Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsZS97_10G0174300 | OGI:10002700 | 16/16 | Zhenshan 97 | ZS97RS3 | HZAU | Chr10:11216096-11219427 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | TCAGCACAGCTCACGAGCAAACCAACTAGACCCTAAGAGAAGCAACAAAAACCTAGACATCAGACCGGCCAAACAGACCACAAAAGTCTAAATATCTATAGGAAGATTACAGGGCTTCAGCCGATTGAGTTTTTTCATCAGCAACTCGCACCACCTCTTCATAGTTACTTGATCATCTTCCTTTAGCAGAATGCACTAGCGTTGTACAAAAGATGAAGATTTGTAAGCAACCTGCAAAGGAGACTTCACCAGAATATTTGAAAAAACCCAATCATTCCTCGTTAACCAAATAGCCCAGCATACGCTTGCAATAAGCATAACCTAAACCTTCAGAACTTTATGCCCCTTCATCAAGCCCAAACAATTAATAAAATTAATAGGAATCTGGGCTAATCCCAAGGCATCTCTCACCACACACTAGGTAAAGGCAGCTAAAGGACAAAGAATAGGACATGGTTTGTGGTTTCAGTCTTGCCCACAAAGTTTACAAAATTCATTCCCTCCCTTCCACTGTCTTTTAATCAATTGGGAAGCACAAGTAACCTTCCTCGATCTGTCATATAGATGAAATGTTTAATTTTCAGTGGAATTTTACTCTTCCAGACAGCCATCATCCCAAGATCTCTAACCCCCCCAAAAGTTAATTCTCTATACATGGACTTGGTAGTAAACCCATTTTTACTGTTATGTGGCCAAATCATTAAATCATTGCCCTCCTCCAGAACAACTCCCTGAACCAGCTGAGTGAGCTCTGCTAGCTCTGCCTCCCCATTAGCATCCATGTTTCTCCTAAAGTCCAACCTCCATCCCCCATCTTCAAACAAATCCTTAACAGTAGCAGTTTGGTGGTAACTGATAGCGAAAAGATGTGGGAAAAGAATTTTTAGACTACACTGGCAGCACCAAACATCAGTCCAAAAGTAAGTGCTTTCCCCATTATGAACCTCTTTTAGCACTAATCTTTCCAAAACCTTCTTACATTCATGCAAACCCTTCCAGAATTGAGATCCTACTTGAGGAGAGCTTTGAAAAAACCCACCCAGATAAAGATATTTCTTCCTTAATACCTCCAGACACATATCACTATCCCCTCTTTCTAGCCTCACAACCCATTTGCTATGTAGGCACAAGTTCATAATCCTAGTATCCATAAAACCCAAACCTCCAAAATCCTTAGGTCTTATCAAACCCTCCCATTTCATCATGTGGTACTATTTCTTCTCTCCCAAACCTTGCTAGTAAAAGTTCCCTCTCAGGGAGTCCATCTTCTTATGAAACTCCCCAGGCAGATAGTAGAAACCCATCGCATACATTGGAGCACTCGACATACAGGAGTTGATTTTGATCTTTCTCCCACCATAAGTAAGATATCCACTTTTCCAAGTTTGTAATCTCTTTTCCACTTTCTGGATTATCAATCTAAAATCTTTCATCCCAACTTTTTCACAATGCATTGGCAACCCCAAATAGGTAAATGGCATTGTTCCTACTTTACAATTAAGCATATTGGCTATCCTTATTTCTTCCGCTTTATCCACTCCCAACACATATACTTCACTTTTTTGGTAATTTATTTTCATACCAGACATCTCTTCAAAACAGAACAAAAGGAACTTTAAAACCCTCACATTGTCATCCCCCACCTTAATGAAGAGAATGGTGTCATCTGCATATTGCAAGTGGGACAAACCCCCAGGAACTAGGTCAGGAACTAATCCCTTCAAAATCCCCCTTTCCTTTGCCTTTTCTAGAATGACAGCTAAAGCATCCCCAACTAAATTAAACAACAGAGGAGATAGAGGATCTCCCTGCCTTAAACCCCTAAAAGTTCTGAAAAAAGGGCCCTAATCACCATAGATGTTAATGCTGACTTTGGCACCCTCATTGAACTTCTTCACCCAACTGATAAGTTCAGGACTGAAATTGTTTTTCTTCATGACCTCATATAAGAACCCCCAATTTACTCTGTCATAAGCCTTTTCGAAGTCGATTTTGAAAATAACTCCTTTTTCACCCTTTCTCTTCAGCTCATGCAGAGTTTCATGGAGAATCACACACCCCTCTAAAATGTTTCTTCTAGGAATAAAAGCAGTTTGGGTCCAGCTAATAATTTTATCAGCTACCCTAGCTACTCTCTCATTGATGGTCTTGGTCAAAATCTTTATGATGACATTCTGAACACAAATAGGCCTATATTGTTTTATTGTGTTTGCATCCAAAACCTTAGGCAGGAGAGTGACCACCCCATATTTCAACCTGTCAGTATCAAGAGACCCCTGATGCAGTTCATCAAGCATTTCTTTGACTAAAACTCTAAATTTTGGCCACATGTTCTTGTAGAAACCCACAGAGAACCCATCTGGGCCAGGTGAAGTGTTTGATTTCATCCTTTTTATTACCTCATCAATCTCCTGGAATGTAAAAGGCTTGACCAAATCTAATTTATCCTCCTCAGAGAGTCTCAGATTTGTCCCCCAAACATCATCACTAAGATCTAAGATGCACATTTCTACACCCTTCCCTTCCAAAAAGTTTCTTGTAATAATCATAAATGTGGGTCTGAATTTGGGTAAAATCAGAAATTGTGCTCTCCCCATCCTGTAGAGAAAAAATATGCCTCTTGCGTTTTCTGCCATTCGCCACCCCATGAAAAAACAAGGTATTAGCATCCCCTGGAGAATCCACTTTTCTCCACATCTCAATTGCCACCAGATTTCTTCCAGGAAATAAATTTTCTCCACTTCCTTCTCTAATTCATATCTCTCTGACCATTCATGATAAAAAAGCTCCCTATCTTCAGCCTTTGCATCAATCTCCCTAAGTTTATGTTCAATTAGTTTCCTGTGTTTCTTTGTGTCACTAGTCTTATTGGCTCCCCAGCCTCTTAACCATCTTCTAATACAAGGCATCAATAGGTGCCAATAGTCCAAAACTCCCTTTTGCAACCTCACTGGCCAAACCCTCATTAACTGTTCCCTAAAACCTGGATGTTGAAACCATCTCAATTCAAATCTGAAAGATTTAGTTCTCATCCTATCTTCCTCTCTTGTGTCCAGTAAGATAGGATAGTGATCAAAATCCACTCTTAACAAAGAACACACCAAAGTCAAAGGATTCTTTTGTTTCCATGAGTTTGATGCAAAAACCCTATCCAGTACCCCCATAACAGGATAGAGTTGTTTATTAGTCCAAGTAAACTTGCAGCCAGCCCTGTAGAACTCATGTAGGCTATGATCATTGACAAACTTATTGAACATATCCATTCTTCTCACATCCACAACCCCATTGGACTTATCTGAGCTATATCTGTACATGTTGAAATCTCCCCCCAT
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| CDS seq | ATGGGGGGAGATTTCAACATGTACAGATATAGCTCAGATAAGTCCAATGGGGTTGTGGATGTGAGAAGAATGGATATGTTCAATAAGTTTGTCAATGATCATAGCCTACATGAGTTCTACAGGGCTGGCTGCAAGTTTACTTGGACTAATAAACAACTCTATCCTGTTATGGGGGTACTGGATAGGGTTTTTGCATCAAACTCATGGAAACAAAAGAATCCTTTGACTTTGGTGTGTTCTTTGTTAAGAGTGGATTTTGATCACTATCCTATCTTACTGGACACAAGAGAGGAAGATAGGATGAGAACTAAATCTTTCAGATTTGAATTGAGATGGTTTCAACATCCAGGTTTTAGGGAACAGTTAATGAGGGTTTGGCCAGTGAGGTTGCAAAAGGGAGTTTTGGACTATTGGCACCTATTGATGCCTTGTATTAGAAGATGGTTAAGAGGCTGGGGAGCCAATAAGACTAGTGACACAAAGAAACACAGGAAACTAATTGAACATAAACTTAGGGAGATTGATGCAAAGGCTGAAGATAGGGAGCTTTTTTATCATGAATGGTCAGAGAGATATGAATTAGAGAAGGAAGTGGAGAAAATTTATTTCCTGGAAGAAATCTGGTGGCAATTGAGATGTGGAGAAAAGTGGATTCTCCAGGGGATGCTAATACCTTGTTTTTTCATGGGGTGGCGAATGGCAGAAAACGCAAGAGGCATATTTTTTCTCTACAGGATGGGGAGAGCACAATTTCTGATTTTACCCAAATTCAGACCCACATTTATGATTATTACAAGAAACTTTTTGGAAGGGAAGGGTGTAGAAATGTGCATCTTAGATCTTAGTGATGATGTTTGGGGGACAAATCTGAGACTCTCTGAGGAGGATAAATTAGATTTGGTCAAGCCTTTTACATTCCAGGAGATTGATGAGGTAATAAAAAGGATGAAATCAAACACTTCACCTGGCCCAGATGGGTTCTCTGTGGGTTTCTACAAGAACATGTGGCCAAAATTTAGAGTTTTAGTCAAAGAAATGCTTGATGAACTGCATCAGGGGTCTCTTGATACTGACAGGTTGAAATATGGGGTGGTCACTCTCCTGCCTAAGGTTTTGGATGCAAACACAATAAAACAATATAGGCCTATTTGTGTTCAGAATGTCATCATAAAGATTTTGACCAAGACCATCAATGAGAGAGTAGCTAGGGTAGCTGATAAAATTATTAGCTGGACCCAAACTGCTTTTATTCCTAGAAGAAACATTTTAGAGGGGTGTGTGATTCTCCATGAAACTCTGCATGAGCTGAAGAGAAAGGGTGAAAAAGGAGTTATTTTCAAAATCGACTTCGAAAAGGCTTATGACAGAGTAAATTGGGGGTTCTTATATGAGGTCATGAAGAAAAACAATTTCAGTCCTGAACTTATCAGTTGGGTGAAGAAGTTCAATGAGGGTGCCAAAGTCAGCATTAACATCTATGTTGGGGATGCTTTAGCTGTCATTCTAGAAAAGGCAAAGGAAAGGGGGATTTTGAAGGGATTAGTTCCTGACCTAGTTCCTGGGGGTTTGTCCCACTTGCAATATGCAGATGACACCATTCTCTTCATTAAGGTGGGGGATGACAATGATTTGTTTGAAGATGGGGGATGGAGGTTGGACTTTAGGAGAAACATGGATGCTAATGGGGAGGCAGAGCTAGCAGAGCTCACTCAGCTGGTTCAGGGAGTTGTTCTGGAGGAGGGCAATGATTTAATGATTTGGCCACATAACAGGTCTAGTTGGTTTGCTCGTGAGCTGTGCTGA
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| Protein seq | MGGDFNMYRYSSDKSNGVVDVRRMDMFNKFVNDHSLHEFYRAGCKFTWTNKQLYPVMGVLDRVFASNSWKQKNPLTLVCSLLRVDFDHYPILLDTREEDRMRTKSFRFELRWFQHPGFREQLMRVWPVRLQKGVLDYWHLLMPCIRRWLRGWGANKTSDTKKHRKLIEHKLREIDAKAEDRELFYHEWSERYELEKEVEKIYFLEEIWWQLRCGEKWILQGMLIPCFFMGWRMAENARGIFFLYRMGRAQFLILPKFRPTFMIITRNFLEGKGVEMCILDLSDDVWGTNLRLSEEDKLDLVKPFTFQEIDEVIKRMKSNTSPGPDGFSVGFYKNMWPKFRVLVKEMLDELHQGSLDTDRLKYGVVTLLPKVLDANTIKQYRPICVQNVIIKILTKTINERVARVADKIISWTQTAFIPRRNILEGCVILHETLHELKRKGEKGVIFKIDFEKAYDRVNWGFLYEVMKKNNFSPELISWVKKFNEGAKVSINIYVGDALAVILEKAKERGILKGLVPDLVPGGLSHLQYADDTILFIKVGDDNDLFEDGGWRLDFRRNMDANGEAELAELTQLVQGVVLEEGNDLMIWPHNRSSWFARELC |
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| Function | Transposon TX1 uncharacterized 149 kDa protein [UniProtKB/Swiss-Prot:P14381] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsZS97_10G0174300 | OsZS97_10T0174300.1 | Chr10 | 11216096 | 11219427 | - | makerRMon | ||
| CDS seq | ATGGGGGGAGATTTCAACATGTACAGATATAGCTCAGATAAGTCCAATGGGGTTGTGGATGTGAGAAGAATGGATATGTTCAATAAGTTTGTCAATGATCATAGCCTACATGAGTTCTACAGGGCTGGCTGCAAGTTTACTTGGACTAATAAACAACTCTATCCTGTTATGGGGGTACTGGATAGGGTTTTTGCATCAAACTCATGGAAACAAAAGAATCCTTTGACTTTGGTGTGTTCTTTGTTAAGAGTGGATTTTGATCACTATCCTATCTTACTGGACACAAGAGAGGAAGATAGGATGAGAACTAAATCTTTCAGATTTGAATTGAGATGGTTTCAACATCCAGGTTTTAGGGAACAGTTAATGAGGGTTTGGCCAGTGAGGTTGCAAAAGGGAGTTTTGGACTATTGGCACCTATTGATGCCTTGTATTAGAAGATGGTTAAGAGGCTGGGGAGCCAATAAGACTAGTGACACAAAGAAACACAGGAAACTAATTGAACATAAACTTAGGGAGATTGATGCAAAGGCTGAAGATAGGGAGCTTTTTTATCATGAATGGTCAGAGAGATATGAATTAGAGAAGGAAGTGGAGAAAATTTATTTCCTGGAAGAAATCTGGTGGCAATTGAGATGTGGAGAAAAGTGGATTCTCCAGGGGATGCTAATACCTTGTTTTTTCATGGGGTGGCGAATGGCAGAAAACGCAAGAGGCATATTTTTTCTCTACAGGATGGGGAGAGCACAATTTCTGATTTTACCCAAATTCAGACCCACATTTATGATTATTACAAGAAACTTTTTGGAAGGGAAGGGTGTAGAAATGTGCATCTTAGATCTTAGTGATGATGTTTGGGGGACAAATCTGAGACTCTCTGAGGAGGATAAATTAGATTTGGTCAAGCCTTTTACATTCCAGGAGATTGATGAGGTAATAAAAAGGATGAAATCAAACACTTCACCTGGCCCAGATGGGTTCTCTGTGGGTTTCTACAAGAACATGTGGCCAAAATTTAGAGTTTTAGTCAAAGAAATGCTTGATGAACTGCATCAGGGGTCTCTTGATACTGACAGGTTGAAATATGGGGTGGTCACTCTCCTGCCTAAGGTTTTGGATGCAAACACAATAAAACAATATAGGCCTATTTGTGTTCAGAATGTCATCATAAAGATTTTGACCAAGACCATCAATGAGAGAGTAGCTAGGGTAGCTGATAAAATTATTAGCTGGACCCAAACTGCTTTTATTCCTAGAAGAAACATTTTAGAGGGGTGTGTGATTCTCCATGAAACTCTGCATGAGCTGAAGAGAAAGGGTGAAAAAGGAGTTATTTTCAAAATCGACTTCGAAAAGGCTTATGACAGAGTAAATTGGGGGTTCTTATATGAGGTCATGAAGAAAAACAATTTCAGTCCTGAACTTATCAGTTGGGTGAAGAAGTTCAATGAGGGTGCCAAAGTCAGCATTAACATCTATGTTGGGGATGCTTTAGCTGTCATTCTAGAAAAGGCAAAGGAAAGGGGGATTTTGAAGGGATTAGTTCCTGACCTAGTTCCTGGGGGTTTGTCCCACTTGCAATATGCAGATGACACCATTCTCTTCATTAAGGTGGGGGATGACAATGATTTGTTTGAAGATGGGGGATGGAGGTTGGACTTTAGGAGAAACATGGATGCTAATGGGGAGGCAGAGCTAGCAGAGCTCACTCAGCTGGTTCAGGGAGTTGTTCTGGAGGAGGGCAATGATTTAATGATTTGGCCACATAACAGGTCTAGTTGGTTTGCTCGTGAGCTGTGCTGA
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| Protein seq | MGGDFNMYRYSSDKSNGVVDVRRMDMFNKFVNDHSLHEFYRAGCKFTWTNKQLYPVMGVLDRVFASNSWKQKNPLTLVCSLLRVDFDHYPILLDTREEDRMRTKSFRFELRWFQHPGFREQLMRVWPVRLQKGVLDYWHLLMPCIRRWLRGWGANKTSDTKKHRKLIEHKLREIDAKAEDRELFYHEWSERYELEKEVEKIYFLEEIWWQLRCGEKWILQGMLIPCFFMGWRMAENARGIFFLYRMGRAQFLILPKFRPTFMIITRNFLEGKGVEMCILDLSDDVWGTNLRLSEEDKLDLVKPFTFQEIDEVIKRMKSNTSPGPDGFSVGFYKNMWPKFRVLVKEMLDELHQGSLDTDRLKYGVVTLLPKVLDANTIKQYRPICVQNVIIKILTKTINERVARVADKIISWTQTAFIPRRNILEGCVILHETLHELKRKGEKGVIFKIDFEKAYDRVNWGFLYEVMKKNNFSPELISWVKKFNEGAKVSINIYVGDALAVILEKAKERGILKGLVPDLVPGGLSHLQYADDTILFIKVGDDNDLFEDGGWRLDFRRNMDANGEAELAELTQLVQGVVLEEGNDLMIWPHNRSSWFARELC
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0 | 0 | 0.0337915 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_10g0351414 | RBH | 0.000000 | 0.0 | 0.431616 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os10g18060 | SBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os10g0351414 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_10g0006460 | SBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | NA | NA | NA | NA | NA |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_04G0274900 | SBH | 0 | 0 | 0.0376145 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_10g0006680 | SBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_10g0006340 | SBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_10g0006760 | SBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_10G006580 | SBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_10g0006690 | SBH | 0.0 | 0.0 | 0.0 |
