Rice Gene Index (RGI): a comprehensive pan-genome database for comparative and functional genomics of Asian rice.

Basic Info

Gene ID		OGI # \| Score			Accession \| Assembly \| Annotation			Location		Links
OsZS97_10G0004800		OGI:10001550 \| 16/16			Zhenshan 97 \| ZS97RS3 \| HZAU			Chr10:294569-302224		Homologues MicroCollinearity RGI-JBrowse
Gene Symbol		-
DNA seq		ACTTAAATTACTAAATTTGGTTGTTAACATGTTCCAAGTAGCGACGGCGCTAGGTGGGGCTCCACGCCTCCACTTCTCCTCGACAAGGTCGGAAGACGCGGACGACGGTTGCGCTGAGTGGAGCCGCAGACGACGGCGCCGTCGAGCTGTGGATCTCGAGAGGCTCCTCTTCCTCTCCGTCGCCTCCCTCACCATCTCCGGATTGACATCCGCTGCGTGACCTCTCCCTCTCCGTCGACTTCTTCTCCCCCGTTTATCTTCCTCACTGTCGGCGCCCACGCAACGGCGGCAATCTCGTTGAGCACGGATCTAACCGGAGAGGTGGTCCAGGCGGCGTTGTCTCCAAGCCCACGTAAGCTGTGGCGGCAGCCTCGGCGGTGGCGGAGAAGTCGGAGCAGAGGAGTTGTAGCTTTGGATCGGTCGCACCCACTTTCCGAGGCTCGTTTCCTTGCTTTTTCTGACAAAGCTAGCTGAAGAAGGAGTGCCCTTGTTTGGACGCGCGGGCTTCTGGTGGGGAGCGCCAGCTACAGACGTGGCACCTAATCTCCAATGTGTCACACATAGCTAGGCAGGAGCAATGTGAATGGTACTGCGGCTTAGGGATGTCAGTTAAACTCAAAGACATAATAAACATATGGGACAGCAAGTGGACTTATTCCGTGAAATGGGCCAAAAGGTTAGGCAAGCTGTGCGGGTGGGCCTAGCCCATGTGCACCCTCTTCTACTTCTAGGAGGAGAGGAGTAGTTGCTTGCTCATGTCATGTTGCGTTGCGTTGCGGGAGGAAGAAGGGAATCTGATTGCTTCCTTCTTCCTTCTTCGATTCAGAATCACTTTGTTTCTTCCTTCTTCTTCTATCTATCTATCTACCTGTGGAGACGAGAGGAGAGGAAATCTATGGCGTCTCCTCCTCCTTCGCCCTCCGCATCACGCGCAATCGCAGTCGAGAGATCACCGGGGTTCGGCTTGGAGCCCTCCTCCTCCTCCTCCTCCTCCTCGTCGTCGTCGGCCCCCTCAAGGTAATCCCTATCCCCATCCTAATTTTGGACCCCAACCCTCGCCCACGCTCCTGCCCCCGCCCCCGCCTGCCAAGGAAATTTAATTTTATTTTCTCTCTCTCTCTCAGCTAGCTTTGCCCCAAGTAACCACTAACTCTTTTCAATCTCACTGTTTCTTCTTTCCTACTAGTTCCGCACAAACTTCAACTTCTCTAGCTCTACCTCCTCAGATTTCTGCCCAATTCATTCAAAAGAATTGCATTATGTAAACAAGAATTGCTAGTACCCATCGTAACGTCGGATTTTCTATCTAGGTTTACCCGTTCCTGGCATCATATTCATGGGGGGAGACACCCTGGACATACACTAATCTCTGCAACTCTTAATCTAACACCCCACTCGCATTCTGCACTACAACTGAACCCATCACAACACTAAGCTCAGGTTGCATGCTTAAACCCTGCTCCTGTCTTCTGTGCTTCATAAGTGCTCTTCATCCCCTTTCTAATTAAGGAAATCATCACTAAGAGGATCACCCTTGTCATTTCCGCTCAAAAATATTTTTCTTTTCTTTTTTTTTCAACAAAAAAAACACTACTTCAATCCTCCACTGTACCACATACCACCCAACAATTCTGGTCGATTTTGTTTTGAGCCTATCTCCATTTTCTGTAAAAGCATATGTCCTTATATCCTTTTAAGCACTTCTCAACCTTTTGTTTCTTTTTGTCTTTTCAGGAATGAGCTGCTGACTATGGTGAAAAAACATTCCCATTTGATTGGGTGGACAGTTGTTGATGCTGAAGATGATGCATCAGACGTGGGAATGGATGATCGATTCTGGCATGAAATGCTTGATCTTTTCTTCGTGCGTGGTAGGGTTTCAAAGAGGAGGGAAGAGGATGACCTCGTCTTTTTTGTTAATAATAATATGGTAAACTTCCAATCCTTCTCAGTTCCCCTTATTTTAGCTTACAGTGTTATCTTGTATGCTAACTGAGGCTCAATGCTGGTGCAGAAAATGCATGGCCATGGGTTCAACGATAACATGGAAGATCCACCTCCTTTTTTTGTGAGAAGATGGGCTCCTATGGTAAATTAACCAAGACTATCTTCGTCAATTTCGATCATATCAATAAATGCATGCTTCCCTTTTTGGTAGTAGCTTCAAGGAAACTTTTCATATGACATACTCTTTCCTTCCATTTTAGAATTTTTTTCTGTAATTTCCTGTTGAGTTATTCACTTTAAAACTGTATCAAGATGAACTGCATCAACTATTACATATTTTTTCACTCATGTTTTTTTTCCCCTATCTAATAGCATTTATTATTCCTTGCACTAGCACTAGTAAGTTTTGTAGTGTATTTATGGTTGCCACGATTTGATAGACTTGAATATGGTAAATTGACTTCCATAAGCTAGTGTTTGGTTCATAACATACTTTCTACAGAAAAGAAGTCTCTGATAATACATACTAACTCTTGGTTTTTTATTTGTTCTCCTTTGTTTTATGTGGAGCAGCTTGAAAAGATCAGCAATATAAATTCAGCTGGAGTTGATTGGGAGCGTTCATTCTATTTGAATTTAATTGCTCACACATCATACACTGTTACAGTTGCAATATGCAGGTACGTTTCTGCCAGTTCTGTCAAGATATTGCAAGTTTTTATCTAGTATTTATACTGAATGATTGGCATGCTGTTATTTATGTCAACAATGAAAAGTTTTTGGCATGCTGTTATTTATGTCAACAATGAAAAGTTTATTTGGTGATGCACATCCTCTTGCTGGTCCCAATCTGTCAGAGTAAAACGTTACCTGTACTTTTGGTCTAAGTTCTTATCCTTCCTTCACTGTAATGCAACACAGTTGCCACATGTTGTCTGTACTTGGTGTATGCTTCTATTTTCTGTTTCTTGTAGCAGCTGAGAACTGGTCTAGGTTAGTTCATTAACTCGCAACAAGTTAGATTGATGTACTGTATCTTTCAATATTACTTTGGACTTCGTCCTGGCATCACAGGGAGGGAGAAGGGGGGGGGGGGGGGGTGGTGGTTCTCACAGATGTTTGGGTTCCAACCAATAACTATTGTTGTGCAACCTGAGCCTGAGAGCTCTTGTTGTATCATCTTTACCTCCTTAGTTGATATATCTGGCAAAGTTAGTTTCTTACAATCTGCTCTACAGTGTCAGGGATCTTCGCAGCCGTGCAGAGAAAAGCAAACCATTATCACCAGTTTATAAGGTACTGTACAAGTAAGCATTTCACGGCACTCCATCATTTACCAGTGAATCTTATTACATAGGTGCACAGACTTGTGTTGTGTAAGGTTGAGCTTTGTGTAATGACTACTTAGAATTCACTATGATTAATAGTTTCAGAACATTCCACAATTTCTGCTGTTCAATGACTGTAGGAAGTTTCATTATATCATGGATGCTTGTGGAAAATTGGATTTTCTTATAACTGACTTTATCCAGTTATATCATGATGTCTTAGACTTGTTAATAGAACTACAAAATTAATATAAGTTTCAAGCCTAACATCTTAGAGGTCTATATCCCAAAATGTTGTAGTTTGAAACTAGTCGTTATTGCTTTATTTTCTGTCGATCTGGACAGCAATTGCAGAACACTTTTAAACCAGACCTGGTCACATGGCCATTTCGCTGGTTTTCCTGTAGGAACACTGTTCGATGATGGCAACATTTTAATTTTTTCAACAAATTGATTTGGAAAACTGACAGTTATTTGAGTTGTTTACAAGCTAATATAACCTAATATTTTTTTCTTATGCGTATTATAGCCCAACAGTAGGCCTGGTCACTTGATTCCTTCCTACAGTTAGAAGGCAAAGGGGTTTCAGTTCAAATCTCCATGTTAACAATTCCTTTAAATTTTGTTTTTTGCCTGTTTTGGGGCTAAACAATCCAGATTGTGAACAAGACTGGAACATGCTTCTGTTGAGGCACTTCTCAGTGTGTTTAAGATCATTTCTAAAGTGTACAACTAGGGTTTCTTTTCTTCCTATTCTTGGGTCGAAATGAGCCTGACTAGCTGTCCATTTTATTTAACTTCGACTTCTATATTTCATTGTTGCAATACTAGTTACCCTAGCTAAAGTTTAACATGTTTTCGGTATTAAGTAATTATGTCTTAAACTCATTGTCTTATTAAAACAGGTCACACAAACTGTGTATGCATCCCCAAGCCGTGTAAATTTTCATCTTGATCGAAGAAAGGTACTTTTTCCTGGCATTTTCAGTCTCTCTTTTGAAAGAGATGATGTTTCAGTAAAAATTCCTGTATCTTTGGACAGGCTGTGGAAACTGTACCTGCATATCCCAATATTTGTTTCTCAGTTGATGACTTCGATGATACTTTTGATGCTGTTGTAAGTTCCCATTTCTCAGTATTCTAGCATATTGTTCATATGGATGTATCTATGATATTGCATCGCTTTTGTCATTATAGAATGAAAGTGACCATCTAAATTTGAGCAGGTTTTGTCAGACCCCGAACATTGCTATTGTGTGATTCTCAATGCACATGATGGGGCAGCTTTTCCTGAAGACACTGAATCGAAGAATGCCAGCTCAAATCTACTAAACACTGGGAGCAACCAAGAAAAACCACCAAAGGTCCTCTGCCCTCAAATCTACCAAAACTCTCTCTCTCTCAGAATTCAGCACTTAGTAAATTCTCCCTGTGTCTCAAACTATAGGAGCATTCTGATTTTGTCCCAAATTATTTCGCCACCTACTCCCTCATCTCAACCAATCAAAATAATCTCTTATTTAATTTGTTCACTTACATTACATCATCTCAACCACAACTATCCTCCATTTAATTCCATGTATTTCCTTAATACCTGTGCAACACTCTAAAGGTGGCTATATTTTGGGACGTAGGGAGTATATTCTTTATCACTGTTGCAATTAAAGATCAGAAGTTTTAATCTGTTTTTGAAAGACTTATGTATAGTTAATCTGCAGTAATTTCTTGTTTTAATTAGTAATTGAATGTCAAATCCATCTTATCTGTGAAACTGTGATCATGTATTTAAAACCGTAAGATATACTTCCTCCGTTTCACAATGTAAGTCATTCTAGCATTTTCCACATTCAAATTAATGTTAATGAATCTAGATAGATATATATGTTTAGATTCATTAACATCAATATGAATGTGGGAAATGCTAGAATGACTTACATTGTGAAACGGAGGGAGTATCTGAGCCCCATCGTTTGGCCTAAACAGCCAAAGAATAAGCCAAAATTTAAATTTTTGAACTTGATTTTGAAGTTGATTTTGAGATGCTTTTAACATAATTTTTGTTAGTGTTGGCTTTTAAGTCGCTACGAACAAATCTATAAAAGTTTTACTTATAAATTAATTTTTATTTTCTAATAAGCCATTTTGGCTTATTAGGCAAAATGGGCAACCGATGGGAGCCTCTTGTAGTTGAACTTTTGTTGTTGACAACCGGGAAATTATTGTGTTCACACTCACAACAGTTTGAGAGTTCAGACCCCATACTATCAGTGTCACAGTAAGTAATATTCATTTTGCACCTCAACCTTTTCTGCTGCTATAAATATATAATAATTTTTGAAGTACATACGTCCTGGTTTTCTTCCTACTGGCATCACTCTTGCTTAAAACATAGTTACACTTTAGCAGATATCCGCTTCTGTAACACAACTGTATGAAGTATATCATAGTTCATTTCTCACCTACATTGCGCTTACTGTGATTATTGCAGAGAACACTCTTCTCAGGCTACGTTAGCTACCAAAATGTTCGAGAAGCCTACAATGGTGAGTCCATCCATCTATTTATCTCCAAGGAAACTATTGTTCAGATGGTCTTATAAAGAACTTATGTCCTTTCAACTTTATCTACCTGGAAACTATTGTCATGTTCGAGAAACCTATTAAGTATTTATCTTTCTGTCATTTTTTTCTTCCAAAGCTAAACTCAATAGAATCATGTGTTTTTTATGACACTGCTTTTAACTGCATCAACACTTTGCTCAACTAGAGGATTTCCTCTTTAAAAAATATAAATTAGTAGGTACCTAACATTTCATTCCTTCTAGGTTTACATTTCCTGATATGTACTCTGTTATAGCTGGCAGATCACAATTTGGGAGCTTACTCTCACTCGGGCATGACCAAACTAAACTTGATAAACTTTATATGAGGGGCCCTGAAGGACGTGGGGAAGTTGAAGTAGCTGTTTCTGGAATTGCAGGTCAGTTATGTTTAGCCTAAGTAGCGATTTACTGCGTGGGTTGACTCTGGAATATGTTTCACAAGCTTCAAGTTATCTCGTTGTTACATGCATTTACTGTAATGAGTAGGATTTGGGGCTCAGATAAAATCATGATGCACATCTGACTATGGTAAACTACTCTCATATCTTTATTACTGTTGATTGTTCTACCAGTCGCCACTTTTTGTTGCAATGCGTTTGCATTTAGCATTTGCTATGTTAAATGATACAATATTAAAGTGCTTACAAATATCCTTTCTGTACAACCCCCCAACATGCACATTCATGTCGGATTACCGTAGCTGTGATGATGCAAGTTGTTGATCCATCAAACTCTGACATGGAAATGATTGTCTTTTATTAGATCAGAGCCATGAGAGATCAAAGAAAGATCCAGGAGATAGCTTTCGAGTCTTTGTTCATAGGGCAGCTTCTGCTGCATCAAAGCTGGCAAAGCATGCCTACGAGGCTGCATCTACCAACAAACGATTTGATCATGAGCTTCTGCCTCTGAAATGTTGCTTGATGTCGGTATCTCTTCCTTGGGACTACATTGCACATGACCTGCTACACAAGGTGAAAACCATCACTACTTGCAAATGATATGATTGTTTTGATGTCTAAAATTATTTTTTTGAACTGAAATGTCTAAAATTGTTGATAACTATTTTCATTTTCCTGCTTATTTTTTAGTCACAGATTACCGAGTATTGGCTGTTGTCAAACAATATAGTCCACGTGTAAAGTTGTTGATAACTAGTTTCATTTTCTTGGTTATTTTTATTTGTCGCAATTATCGTCTATGTGCTTTGATGAAATTAATTTGGTTACGTTAGTCCATACATCTAGAGGATGTTTTCATGGACATCCTTCATTTTCATGGTTCCATGTGTGGAAGAAATATAGACCTTCAAAACATAAGTTATATTGGCTGAATAATAAGTGGGCTAGTTGCTTCTCAATTTTGAATGCAATCCACTTGACAGAATAGTTCAGGTTGAGTATATCTAGCTTACAATATGATCACGCTATGTAACAGGAAACCCCTCCGCTGGACCTATGAGAGACTGCGAATTCCCATTGTGCACCAGAAAGAATGATATATGTGCATGATTGTGGGAAAGTTTGTGTCCCTTGGGCTCGATATAGTGTAAGAAAACAGTGAGCAGAGAAGCAGTGCTGCGATGTACATGTGTACTTTAAACAGACTAAAACTTGTAGAATTTTCATGTGTGTTTGTACAATGTTGAAAGTAGGCGATGAAATAATGTAAATATATATTTTTTTGGTTGTCATGAGGAAGACTCTTCACTGTTGTTATTTTGTTCTGTTTTGCGCTCGCGTACATGCAAAGACGCGAATGCAGGTACTGTTAACCCAG More
CDS seq		ATGTTGCGTTGCGTTGCGGGAGGAAGAAGGGAATCTGATTGCTTCCTTCTTCCTTCTTCGATTCAGAATCACTTTGTTTCTTCCTTCTTCTTCTATCTATCTATCTACCTGTGGAGACGAGAGGAGAGGAAATCTATGGCGTCTCCTCCTCCTTCGCCCTCCGCATCACGCGCAATCGCAGTCGAGAGATCACCGGGGTTCGGCTTGGAGCCCTCCTCCTCCTCCTCCTCCTCCTCGTCGTCGTCGGCCCCCTCAAGGAATGAGCTGCTGACTATGGTGAAAAAACATTCCCATTTGATTGGGTGGACAGTTGTTGATGCTGAAGATGATGCATCAGACGTGGGAATGGATGATCGATTCTGGCATGAAATGCTTGATCTTTTCTTCGTGCGTGGTAGGGTTTCAAAGAGGAGGGAAGAGGATGACCTCGTCTTTTTTGTTAATAATAATATGAAAATGCATGGCCATGGGTTCAACGATAACATGGAAGATCCACCTCCTTTTTTTGTGAGAAGATGGGCTCCTATGCTTGAAAAGATCAGCAATATAAATTCAGCTGGAGTTGATTGGGAGCGTTCATTCTATTTGAATTTAATTGCTCACACATCATACACTGTTACAGTTGCAATATGCAGTGTCAGGGATCTTCGCAGCCGTGCAGAGAAAAGCAAACCATTATCACCAGTTTATAAGGTCACACAAACTGTGTATGCATCCCCAAGCCGTGTAAATTTTCATCTTGATCGAAGAAAGGCTGTGGAAACTGTACCTGCATATCCCAATATTTGTTTCTCAGTTGATGACTTCGATGATACTTTTGATGCTGTTGTTTTGTCAGACCCCGAACATTGCTATTGTGTGATTCTCAATGCACATGATGGGGCAGCTTTTCCTGAAGACACTGAATCGAAGAATGCCAGCTCAAATCTACTAAACACTGGGAGCAACCAAGAAAAACCACCAAAGAGAACACTCTTCTCAGGCTACGTTAGCTACCAAAATGTTCGAGAAGCCTACAATGCTGGCAGATCACAATTTGGGAGCTTACTCTCACTCGGGCATGACCAAACTAAACTTGATAAACTTTATATGAGGGGCCCTGAAGGACGTGGGGAAGTTGAAGTAGCTGTTTCTGGAATTGCAGATCAGAGCCATGAGAGATCAAAGAAAGATCCAGGAGATAGCTTTCGAGTCTTTGTTCATAGGGCAGCTTCTGCTGCATCAAAGCTGGCAAAGCATGCCTACGAGGCTGCATCTACCAACAAACGATTTGATCATGAGCTTCTGCCTCTGAAATGTTGCTTGATGTCGGTATCTCTTCCTTGGGACTACATTGCACATGACCTGCTACACAAGGTGAAAACCATCACTACTTGCAAATGA More
Protein seq		MLRCVAGGRRESDCFLLPSSIQNHFVSSFFFYLSIYLWRREERKSMASPPPSPSASRAIAVERSPGFGLEPSSSSSSSSSSSAPSRNELLTMVKKHSHLIGWTVVDAEDDASDVGMDDRFWHEMLDLFFVRGRVSKRREEDDLVFFVNNNMKMHGHGFNDNMEDPPPFFVRRWAPMLEKISNINSAGVDWERSFYLNLIAHTSYTVTVAICSVRDLRSRAEKSKPLSPVYKVTQTVYASPSRVNFHLDRRKAVETVPAYPNICFSVDDFDDTFDAVVLSDPEHCYCVILNAHDGAAFPEDTESKNASSNLLNTGSNQEKPPKRTLFSGYVSYQNVREAYNAGRSQFGSLLSLGHDQTKLDKLYMRGPEGRGEVEVAVSGIADQSHERSKKDPGDSFRVFVHRAASAASKLAKHAYEAASTNKRFDHELLPLKCCLMSVSLPWDYIAHDLLHKVKTITTCK
Function		Uncharacterized protein KIAA0930 homolog [UniProtKB/Swiss-Prot:Q801S4]

