGGGGAAGCATCGTACTACGAGGTTGATAGGGCAGGCTATGACATGAATACTTGAACATGCAGCACCTAGATCCTCCCAACCACCTGTTACTTATGCATTCTAATTAAGTTGTTTCCTCGTGGTTGTCTTGTCGTTAATGCATGCGTCAATTGAAGTTATATCCTCTTTTTTCTCGGTAACTTGAAGTTATGTACTTGTCCCTTGGCTCTATATGCTTATGTGAAGCTATATATGTAAAAGAGGGAGGTAAAGAAAAATAGGAAGTGTTGGCTCTCATGTAAGAGCTAACAAGCAAGAAATATGTATTAAATTCATAGTGAGGAAAAAGAGAAGATTGCAAAAATAAAACTAA
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| CDS seq | ATGGCGAAAGTGATCAGCGTGTTCGTGAGCAACCTCCACCTAAGCCCAGCGGGCGTCCAGTTCCTTGCCGGCCTCACCACCTTCCTCATGGTGCTCCGTTTCGTGCTGGATTACAACCGCCATCGCTCCATCAGCCAGTCCATGAGGAATTTCCTGCTGATGCTAGACGGGATCACCTACTCGCTCCTGCACTACAGCCTCGGGGTGATGCAGCGGCCGTCGCTGAAGAACAGCTACTACCAGGTGTGGGCCGTGCTGCTCGTCACGCTCCGCTACAGCGTGAAGCACGGCCGCCCCGCCGGCGTGGCTCTCAAGCAGACGCCATTGGTGGACCTCATGTCCTCCTTCTGGGCTGCCAACATCCTCCGCTCGCACGCCCCGCGGCTGCTCAAGGTCCCCGTCTGGCTTCTCTGGTCCGTCAACTCCGCCAGGATCATCCATGGCTTCGTCTCCTCGGAGCACGCCACCGCTGAACACCGGGAGAACGTCCGCCTCGTGACGGAGTACATGCGCCGCCCCAAGACGACGCCGGCGTCCGAGTTTGACCCCGTGACGATGGCTGGCTACGAGTACTTGGTGCTGGGCGAAGCCAAACAGAGGAAGAAGGTGCAACCCCCGGATTACCGTCTCGAGCTGGATCAAACCAAGCTGGAAAAGCTCATCACCGTCGACAAGATTTGGAAGTGGTCGAGGGACAACGACGACGACCAGCAAGCGAAGCGCGTGTCGGAGCTCCTCAACCAGCGTGACGGCGAGCTCAAGGACCTCTGCCTCTCGTTCGCTCTCTACAAGCTGCTGCGCCGGAAGTTCTTCACTCTCCCTATCCACGAGGAGGATCTGCCAGAGACGAAGAGGCTCGTCTTCGAGGGAATCCTAGATTCTCCTGCCAGCAACAGCAAGCCGGAACCTTGGCTTGGACGACTCAAGAAGCTGTATCGAACGATGTTTTGTGTTCAAGGACAAGGAGATAATCAAGTCCAAGTCCAAGGAGCACTAGCAGTAGCAGCAGCAACACCAAACTACAAGCGAGCACTCCGCATCGCCAAGGTCGAGCTGGCCTTCGTCAACGACTTCTTCTTCAGCCGCCACGCGCTCATGTTCGCCACCGGCTTCCCGTTCCTGCGGCTCCTCCTGTCCACCCTCCTCCTCGGAGCCATCTCCTACATGGCCGTCGCCATCCACCGTTTCTCCAGGACCGCCACCGAGGACGAGCTCGGGAGGGTGCGCGTCCACCACGGGGTGTTCTTCACGTGGATCCTCCTCACGCTGCTCGGCGTCAAGGAGATGGTCGAGATCGCCAGCTACGTGTTCTCGGACTGGACCAAGGTGATGCTGCTGTGCAAGTACGTTCGGCAGCCGTGGTGGCTACGGGGCCCGGCGATGGCGAAGCTGGTGAGGCTGCTCTGCAGGTGCTCCCTCGTCAGAAGATGGGATGGGAAGATCGGGCAGTACAACCTCGTCTTCGCTAAAGGTCTACCAGACCTATTTCGGCTGGCTGATTTCACTGAAGATATGCAGGAAGCGATATTTACCTCTTTTGGGAAACTGAGGAACGACGTCCAATCTGGCAAGCAACCATTGGATGCGGATACGCCTTCTTACGTGGATAGGGCGTTACTACATATACCAACGGAAGGGGGGAAGGGTGCCCTTAAGAAAGCCATCAGCAAGGTACTAAAAGACTTAAAAGGAGATGTTCGCACTATACTGCTTTGGCACATCGCTACCTGTTACTGCGACTGCTACCTTGCTCACAGAAGAGAAATTGGTGTGAAGCCACGGTACCTTTCGAGCTTGAGGATTCGGTTTTGGCCTTTCAGGATTCGGTTCTTATTAGAATTCGGCATATGGGCAGGCCCATCGATCCAATGCTCGAAACGTGAATCACTCGGAAAGGCCAAGAAGCATTACATGACTGCTGTTACGCTGTCCCAGTACTGCGCACATCTGGTCAGGATGCCCTATCCTCTGATTCCAGGTAACGACATCGTCATCGATGCGGTGTTCAAACAAGTGCTCGGTGAAACCTGCCAGGCTCTCCATGGATGCGTTTACATCTCCGAAATATTTCCGAGGCTCGCGGAAATGGGCAGAAGCTGTCCAGGCAACGACGAGAGAACCTTGCTGCAGATGGGGTCACAGATTGGTCAGATGCTGATAGAAATCGCCGGTGACAATAACACGGCGGATGAATTTGTTTGGAAGTTCTTGGAGGAGCTCTGGGCGGGGTTCGTGCTGCACTTGGCCGAGTCCACGGTAGCTTCCAAGCACAAGATATACCTTAGCAGGGGAGGGGATCTCATGACGCATCTCTGGGCGCTGCTCTGCCATGCAGGGCGCAAGGGGAGGACCGAGCACGGCGAGATGGGACATGGGGAAGCATCGTACTACGAGGTTGATAGGGCAGGCTATGACATGAATACTTGA
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| Protein seq | MAKVISVFVSNLHLSPAGVQFLAGLTTFLMVLRFVLDYNRHRSISQSMRNFLLMLDGITYSLLHYSLGVMQRPSLKNSYYQVWAVLLVTLRYSVKHGRPAGVALKQTPLVDLMSSFWAANILRSHAPRLLKVPVWLLWSVNSARIIHGFVSSEHATAEHRENVRLVTEYMRRPKTTPASEFDPVTMAGYEYLVLGEAKQRKKVQPPDYRLELDQTKLEKLITVDKIWKWSRDNDDDQQAKRVSELLNQRDGELKDLCLSFALYKLLRRKFFTLPIHEEDLPETKRLVFEGILDSPASNSKPEPWLGRLKKLYRTMFCVQGQGDNQVQVQGALAVAAATPNYKRALRIAKVELAFVNDFFFSRHALMFATGFPFLRLLLSTLLLGAISYMAVAIHRFSRTATEDELGRVRVHHGVFFTWILLTLLGVKEMVEIASYVFSDWTKVMLLCKYVRQPWWLRGPAMAKLVRLLCRCSLVRRWDGKIGQYNLVFAKGLPDLFRLADFTEDMQEAIFTSFGKLRNDVQSGKQPLDADTPSYVDRALLHIPTEGGKGALKKAISKVLKDLKGDVRTILLWHIATCYCDCYLAHRREIGVKPRYLSSLRIRFWPFRIRFLLEFGIWAGPSIQCSKRESLGKAKKHYMTAVTLSQYCAHLVRMPYPLIPGNDIVIDAVFKQVLGETCQALHGCVYISEIFPRLAEMGRSCPGNDERTLLQMGSQIGQMLIEIAGDNNTADEFVWKFLEELWAGFVLHLAESTVASKHKIYLSRGGDLMTHLWALLCHAGRKGRTEHGEMGHGEASYYEVDRAGYDMNT |
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| Function | - | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsZS97_10G0292200 | OsZS97_10T0292200.1 | Chr10 | 18659289 | 18662091 | + | makerRMon | ||
| CDS seq | ATGGCGAAAGTGATCAGCGTGTTCGTGAGCAACCTCCACCTAAGCCCAGCGGGCGTCCAGTTCCTTGCCGGCCTCACCACCTTCCTCATGGTGCTCCGTTTCGTGCTGGATTACAACCGCCATCGCTCCATCAGCCAGTCCATGAGGAATTTCCTGCTGATGCTAGACGGGATCACCTACTCGCTCCTGCACTACAGCCTCGGGGTGATGCAGCGGCCGTCGCTGAAGAACAGCTACTACCAGGTGTGGGCCGTGCTGCTCGTCACGCTCCGCTACAGCGTGAAGCACGGCCGCCCCGCCGGCGTGGCTCTCAAGCAGACGCCATTGGTGGACCTCATGTCCTCCTTCTGGGCTGCCAACATCCTCCGCTCGCACGCCCCGCGGCTGCTCAAGGTCCCCGTCTGGCTTCTCTGGTCCGTCAACTCCGCCAGGATCATCCATGGCTTCGTCTCCTCGGAGCACGCCACCGCTGAACACCGGGAGAACGTCCGCCTCGTGACGGAGTACATGCGCCGCCCCAAGACGACGCCGGCGTCCGAGTTTGACCCCGTGACGATGGCTGGCTACGAGTACTTGGTGCTGGGCGAAGCCAAACAGAGGAAGAAGGTGCAACCCCCGGATTACCGTCTCGAGCTGGATCAAACCAAGCTGGAAAAGCTCATCACCGTCGACAAGATTTGGAAGTGGTCGAGGGACAACGACGACGACCAGCAAGCGAAGCGCGTGTCGGAGCTCCTCAACCAGCGTGACGGCGAGCTCAAGGACCTCTGCCTCTCGTTCGCTCTCTACAAGCTGCTGCGCCGGAAGTTCTTCACTCTCCCTATCCACGAGGAGGATCTGCCAGAGACGAAGAGGCTCGTCTTCGAGGGAATCCTAGATTCTCCTGCCAGCAACAGCAAGCCGGAACCTTGGCTTGGACGACTCAAGAAGCTGTATCGAACGATGTTTTGTGTTCAAGGACAAGGAGATAATCAAGTCCAAGTCCAAGGAGCACTAGCAGTAGCAGCAGCAACACCAAACTACAAGCGAGCACTCCGCATCGCCAAGGTCGAGCTGGCCTTCGTCAACGACTTCTTCTTCAGCCGCCACGCGCTCATGTTCGCCACCGGCTTCCCGTTCCTGCGGCTCCTCCTGTCCACCCTCCTCCTCGGAGCCATCTCCTACATGGCCGTCGCCATCCACCGTTTCTCCAGGACCGCCACCGAGGACGAGCTCGGGAGGGTGCGCGTCCACCACGGGGTGTTCTTCACGTGGATCCTCCTCACGCTGCTCGGCGTCAAGGAGATGGTCGAGATCGCCAGCTACGTGTTCTCGGACTGGACCAAGGTGATGCTGCTGTGCAAGTACGTTCGGCAGCCGTGGTGGCTACGGGGCCCGGCGATGGCGAAGCTGGTGAGGCTGCTCTGCAGGTGCTCCCTCGTCAGAAGATGGGATGGGAAGATCGGGCAGTACAACCTCGTCTTCGCTAAAGGTCTACCAGACCTATTTCGGCTGGCTGATTTCACTGAAGATATGCAGGAAGCGATATTTACCTCTTTTGGGAAACTGAGGAACGACGTCCAATCTGGCAAGCAACCATTGGATGCGGATACGCCTTCTTACGTGGATAGGGCGTTACTACATATACCAACGGAAGGGGGGAAGGGTGCCCTTAAGAAAGCCATCAGCAAGGTACTAAAAGACTTAAAAGGAGATGTTCGCACTATACTGCTTTGGCACATCGCTACCTGTTACTGCGACTGCTACCTTGCTCACAGAAGAGAAATTGGTGTGAAGCCACGGTACCTTTCGAGCTTGAGGATTCGGTTTTGGCCTTTCAGGATTCGGTTCTTATTAGAATTCGGCATATGGGCAGGCCCATCGATCCAATGCTCGAAACGTGAATCACTCGGAAAGGCCAAGAAGCATTACATGACTGCTGTTACGCTGTCCCAGTACTGCGCACATCTGGTCAGGATGCCCTATCCTCTGATTCCAGGTAACGACATCGTCATCGATGCGGTGTTCAAACAAGTGCTCGGTGAAACCTGCCAGGCTCTCCATGGATGCGTTTACATCTCCGAAATATTTCCGAGGCTCGCGGAAATGGGCAGAAGCTGTCCAGGCAACGACGAGAGAACCTTGCTGCAGATGGGGTCACAGATTGGTCAGATGCTGATAGAAATCGCCGGTGACAATAACACGGCGGATGAATTTGTTTGGAAGTTCTTGGAGGAGCTCTGGGCGGGGTTCGTGCTGCACTTGGCCGAGTCCACGGTAGCTTCCAAGCACAAGATATACCTTAGCAGGGGAGGGGATCTCATGACGCATCTCTGGGCGCTGCTCTGCCATGCAGGGCGCAAGGGGAGGACCGAGCACGGCGAGATGGGACATGGGGAAGCATCGTACTACGAGGTTGATAGGGCAGGCTATGACATGAATACTTGA
