Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsZS97_10G0053300 | OGI:10010120 | 14/16 | Zhenshan 97 | ZS97RS3 | HZAU | Chr10:3250007-3252215 | ||||||||
| Gene Symbol | OsFbox531, Os_F0024, OsFbox538, Os_F0470 | ||||||||||
| DNA seq | CTACGGAGCATAAAGATAATCTGATAATATCTTCGCATAAAGCAAATATATGCTCAATGGAGTATTAGCTGTAATCTCAAACATAGAGCAACTGACACATTGGCCTTTTACGACTGAAACATGCGTGATCTAACATAAGTTAGAATAGCTAATAATACTTATATGGTAGTATGTGCTTAATACGTTAGACATTGGTGAAAGCAGTGCAGATGCATAGCTGATCCTTGAACACCTCTGCAAACCAAAGATCCTACAGCCGTCCACTTCCATGAACTGCACCAGCATCTTCACCTTCACCACCTCCACCTGCCATTACTGGAGAGTTAGGCCTAATTATGGAAGACCATCAGTCCATCACAGAAACCAGCAAAACTGGGATATGTAACAACATTAACGCACAACACATATATGGCAATTCGAAATTCTAGCAATTTGACAACTACTTGTGGGTAACCCCAAAGGAAAGAAAGGTTCTTTCACTAGAATCCATCTTTCTGAAGGTCACTAGAATCAAGAATGCATGTTAAAGCTCTCTGTAATTAGTTCAGTGTAGTGCATGATGAAATGAATATTCGTGTCCATCCTTTAACGTAACCCACAAATAAAAGCAATCAGAAAAGACTACACATGAAAGGTTACTGGATACAATATAATCCAAATGAATACCCCCCTCCATCCCAAAATATATGATTGAACTAACCAACATTATATAAAAAGAAACAGAGGGAGTATTATTCATGTAATCTTTACCAACAAAGCTCATGGTGTGAATTGCAGATGCACAAGAACAGTCACAGGAAAAATAAAAGAAATATGAGATTGTCGTGCATGGTTGCTACAATGCTACCCCCACATCACAGCCTCTATTTTTGCAGGCATGTTCGACGTGAAGAAAGCTAGTTAATTCTGAAAAGACAAGAGCATGAACTAGTTTGGCCAATTTATGATGTCATAAATTCGTCAGCTTTCTTACAGAAATGAGTAACTTCGGAGCTTAAAATAGCTAAGCGAATCATTTGTTATACTTTAAAAACTTTCAAACTTTATATAGTAGATGTTGTTGTATCAGTATTATAGAGTAAACATGCTATAGTTCTATATGGGTGAGGGTGACCCCAGAATTTTCCTTTTTAAATGGAAGGTAAAGCATAGCTCCTTCTACAATATGCAACACTGTAGTTACATACGGATGACTCCAAAAATATGTGATCACCATTCACATCCACCAGTACAATCTTTAGCTCATCCCCTGATAGCTTATTACCAGATTTCAATGATATATTCAAGAGAAATCAGAAGCTATATTCTTACCCATAAAAGGCACATATATTCAATTATGGTAGAAAATGGATACCAATGCAAGCCCTATGTTCTTACTAACTCAAACCATACGGGAATTGGATATTCACAGTAACATTTTAACAATATGCTAGTTGAGGTGCACCTCTGATAAGCCAATTTCTGCGTACTACCCATTTTACATCCTCTTGAATCCATGAATTGCAAGAAATATGATAAGTCACTTCAACAAAGTAAACTATCAACTTGATACTGCTAACATCCATTTCATATGTGCATGTCTGCATTCCTATCCACAAAGCACAAACTAGAAAAGCAATCTATAACTGCAACTAAACTCAACCAGAACAGACAGGGATTTGAAGTCATTTGTGCACTTCATCTTCAGATACTACGAAAATTACACATTTAGAGGCAAATCAAATTCAAAATGAGAGCAAGTAAACACATAAAAAAAAACATTGCATGTTATACCTGCAACATAGACGCTTGAATAGGGATAAACAAAGTCCACCACTCTGGAAGCAGCCACCTTCTTCATCAGCATCTCATCTTCAAGATGGAGCATGAAGATCCCCTCAATTGTCCATATGAACGCAGAGATGCCACCTTCGTCAACCCCGAGCAGCCGGACAGGCGGCACCAGAATCACCCGCCCACCTGCGCATGGCAATGGCATTGGAGCGAACACGTCGAGGTCAATGCTCTTGAGAAGCACCCAGCTGCTGGTGCTTGCGACGCCATCGGCGCCGCCAGCCTCCCGCGCCCACAGCTGCAGGCTGAACACGTCCATCACGGCGAGGCCGAGTGCGCCGTCCGGCGAGGCCATCAGCTGGATGCTGCTCCTCCCGTACAGAGCCAGAGCGTCGGGCGGCGGCGGCTCGACCACGGCGAGGGTCTCCTTGCCCAT
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| CDS seq | ATGGGCAAGGAGACCCTCGCCGTGGTCGAGCCGCCGCCGCCCGACGCTCTGGCTCTGTACGGGAGGAGCAGCATCCAGCTGATGGCCTCGCCGGACGGCGCACTCGGCCTCGCCGTGATGGACGTGTTCAGCCTGCAGCTGTGGGCGCGGGAGGCTGGCGGCGCCGATGGCGTCGCAAGCACCAGCAGCTGGGTGCTTCTCAAGAGCATTGACCTCGACGTGTTCGCTCCAATGCCATTGCCATGCGCAGGTGGGCGGGTGATTCTGGTGCCGCCTGTCCGGCTGCTCGGGGTTGACGAAGGTGGCATCTCTGCGTTCATATGGACAATTGAGGGGATCTTCATGCTCCATCTTGAAGATGAGATGCTGATGAAGAAGGTGGCTGCTTCCAGAGTGGTGGACTTTGTTTATCCCTATTCAAGCGTCTATGTTGCAGTCGTAAAAGGCCAATGTGTCAGTTGCTCTATGTTTGAGATTACAGCTAATACTCCATTGAGCATATATTTGCTTTATGCGAAGATATTATCAGATTATCTTTATGCTCCGTAG