Transcripts

Gene	Transcript	Chromosome	Start	End	Strand	Source
OsZS97_10G0004800	OsZS97_10T0004800-mRNA-1	Chr10	294569	302224	+	makerRMon
CDS seq	ATGTTGCGTTGCGTTGCGGGAGGAAGAAGGGAATCTGATTGCTTCCTTCTTCCTTCTTCGATTCAGAATCACTTTGTTTCTTCCTTCTTCTTCTATCTATCTATCTACCTGTGGAGACGAGAGGAGAGGAAATCTATGGCGTCTCCTCCTCCTTCGCCCTCCGCATCACGCGCAATCGCAGTCGAGAGATCACCGGGGTTCGGCTTGGAGCCCTCCTCCTCCTCCTCCTCCTCCTCGTCGTCGTCGGCCCCCTCAAGGAATGAGCTGCTGACTATGGTGAAAAAACATTCCCATTTGATTGGGTGGACAGTTGTTGATGCTGAAGATGATGCATCAGACGTGGGAATGGATGATCGATTCTGGCATGAAATGCTTGATCTTTTCTTCGTGCGTGGTAGGGTTTCAAAGAGGAGGGAAGAGGATGACCTCGTCTTTTTTGTTAATAATAATATGAAAATGCATGGCCATGGGTTCAACGATAACATGGAAGATCCACCTCCTTTTTTTGTGAGAAGATGGGCTCCTATGCTTGAAAAGATCAGCAATATAAATTCAGCTGGAGTTGATTGGGAGCGTTCATTCTATTTGAATTTAATTGCTCACACATCATACACTGTTACAGTTGCAATATGCAGTGTCAGGGATCTTCGCAGCCGTGCAGAGAAAAGCAAACCATTATCACCAGTTTATAAGGTCACACAAACTGTGTATGCATCCCCAAGCCGTGTAAATTTTCATCTTGATCGAAGAAAGGCTGTGGAAACTGTACCTGCATATCCCAATATTTGTTTCTCAGTTGATGACTTCGATGATACTTTTGATGCTGTTGTTTTGTCAGACCCCGAACATTGCTATTGTGTGATTCTCAATGCACATGATGGGGCAGCTTTTCCTGAAGACACTGAATCGAAGAATGCCAGCTCAAATCTACTAAACACTGGGAGCAACCAAGAAAAACCACCAAAGAGAACACTCTTCTCAGGCTACGTTAGCTACCAAAATGTTCGAGAAGCCTACAATGCTGGCAGATCACAATTTGGGAGCTTACTCTCACTCGGGCATGACCAAACTAAACTTGATAAACTTTATATGAGGGGCCCTGAAGGACGTGGGGAAGTTGAAGTAGCTGTTTCTGGAATTGCAGGTCAGTTATGTTTAGCCTAA More
Protein seq	MLRCVAGGRRESDCFLLPSSIQNHFVSSFFFYLSIYLWRREERKSMASPPPSPSASRAIAVERSPGFGLEPSSSSSSSSSSSAPSRNELLTMVKKHSHLIGWTVVDAEDDASDVGMDDRFWHEMLDLFFVRGRVSKRREEDDLVFFVNNNMKMHGHGFNDNMEDPPPFFVRRWAPMLEKISNINSAGVDWERSFYLNLIAHTSYTVTVAICSVRDLRSRAEKSKPLSPVYKVTQTVYASPSRVNFHLDRRKAVETVPAYPNICFSVDDFDDTFDAVVLSDPEHCYCVILNAHDGAAFPEDTESKNASSNLLNTGSNQEKPPKRTLFSGYVSYQNVREAYNAGRSQFGSLLSLGHDQTKLDKLYMRGPEGRGEVEVAVSGIAGQLCLA More

