Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsZS97_09G0242200 | OGI:01009580 | 16/16 | Zhenshan 97 | ZS97RS3 | HZAU | Chr09:14842398-14844300 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | TTATGCTTGAGCTGAACGATGACTTAGAATTTGATTCTTCACATTTTTATAGTACTCCTGCTCCTCGATGCTCATTGCACTAGTATCAGTCCTCAAAAGCTTATCTTCTTTTATCATTCTCTTGAACTCGAACTTGTCTCTCTCCAAATCAATCCGCTTTTGCTCAAGTGCAAAAGCGATTTGGTACCTCTCCTCAAACATTCGCTCCTTCTCCGCATCGGCCTCTTTCTTCTTATCCCATAGATAGTCTAAGGACTCTTTCCGTGATAGATCCGAGCGTTCGTACATCTGTTGTTTCGCCTTCTTCCTCCCCATGGGTCTTCCCTCACCTACTGTATTCTCAGGATCAGCAGCCCTATTCTCATCAACATTACATGCAGGAGTAGATATCGCAGGAGAATCATTGGCGGTCTTCTTCTGCTTCTTGCTTGAAGTTTTACTAGCTGCCAGCTGATTCCGCTTATCATTCCACTTTGGCAGATTCTTTAAAATGTTGTAGCAATGCATGAACTGAAACTTCTTTTCCTCTTTCTTCTTGTACATCAGGCTTGCTTGCACATGCTGCAAATAAATGAACTGAAGTCAGAAACATAAAGGAGACGATTGGAAAATAAGCAACACAAGCAATGTATTACCATGTCCTCATGATTGACACCACTCTGATTTCGATTCTGAATCTGACTTAAGAAACCACAATACTTATTGACATGTTCCTGTATAGTGGACCAACGATGTACAAGTGAACTTTGGGAGCGATCTGATTCGAATTCCTTGTTCTCATGAAAGTAGTCATGAATACGTCCCCAATATGTACCGTGAGATTGATCCATCCCTTGAACCGGATCGAAAGAAACATTTATCCACGCCGACACCAAAAGGTTGTCCTCCTCCAAACTGAAATTTTTTTATCTTTTTTGGTTCGGTCTCACAGCAACATTTTCATTCACAACTGGTTCTTGTTCATCATCATACTGGCTTCCTATCTCACTCGAGCCAAAATGGTTGCTCTCATCATTGATCAAGTTTGTGTAATATCGCTCTCGCTCCATATCATCTGTCCATAGATAAAAAATCATAACCTTGTACTTGAGAAAAAAAAAGACTAACAAAACACAAACAAGTGATAATTTCTGGACAAAAAATGCATTCTGTTATTTGAAAGTTCACATGTATTGGATGGTGACAACTTTGCGTACACATAATATTAATCAAAAGCTGTGCATTCGCATGGAGAGAGCACACAAATGTTGCTAATTTGGATACTGAAAATGACAAGGTTCATAGAAATGTTCCTATATCGATCCTGACAGCGACAAGGTTCAGATAACTGTTCAACAGGTCAAATTTCAGAGCATCGTATATGAAACTCAGTACATACTGAATTTCCATTGTGTCAAACTCAGAGCATAAATTTGATAGCATATTATACTCACTACACAGTGTCAAACTGAAATTCCAGCACAACACCACTGAGTATTCTTTCCTGCATGCTGTACATACCCTATATACTTCTGGACATAAATGCAGGATATACACCACAGTGAAGTACATCAGCACATACAGCAGACATACCCTTGTTCAAGTCAGGCAATTTTGCTACAATTGCAAGCATACACAAAAGAACATGATGAAAATTTCTGAAAATGCAACCTCTATCAGATAGTATAAATTAGACAATACTATCCAGATGGAAGAAAACAAAGAAAGCACAATTAAGAAAGCTTCAGATGTGAAGGAATTCAGAGCATGTAAACTAAACACTGAACAAATCAGGATTGGACTTACCGAAATTGCTCATGTGGAGGAATTCTTCGTCACCTACAGTCCATACTCTGGAGGAACTGCCGATAGAAGCTTCGTGTGAGAGGGGATCCAGTGGCTCGCTAGATGTCAGCTTCTCCAT
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| CDS seq | ATGGAGAAGCTGACATCTAGCGAGCCACTGGATCCCCTCTCACACGAAGCTTCTATCGGCAGTTCCTCCAGAGTATGGACTGTAGGTGACGAAGAATTCCTCCACATGAGCAATTTCGATGATATGGAGCGAGAGCGATATTACACAAACTTGATCAATGATGAGAGCAACCATTTTGGCTCGAGTGAGATAGGAAGCCAGTATGATGATGAACAAGAACCAGTTGTGAATGAAAATGTTGCTGAGGACAACCTTTTGGTGTCGGCGTGGATAAATGTTTCTTTCGATCCGGTTCAAGGGATGGATCAATCTCACGGTACATATTGGGGACGTATTCATGACTACTTTCATGAGAACAAGGAATTCGAATCAGATCGCTCCCAAAGTTCACTTGTACATCGTTGGTCCACTATACAGGAACATGTCAATAAGTATTGTGGTTTCTTAAGTCAGATTCAGAATCGAAATCAGAGTGGTGTCAATCATGAGGACATGCATGTGCAAGCAAGCCTGATGTACAAGAAGAAAGAGGAAAAGAAGTTTCAGTTCATGCATTGCTACAACATTTTAAAGAATCTGCCAAAGTGGAATGATAAGCGGAATCAGCTGGCAGCTAGTAAAACTTCAAGCAAGAAGCAGAAGAAGACCGCCAATGATTCTCCTGCGATATCTACTCCTGCATGTAATGTTGATGAGAATAGGGCTGCTGATCCTGAGAATACAGTAGGTGAGGGAAGACCCATGGGGAGGAAGAAGGCGAAACAACAGATGTACGAACGCTCGGATCTATCACGGAAAGAGTCCTTAGACTATCTATGGGATAAGAAGAAAGAGGCCGATGCGGAGAAGGAGCGAATGTTTGAGGAGAGGTACCAAATCGCTTTTGCACTTGAGCAAAAGCGGATTGATTTGGAGAGAGACAAGTTCGAGTTCAAGAGAATGATAAAAGAAGATAAGCTTTTGAGGACTGATACTAGTGCAATGAGCATCGAGGAGCAGGAGTACTATAAAAATGTGAAGAATCAAATTCTAAGTCATCGTTCAGCTCAAGCATAA