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| Protein seq | MGKETLAVVEPPPPDALALYGRSSIQLMASPDGALGLAVMDVFSLQLWAREAGGADGVASTSSWVLLKSIDLDVFAPMPLPCAGGRVILVPPVRLLGVDEGGISAFIWTIEGIFMLHLEDEMLMKKVAASRVVDFVYPYSSVYVAVVKGQCVSCSMFEITANTPLSIYLLYAKILSDYLYAP |
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| Function | - | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsZS97_10G0053300 | OsZS97_10T0053300.1 | Chr10 | 3250007 | 3252215 | - | makerRMon | ||
| CDS seq | ATGGGCAAGGAGACCCTCGCCGTGGTCGAGCCGCCGCCGCCCGACGCTCTGGCTCTGTACGGGAGGAGCAGCATCCAGCTGATGGCCTCGCCGGACGGCGCACTCGGCCTCGCCGTGATGGACGTGTTCAGCCTGCAGCTGTGGGCGCGGGAGGCTGGCGGCGCCGATGGCGTCGCAAGCACCAGCAGCTGGGTGCTTCTCAAGAGCATTGACCTCGACGTGTTCGCTCCAATGCCATTGCCATGCGCAGGTGGGCGGGTGATTCTGGTGCCGCCTGTCCGGCTGCTCGGGGTTGACGAAGGTGGCATCTCTGCGTTCATATGGACAATTGAGGGGATCTTCATGCTCCATCTTGAAGATGAGATGCTGATGAAGAAGGTGGCTGCTTCCAGAGTGGTGGACTTTGTTTATCCCTATTCAAGCGTCTATGTTGCAGTCGTAAAAGGCCAATGTGTCAGTTGCTCTATGTTTGAGATTACAGCTAATACTCCATTGAGCATATATTTGCTTTATGCGAAGATATTATCAGATTATCTTTATGCTCCGTAG
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| Protein seq | MGKETLAVVEPPPPDALALYGRSSIQLMASPDGALGLAVMDVFSLQLWAREAGGADGVASTSSWVLLKSIDLDVFAPMPLPCAGGRVILVPPVRLLGVDEGGISAFIWTIEGIFMLHLEDEMLMKKVAASRVVDFVYPYSSVYVAVVKGQCVSCSMFEITANTPLSIYLLYAKILSDYLYAP |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0312745 | 0 | 0.438926 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_10g0145200 | SBH | 1.339871 | 0.691157 | 0.752476 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os10g05590 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os10g0145200 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_10g0002510 | RBH | 0.0 | 0.000000 | 0.000000 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_10g0002470 | RBH | 0.0 | 0.000000 | 0.000000 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_10g0002410 | RBH | 0.0 | 0.000000 | 0.000000 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_10g0002380 | SBH | 0.232415 | 0.129334 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_10g0002330 | RBH | 0.000000 | 0.000000 | 0.000000 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_10G0047400 | RBH | 0.006018 | 0 | 0.121206 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_10g0002590 | RBH | 0.0 | 0.0 | 0.000000 |
| Zhenshan 97 | ZS97RS3 | HZAU | NA | NA | NA | NA | NA |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_10g0002410 | RBH | 0.000000 | 0.000000 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_10g0002430 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_10g0002510 | RBH | 0.0 | 0.000000 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_10g0002320 | RBH | 0.0 | 0.0 | 0.000000 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_10g0002520 | RBH | 0.000000 | 0.000000 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_10G002500 | RBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_10g0002220 | SBH | 1.417693 | 7.102009 | 7.091119 |