Gene	Transcript	Chromosome	Start	End	Strand	Source
OsZS97_10G0004800	OsZS97_10T0004800-mRNA-2	Chr10	294569	301563	+	makerRMon
CDS seq	ATGTTGCGTTGCGTTGCGGGAGGAAGAAGGGAATCTGATTGCTTCCTTCTTCCTTCTTCGATTCAGAATCACTTTGTTTCTTCCTTCTTCTTCTATCTATCTATCTACCTGTGGAGACGAGAGGAGAGGAAATCTATGGCGTCTCCTCCTCCTTCGCCCTCCGCATCACGCGCAATCGCAGTCGAGAGATCACCGGGGTTCGGCTTGGAGCCCTCCTCCTCCTCCTCCTCCTCCTCGTCGTCGTCGGCCCCCTCAAGGAATGAGCTGCTGACTATGGTGAAAAAACATTCCCATTTGATTGGGTGGACAGTTGTTGATGCTGAAGATGATGCATCAGACGTGGGAATGGATGATCGATTCTGGCATGAAATGCTTGATCTTTTCTTCGTGCGTGGTAGGGTTTCAAAGAGGAGGGAAGAGGATGACCTCGTCTTTTTTGTTAATAATAATATGAAAATGCATGGCCATGGGTTCAACGATAACATGGAAGATCCACCTCCTTTTTTTGTGAGAAGATGGGCTCCTATGCTTGAAAAGATCAGCAATATAAATTCAGCTGGAGTTGATTGGGAGCGTTCATTCTATTTGAATTTAATTGCTCACACATCATACACTGTTACAGTTGCAATATGCAGTGTCAGGGATCTTCGCAGCCGTGCAGAGAAAAGCAAACCATTATCACCAGTTTATAAGGTCACACAAACTGTGTATGCATCCCCAAGCCGTGTAAATTTTCATCTTGATCGAAGAAAGGCTGTGGAAACTGTACCTGCATATCCCAATATTTGTTTCTCAGTTGATGACTTCGATGATACTTTTGATGCTGTTGTTTTGTCAGACCCCGAACATTGCTATTGTGTGATTCTCAATGCACATGATGGGGCAGCTTTTCCTGAAGACACTGAATCGAAGAATGCCAGCTCAAATCTACTAAACACTGGGAGCAACCAAGAAAAACCACCAAAGAGAACACTCTTCTCAGGCTACGTTAGCTACCAAAATGTTCGAGAAGCCTACAATGCTGGCAGATCACAATTTGGGAGCTTACTCTCACTCGGGCATGACCAAACTAAACTTGATAAACTTTATATGAGGGGCCCTGAAGGACGTGGGGAAGTTGAAGTAGCTGTTTCTGGAATTGCAGATCAGAGCCATGAGAGATCAAAGAAAGATCCAGGAGATAGCTTTCGAGTCTTTGTTCATAGGGCAGCTTCTGCTGCATCAAAGCTGGCAAAGCATGCCTACGAGGCTGCATCTACCAACAAACGATTTGATCATGAGCTTCTGCCTCTGAAATGTTGCTTGATGTCGGTATCTCTTCCTTGGGACTACATTGCACATGACCTGCTACACAAGGTGAAAACCATCACTACTTGCAAATGA More
Protein seq	MLRCVAGGRRESDCFLLPSSIQNHFVSSFFFYLSIYLWRREERKSMASPPPSPSASRAIAVERSPGFGLEPSSSSSSSSSSSAPSRNELLTMVKKHSHLIGWTVVDAEDDASDVGMDDRFWHEMLDLFFVRGRVSKRREEDDLVFFVNNNMKMHGHGFNDNMEDPPPFFVRRWAPMLEKISNINSAGVDWERSFYLNLIAHTSYTVTVAICSVRDLRSRAEKSKPLSPVYKVTQTVYASPSRVNFHLDRRKAVETVPAYPNICFSVDDFDDTFDAVVLSDPEHCYCVILNAHDGAAFPEDTESKNASSNLLNTGSNQEKPPKRTLFSGYVSYQNVREAYNAGRSQFGSLLSLGHDQTKLDKLYMRGPEGRGEVEVAVSGIADQSHERSKKDPGDSFRVFVHRAASAASKLAKHAYEAASTNKRFDHELLPLKCCLMSVSLPWDYIAHDLLHKVKTITTCK More