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| Protein seq | MAKVISVFVSNLHLSPAGVQFLAGLTTFLMVLRFVLDYNRHRSISQSMRNFLLMLDGITYSLLHYSLGVMQRPSLKNSYYQVWAVLLVTLRYSVKHGRPAGVALKQTPLVDLMSSFWAANILRSHAPRLLKVPVWLLWSVNSARIIHGFVSSEHATAEHRENVRLVTEYMRRPKTTPASEFDPVTMAGYEYLVLGEAKQRKKVQPPDYRLELDQTKLEKLITVDKIWKWSRDNDDDQQAKRVSELLNQRDGELKDLCLSFALYKLLRRKFFTLPIHEEDLPETKRLVFEGILDSPASNSKPEPWLGRLKKLYRTMFCVQGQGDNQVQVQGALAVAAATPNYKRALRIAKVELAFVNDFFFSRHALMFATGFPFLRLLLSTLLLGAISYMAVAIHRFSRTATEDELGRVRVHHGVFFTWILLTLLGVKEMVEIASYVFSDWTKVMLLCKYVRQPWWLRGPAMAKLVRLLCRCSLVRRWDGKIGQYNLVFAKGLPDLFRLADFTEDMQEAIFTSFGKLRNDVQSGKQPLDADTPSYVDRALLHIPTEGGKGALKKAISKVLKDLKGDVRTILLWHIATCYCDCYLAHRREIGVKPRYLSSLRIRFWPFRIRFLLEFGIWAGPSIQCSKRESLGKAKKHYMTAVTLSQYCAHLVRMPYPLIPGNDIVIDAVFKQVLGETCQALHGCVYISEIFPRLAEMGRSCPGNDERTLLQMGSQIGQMLIEIAGDNNTADEFVWKFLEELWAGFVLHLAESTVASKHKIYLSRGGDLMTHLWALLCHAGRKGRTEHGEMGHGEASYYEVDRAGYDMNT
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0061255 | 0.1113705 | 0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os10g31250 | RBH | 0.0 | 0.000000 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | NA | NA | NA | NA | NA |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_10g0012740 | RBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_10g0012950 | RBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_10g0012690 | RBH | 0.0 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_10g0012920 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_10g0012780 | RBH | 0.0 | 2.845569 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_10G0273000 | RBH | 0.0155935 | 0.4110765 | 0 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_10g0012800 | RBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_10G0292000 | RBH | 0.0807005 | 0.188521 | 0.2243595 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_10g0012530 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_10g0012480 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_10g0012830 | RBH | 0.0 | 2.637536 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_10g0012540 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_10g0013040 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_10G012790 | RBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_10g0012740 | RBH | 0.0 | 0.0 | 0.0 |
