Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsZS97_10G0039200 | OGI:10007370 | 2/16 | Zhenshan 97 | ZS97RS3 | HZAU | Chr10:2417881-2421091 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | TTACATTATGACGATAACAGCCTGTTTCCCGTCACTGACTGCCCGCAGTGACGAAATGGTTGTCATCACAAAAGGTGGGTCACTAACCAGCTTCTGTGACCAGCAGAGGACATCGTCATTGATACAGTGACGATAGTTCTCCTGTCATTGATGAATGACGAGACAAATTCGTCATAACAAATTGAACCGAATAACGCCACGTGTACGATGACATGTGATGTTGCAGATGACAAGGCGGGTGATGTGGCAAATGACGTGGCAATTCACATTCGGCCCATATAGCATGGGCTTTTTTATTTTCAATTACAATTGGCCCAAATATTTTTTTTGGCCCAGCTATAAATTTGCTTTTACGTTTTTTTATTCATTACAGCCCAACAGTACAATTCTAGCCCATATTATGGGCCAACCCAATTAAAAAGCAATCACAGAATATAAATCACAGCCTATAATCATATTCCAGCCATAATTAATTTTCCAGCCCATACAAAAGCAAGTTCCAGAATACAGTTTCCAACATGTTCCATACAAAAGCACAAAACATGAATACAAAATGATCCATCCACCATCCAACTACACAAGTACCTGTGCCTGTGCCTTCAATCTTTCAAGCTCCTCCTGAAGTACTGCAGACTCTAGCTTCTTTGCATCTAGTTCAACTTGTATCTCTATTATCACATTGGTTGTCTTGGCAGCGAGCTGCTAAATTTCGACGTTGCGCAAAAATGTGTTCGACTTCCGCAGCACTTTGGAAACATCTTCAATAGAAGTCTTAGCTTGCTGCCCATCTTCTACTGATGGTGAAGTGATGACTTCCCGAGCATGCATATCCTCCTAGCAATCAAAGCAAGATTTCAGTTTTGCATTATTATATAAATAAAGGTTCATTGCATAAGGTACTTAATAAAAGAAGGAAAGAAGAAGTAATAGTTTAGTACTTACTATAGCTTTATTCACAGGTTCACTAAAACCTTTAGTTTTGCTGCAATGCAACTCCTTAAAGAGATCAATTGCAGTGGGCTCACTGTCAATTGCAGTGCCCATGCTCTCCCCCCTTGGCTCCACTTGTCTACTGCCAGTGAGGGTGCCTAACATAAAACATTTACAGGTGTCAATAAAAAGATCCTGCACTTGATATGAATGAAGCATAGCACATATAAGGACAAAAGAACAAGAATCCAAGTTACTTGCCTTGTTCAGTAGTGCTCAATTCCATTGGCTCCAGTTCTGTACTTAAAGTGCGGTTGCTCAATCCCATTGCCGCCGCCCAATATGGTCGCCCAGGGCAAAGGCCCCGTCTGTGGCGCGAGAAGGAAGGGTTGAGGATGATGGCCGGCTGCGGCACGCCCAGGTTAGGGCTCCACCCGCCGATGCTCACCAGCGCCACCTGATCTTGCAGTCCCGAGGCCCTCATTCCTGTAGTCACATTCTGCAACACAGATGAAGAAAGGATCACAACATTGCATTAGAGTTGCAGAAGCTTCTGACTAGTAACCGGTTTTGCTAGGCAAATCTGTCAGTTGAGTAGGGTTTTAAGGAACATGATTTTAAAGAACATGTACTCTTTGAGCAAGTTTATAGCCAATTTAGTAAAAATCTCACATCTTATTTACATTCTTAAAGGGATATTTATGTGACAGACATTATATTGGATTACAGAAGGAGTCAGAGAGATGCTAGCCATGGCCTTTCTTCTCAGGAAGTGATGCTTCCCTTTTACCAGTGACATTTTCTGCTTTATGAACTACAGACTGAGGTGGAGATGCAGCAGTAGCTTCCCTTCCTACTTCTTCTACTGACTGCACTAAAGGATCCAAGCTAGAAAAAATTTCTTCCTTGGAGATATCATGATCTATATACTTGGATTAATTAAACTGAGTTCAGATTAATGCTACCACACCTAATATTAACAAAAAAAAGCTAGAAATAATTTCTTCCTTGGAGATATCATGATCTATATACTTGGATTAAACTGAGTTCAGATTAATGCTACCACACCTAACATTAACAAAAAAAAGGTGTTTGTTTTTCAAGAAGAATGCATGTGGTAAGTTTGGTACATAGTAGAGATCAAAGCAGTAAACAACAGCTCTGATCGGTTGGGCAGGCATAAACATCTTCATAACTATAATTAGTTAACCATGCATTTTTCTTGAAAGAACTTATCAGGAAGCCCATTGCAAAATAGAAAGCCCAAAAGAAGCGGTGCCATCAAATTCCACCCTTTGGTTCAGTTAGTTAATTTCCTTGGATGGATTGCTCACTTGTCCAAGCTATGAACCTCAAGTCATTTTGAGTTATGATCCTCAAGTCAATTTGAGTTGTGTAATGCCTCCAATTCACTCATGAATTATGATAAAAGTAATTAGGTACACCTGTACCAGTAAAGCACCTGTTCTAGTGACTATACGATCAGAAGAACAAGCTAAGCAAACAAACCCAGTGTACTAAAACTTAACAGCGCATTCGAATTTAGCAGAAAACAAGGGTCAGATTTTTGTCATGGGTGTGCCCACATGTCATAGTATAGTTGAGTCAAATAAAAAACTTGTTCACAGTAATATAATTAATCATTCCTAATTGCAGCGCTTCATTTTTACTCATTGCTAATTGACCTAGGAAGTAAAGACACAGGATCTCAATTCTCTGCATACAAATCACAAAAATATGCCTTGAACTGAACTGAGTTTACTCATTCTAGGTTTCAACTTTTCAATTAATCTCACTCTCTGCTAAGAGAAAAACCAAACCAGAGAGATTCTAGAAATACTCACTGAATATACCAGCCGTCAGCCGTGCACGTAGACAGATGAGTGAACGACGCTTGGAGCTGGACCTTTGGTTGGCATTCCGGCGCAACCATTGCTGGTCCAGTGCTCCTGGTCGCCGACTCGCTGGCCGCCGCGGCGTACAGCTCCTGTGCCGAGGCGCCGACGCTCGTCGTCGTCGCAGCTACCGTCGCAGCTGTCATCGCCGTCGTCGTCGTTGCAGCCACCATCGCCGTCGTTGCCGCAGCTGCCGCCACCGTAGCCGCTCGCTCCCGCTTTCCTAAGCCCTCCGCCGCTGCTCCGGAGGGTGGAGGCGGGCGGATCCGTGTGCTGCCGGCGCTCCCGCTCACGCCAGGCCACTCCCGAGGACGGAGGCCGCTGGATTCATGCGCCGCCGTCGCTCCCGAGGACGGGAGGCGGTGGATCCGCGCGCCACCGTCCTT
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| CDS seq | AAGGACGGTGGCGCGCGGATCCACCGCCTCCCGTCCTCGGGAGCGACGGCGGCGCATGAATCCAGCGGCCTCCGTCCTCGGGAGTGGCCTGGCGTGAGCGGGAGCGCCGGCAGCACACGGATCCGCCCGCCTCCACCCTCCGGAGCAGCGGCGGAGGGCTTAGGAAAGCGGGAGCGAGCGGCTACGGTGGCGGCAGCTGCGGCAACGACGGCGATGGTGGCTGCAACGACGACGACGGCGATGACAGCTGCGACGGTAGCTGCGACGACGACGAGCGTCGGCGCCTCGGCACAGGAGCTGTACGCCGCGGCGGCCAGCGAGTCGGCGACCAGGAGCACTGGACCAGCAATGGTTGCGCCGGAATGCCAACCAAAGAATGTGACTACAGGAATGAGGGCCTCGGGACTGCAAGATCAGGTGGCGCTGGTGAGCATCGGCGGGTGGAGCCCTAACCTGGGCGTGCCGCAGCCGGCCATCATCCTCAACCCTTCCTTCTCGCGCCACAGACGGGGCCTTTGCCCTGGGCGACCATATTGGGCGGCGGCAATGGGATTGAGCAACCGCACTTTAAGTACAGAACTGGAGCCAATGGAATTGAGCACTACTGAACAAGGCAATAGACAAGTGGAGCCAAGGGGGGAGAGCATGGGCACTGCAATTGACAGTGAGCCCACTGCAATTGATCTCTTTAAGGAGTTGCATTGCAGCAAAACTAAAGGTTTTAGTGAACCTGTGAATAAAGCTATAGAGGATATGCATGCTCGGGAAGTCATCACTTCACCATCAGTAGAAGATGGGCAGCAAGCTAAGACTTCTATTGAAGATGTTTCCAAACTCGCTGCCAAGACAACCAATGTGATAATAGAGATACAAGTTGAACTAGATGCAAAGAAGCTAGAGTCTGCAGTACTTCAGGAGGAGCTTGAAAGATTGAAGGCACAGGCACAGGAGAACTATCGTCACTGTATCAATGACGATGTCCTCTGCTGGTCACAGAAGCTGGTTAGTGACCCACCTTTTGTGATGACAACCATTTCGTCACTGCGGGCAGTCAGTGACGGGAAACAGGCTGTTATCGTCATAATGTAA
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| Protein seq | KDGGARIHRLPSSGATAAHESSGLRPREWPGVSGSAGSTRIRPPPPSGAAAEGLGKRERAATVAAAAATTAMVAATTTTAMTAATVAATTTSVGASAQELYAAAASESATRSTGPAMVAPECQPKNVTTGMRASGLQDQVALVSIGGWSPNLGVPQPAIILNPSFSRHRRGLCPGRPYWAAAMGLSNRTLSTELEPMELSTTEQGNRQVEPRGESMGTAIDSEPTAIDLFKELHCSKTKGFSEPVNKAIEDMHAREVITSPSVEDGQQAKTSIEDVSKLAAKTTNVIIEIQVELDAKKLESAVLQEELERLKAQAQENYRHCINDDVLCWSQKLVSDPPFVMTTISSLRAVSDGKQAVIVIM |
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| Function | - | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsZS97_10G0039200 | OsZS97_10T0039200-mRNA-1 | Chr10 | 2417881 | 2421091 | - | makerRMon | ||