Gene	Transcript	Chromosome	Start	End	Strand	Source
OsZS97_10G0004800	OsZS97_10T0004800-mRNA-3	Chr10	294569	301563	+	makerRMon
CDS seq	ATGTTGCGTTGCGTTGCGGGAGGAAGAAGGGAATCTGATTGCTTCCTTCTTCCTTCTTCGATTCAGAATCACTTTGTTTCTTCCTTCTTCTTCTATCTATCTATCTACCTGTGGAGACGAGAGGAGAGGAAATCTATGGCGTCTCCTCCTCCTTCGCCCTCCGCATCACGCGCAATCGCAGTCGAGAGATCACCGGGGTTCGGCTTGGAGCCCTCCTCCTCCTCCTCCTCCTCCTCGTCGTCGTCGGCCCCCTCAAGGAATGAGCTGCTGACTATGGTGAAAAAACATTCCCATTTGATTGGGTGGACAGTTGTTGATGCTGAAGATGATGCATCAGACGTGGGAATGGATGATCGATTCTGGCATGAAATGCTTGATCTTTTCTTCGTGCGTGGTAGGGTTTCAAAGAGGAGGGAAGAGGATGACCTCGTCTTTTTTGTTAATAATAATATGAAAATGCATGGCCATGGGTTCAACGATAACATGGAAGATCCACCTCCTTTTTTTGTGAGAAGATGGGCTCCTATGCTTGAAAAGATCAGCAATATAAATTCAGCTGGAGTTGATTGGGAGCGTTCATTCTATTTGAATTTAATTGCTCACACATCATACACTGTTACAGTTGCAATATGCAGTGTCAGGGATCTTCGCAGCCGTGCAGAGAAAAGCAAACCATTATCACCAGTTTATAAGGTCACACAAACTGTGTATGCATCCCCAAGCCGTGTAAATTTTCATCTTGATCGAAGAAAGGCTGTGGAAACTGTACCTGCATATCCCAATATTTGTTTCTCAGTTGATGACTTCGATGATACTTTTGATGCTGTTAGAACACTCTTCTCAGGCTACGTTAGCTACCAAAATGTTCGAGAAGCCTACAATGCTGGCAGATCACAATTTGGGAGCTTACTCTCACTCGGGCATGACCAAACTAAACTTGATAAACTTTATATGAGGGGCCCTGAAGGACGTGGGGAAGTTGAAGTAGCTGTTTCTGGAATTGCAGATCAGAGCCATGAGAGATCAAAGAAAGATCCAGGAGATAGCTTTCGAGTCTTTGTTCATAGGGCAGCTTCTGCTGCATCAAAGCTGGCAAAGCATGCCTACGAGGCTGCATCTACCAACAAACGATTTGATCATGAGCTTCTGCCTCTGAAATGTTGCTTGATGTCGGTATCTCTTCCTTGGGACTACATTGCACATGACCTGCTACACAAGGTGAAAACCATCACTACTTGCAAATGA More
Protein seq	MLRCVAGGRRESDCFLLPSSIQNHFVSSFFFYLSIYLWRREERKSMASPPPSPSASRAIAVERSPGFGLEPSSSSSSSSSSSAPSRNELLTMVKKHSHLIGWTVVDAEDDASDVGMDDRFWHEMLDLFFVRGRVSKRREEDDLVFFVNNNMKMHGHGFNDNMEDPPPFFVRRWAPMLEKISNINSAGVDWERSFYLNLIAHTSYTVTVAICSVRDLRSRAEKSKPLSPVYKVTQTVYASPSRVNFHLDRRKAVETVPAYPNICFSVDDFDDTFDAVRTLFSGYVSYQNVREAYNAGRSQFGSLLSLGHDQTKLDKLYMRGPEGRGEVEVAVSGIADQSHERSKKDPGDSFRVFVHRAASAASKLAKHAYEAASTNKRFDHELLPLKCCLMSVSLPWDYIAHDLLHKVKTITTCK More

Gene	Transcript	Chromosome	Start	End	Strand	Source
OsZS97_10G0004800	OsZS97_10T0004800-mRNA-4	Chr10	294569	301563	+	makerRMon
CDS seq	ATGTTGCGTTGCGTTGCGGGAGGAAGAAGGGAATCTGATTGCTTCCTTCTTCCTTCTTCGATTCAGAATCACTTTGTTTCTTCCTTCTTCTTCTATCTATCTATCTACCTGTGGAGACGAGAGGAGAGGAAATCTATGGCGTCTCCTCCTCCTTCGCCCTCCGCATCACGCGCAATCGCAGTCGAGAGATCACCGGGGTTCGGCTTGGAGCCCTCCTCCTCCTCCTCCTCCTCCTCGTCGTCGTCGGCCCCCTCAAGGAATGAGCTGCTGACTATGGTGAAAAAACATTCCCATTTGATTGGGTGGACAGTTGTTGATGCTGAAGATGATGCATCAGACGTGGGAATGGATGATCGATTCTGGCATGAAATGCTTGATCTTTTCTTCGTGCGTGGTAGGGTTTCAAAGAGGAGGGAAGAGGATGACCTCGTCTTTTTTGTTAATAATAATATGAAAATGCATGGCCATGGGTTCAACGATAACATGGAAGATCCACCTCCTTTTTTTGTGAGAAGATGGGCTCCTATGCTTGAAAAGATCAGCAATATAAATTCAGCTGGAGTTGATTGGGAGCGTTCATTCTATTTGAATTTAATTGCTCACACATCATACACTGTTACAGTTGCAATATGCAGTGTCAGGGATCTTCGCAGCCGTGCAGAGAAAAGCAAACCATTATCACCAGTTTATAAGGTACTGTACAATAAAAATTCCTGTATCTTTGGACAGGCTGTGGAAACTGTACCTGCATATCCCAATATTTGTTTCTCAGTTGATGACTTCGATGATACTTTTGATGCTGTTAGAACACTCTTCTCAGGCTACGTTAGCTACCAAAATGTTCGAGAAGCCTACAATGCTGGCAGATCACAATTTGGGAGCTTACTCTCACTCGGGCATGACCAAACTAAACTTGATAAACTTTATATGAGGGGCCCTGAAGGACGTGGGGAAGTTGAAGTAGCTGTTTCTGGAATTGCAGATCAGAGCCATGAGAGATCAAAGAAAGATCCAGGAGATAGCTTTCGAGTCTTTGTTCATAGGGCAGCTTCTGCTGCATCAAAGCTGGCAAAGCATGCCTACGAGGCTGCATCTACCAACAAACGATTTGATCATGAGCTTCTGCCTCTGAAATGTTGCTTGATGTCGGTATCTCTTCCTTGGGACTACATTGCACATGACCTGCTACACAAGGTGAAAACCATCACTACTTGCAAATGA More
Protein seq	MLRCVAGGRRESDCFLLPSSIQNHFVSSFFFYLSIYLWRREERKSMASPPPSPSASRAIAVERSPGFGLEPSSSSSSSSSSSAPSRNELLTMVKKHSHLIGWTVVDAEDDASDVGMDDRFWHEMLDLFFVRGRVSKRREEDDLVFFVNNNMKMHGHGFNDNMEDPPPFFVRRWAPMLEKISNINSAGVDWERSFYLNLIAHTSYTVTVAICSVRDLRSRAEKSKPLSPVYKVLYNKNSCIFGQAVETVPAYPNICFSVDDFDDTFDAVRTLFSGYVSYQNVREAYNAGRSQFGSLLSLGHDQTKLDKLYMRGPEGRGEVEVAVSGIADQSHERSKKDPGDSFRVFVHRAASAASKLAKHAYEAASTNKRFDHELLPLKCCLMSVSLPWDYIAHDLLHKVKTITTCK More

Event Type

Chromosome

Start

End

Strand

Alternative mRNAs

Total mRNAs

Source

Expression

	Leaf	Root	Panicle
FPKM	0.3636085	1.07666	1.631182

Homologues

Genome & Annotation	Homologs	Type	Expression(FPKM)
Genome & Annotation	Homologs	Type	Leaf	Root	Panicle
Nipponbare \| IRGSP 1.0 \| Gramene(+IsoSeq)	OsNip_10g0102900	RBH	0.000000	0.000000	0.000000
Nipponbare \| IRGSP 1.0 \| MSU	LOC_Os10g01380	RBH	0.000000	0.000000	0.000000
Nipponbare \| IRGSP 1.0 \| RAP-db	Os10g0102900	RBH	None	None	None
Azucena \| AzucenaRS1 \| Gramene(+IsoSeq)	OsAzu_10g0000150	RBH	0.0	0.0	0.0
KETAN NANGKA \| Os128077RS1 \| Gramene(+IsoSeq)	OsKeNa_10g0000150	RBH	0.000000	0.000000	0.000000
CHAO MEO \| Os132278RS1 \| Gramene(+IsoSeq)	OsCMeo_10g0000140	RBH	0.0	0.0	0.000000
ARC 10497 \| Os117425RS1 \| Gramene(+IsoSeq)	OsARC_10g0000170	RBH	0.105779	0.117461	None
PR 106 \| Os127742RS1 \| Gramene(+IsoSeq)	OsPr106_10g0000130	RBH	0.000000	0.000000	0.000000
Minghui 63 \| MH63RS3 \| HZAU	OsMH63_10G0006400	RBH	0.0034345	0	0
IR 64 \| OsIR64RS1 \| Gramene(+IsoSeq)	OsIR64_10g0000150	RBH	0.0	0.0	0.0
Zhenshan 97 \| ZS97RS3 \| HZAU	OsZS97_07G0146100	RBH	4.7678275	10.331994	10.7107335
LIMA \| Os127564RS1 \| Gramene(+IsoSeq)	OsLima_10g0000140	RBH	0.0	0.0	None
KHAO YAI GUANG \| Os127518RS1 \| Gramene(+IsoSeq)	OsKYG_10g0000150	RBH	0.0	0.0	None
GOBOL SAIL \| Os132424RS1 \| Gramene(+IsoSeq)	OsGoSa_10g0000150	RBH	0.0	0.0	None
LIU XU \| Os125827RS1 \| Gramene(+IsoSeq)	OsLiXu_10g0000130	RBH	0.0	0.0	0.0
LARHA MUGAD \| Os125619RS1 \| Gramene(+IsoSeq)	OsLaMu_10g0000140	RBH	0.000000	0.0	None
N22 \| OsN22RS2 \| Gramene(+IsoSeq)	OsN22_10G000160	RBH	0.0	0.0	0.0
NATEL BORO \| Os127652RS1 \| Gramene(+IsoSeq)	OsNaBo_10g0000150	RBH	0.000000	0.000000	0.000000

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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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