| CDS seq | AAGGACGGTGGCGCGCGGATCCACCGCCTCCCGTCCTCGGGAGCGACGGCGGCGCATGAATCCAGCGGCCTCCGTCCTCGGGAGTGGCCTGGCGTGAGCGGGAGCGCCGGCAGCACACGGATCCGCCCGCCTCCACCCTCCGGAGCAGCGGCGGAGGGCTTAGGAAAGCGGGAGCGAGCGGCTACGGTGGCGGCAGCTGCGGCAACGACGGCGATGGTGGCTGCAACGACGACGACGGCGATGACAGCTGCGACGGTAGCTGCGACGACGACGAGCGTCGGCGCCTCGGCACAGGAGCTGTACGCCGCGGCGGCCAGCGAGTCGGCGACCAGGAGCACTGGACCAGCAATGGTTGCGCCGGAATGCCAACCAAAGAATGTGACTACAGGAATGAGGGCCTCGGGACTGCAAGATCAGGTGGCGCTGGTGAGCATCGGCGGGTGGAGCCCTAACCTGGGCGTGCCGCAGCCGGCCATCATCCTCAACCCTTCCTTCTCGCGCCACAGACGGGGCCTTTGCCCTGGGCGACCATATTGGGCGGCGGCAATGGGATTGAGCAACCGCACTTTAAGTACAGAACTGGAGCCAATGGAATTGAGCACTACTGAACAAGGCAATAGACAAGTGGAGCCAAGGGGGGAGAGCATGGGCACTGCAATTGACAGTGAGCCCACTGCAATTGATCTCTTTAAGGAGTTGCATTGCAGCAAAACTAAAGGTTTTAGTGAACCTGTGAATAAAGCTATAGAGGATATGCATGCTCGGGAAGTCATCACTTCACCATCAGTAGAAGATGGGCAGCAAGCTAAGACTTCTATTGAAGATGTTTCCAAACTCGCTGCCAAGACAACCAATGTGATAATAGAGATACAAGTTGAACTAGATGCAAAGAAGCTAGAGTCTGCAGTACTTCAGGAGGAGCTTGAAAGATTGAAGGCACAGGCACAGGAGAACTATCGTCACTGTATCAATGACGATGTCCTCTGCTGGTCACAGAAGCTGGTTAGTGACCCACCTTTTGTGATGACAACCATTTCGTCACTGCGGGCAGTCAGTGACGGGAAACAGGCTGTTATCGTCATAATGTAA
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| Protein seq | KDGGARIHRLPSSGATAAHESSGLRPREWPGVSGSAGSTRIRPPPPSGAAAEGLGKRERAATVAAAAATTAMVAATTTTAMTAATVAATTTSVGASAQELYAAAASESATRSTGPAMVAPECQPKNVTTGMRASGLQDQVALVSIGGWSPNLGVPQPAIILNPSFSRHRRGLCPGRPYWAAAMGLSNRTLSTELEPMELSTTEQGNRQVEPRGESMGTAIDSEPTAIDLFKELHCSKTKGFSEPVNKAIEDMHAREVITSPSVEDGQQAKTSIEDVSKLAAKTTNVIIEIQVELDAKKLESAVLQEELERLKAQAQENYRHCINDDVLCWSQKLVSDPPFVMTTISSLRAVSDGKQAVIVIM
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0 | 0.0163435 | 0.0485395 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os06g27610 | SBH | 0.0 | 0.000000 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | NA | NA | NA | NA | NA |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_06g0015430 | SBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_06g0012990 | SBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_04g0009400 | SBH | 0.0 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_06g0015310 | SBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_06g0015440 | SBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_10G0103800 | SBH | 0.0206525 | 0.0085385 | 0 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_06g0014930 | SBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_06G0192800 | RBH | 0 | 0 | 0 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_11g0009190 | SBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_10g0001600 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_11g0009240 | SBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_Ung0018340 | SBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_06g0013020 | SBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_06G015010 | SBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_11g0009150 | SBH | 0.0 | 0.0 | 0.0 |