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| Protein seq | MEKLTSSEPLDPLSHEASIGSSSRVWTVGDEEFLHMSNFDDMERERYYTNLINDESNHFGSSEIGSQYDDEQEPVVNENVAEDNLLVSAWINVSFDPVQGMDQSHGTYWGRIHDYFHENKEFESDRSQSSLVHRWSTIQEHVNKYCGFLSQIQNRNQSGVNHEDMHVQASLMYKKKEEKKFQFMHCYNILKNLPKWNDKRNQLAASKTSSKKQKKTANDSPAISTPACNVDENRAADPENTVGEGRPMGRKKAKQQMYERSDLSRKESLDYLWDKKKEADAEKERMFEERYQIAFALEQKRIDLERDKFEFKRMIKEDKLLRTDTSAMSIEEQEYYKNVKNQILSHRSAQA |
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| Function | Glutathione S-transferase T3 [UniProtKB/Swiss-Prot:Q9FHE1] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsZS97_09G0242200 | OsZS97_09T0242200.1 | Chr09 | 14842398 | 14844300 | - | makerRMon | ||
| CDS seq | ATGGAGAAGCTGACATCTAGCGAGCCACTGGATCCCCTCTCACACGAAGCTTCTATCGGCAGTTCCTCCAGAGTATGGACTGTAGGTGACGAAGAATTCCTCCACATGAGCAATTTCGATGATATGGAGCGAGAGCGATATTACACAAACTTGATCAATGATGAGAGCAACCATTTTGGCTCGAGTGAGATAGGAAGCCAGTATGATGATGAACAAGAACCAGTTGTGAATGAAAATGTTGCTGAGGACAACCTTTTGGTGTCGGCGTGGATAAATGTTTCTTTCGATCCGGTTCAAGGGATGGATCAATCTCACGGTACATATTGGGGACGTATTCATGACTACTTTCATGAGAACAAGGAATTCGAATCAGATCGCTCCCAAAGTTCACTTGTACATCGTTGGTCCACTATACAGGAACATGTCAATAAGTATTGTGGTTTCTTAAGTCAGATTCAGAATCGAAATCAGAGTGGTGTCAATCATGAGGACATGCATGTGCAAGCAAGCCTGATGTACAAGAAGAAAGAGGAAAAGAAGTTTCAGTTCATGCATTGCTACAACATTTTAAAGAATCTGCCAAAGTGGAATGATAAGCGGAATCAGCTGGCAGCTAGTAAAACTTCAAGCAAGAAGCAGAAGAAGACCGCCAATGATTCTCCTGCGATATCTACTCCTGCATGTAATGTTGATGAGAATAGGGCTGCTGATCCTGAGAATACAGTAGGTGAGGGAAGACCCATGGGGAGGAAGAAGGCGAAACAACAGATGTACGAACGCTCGGATCTATCACGGAAAGAGTCCTTAGACTATCTATGGGATAAGAAGAAAGAGGCCGATGCGGAGAAGGAGCGAATGTTTGAGGAGAGGTACCAAATCGCTTTTGCACTTGAGCAAAAGCGGATTGATTTGGAGAGAGACAAGTTCGAGTTCAAGAGAATGATAAAAGAAGATAAGCTTTTGAGGACTGATACTAGTGCAATGAGCATCGAGGAGCAGGAGTACTATAAAAATGTGAAGAATCAAATTCTAAGTCATCGTTCAGCTCAAGCATAA
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| Protein seq | MEKLTSSEPLDPLSHEASIGSSSRVWTVGDEEFLHMSNFDDMERERYYTNLINDESNHFGSSEIGSQYDDEQEPVVNENVAEDNLLVSAWINVSFDPVQGMDQSHGTYWGRIHDYFHENKEFESDRSQSSLVHRWSTIQEHVNKYCGFLSQIQNRNQSGVNHEDMHVQASLMYKKKEEKKFQFMHCYNILKNLPKWNDKRNQLAASKTSSKKQKKTANDSPAISTPACNVDENRAADPENTVGEGRPMGRKKAKQQMYERSDLSRKESLDYLWDKKKEADAEKERMFEERYQIAFALEQKRIDLERDKFEFKRMIKEDKLLRTDTSAMSIEEQEYYKNVKNQILSHRSAQA
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0 | 0 | 0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_12g0543800 | SBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os09g25660 | SBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os12g0543800 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_12g0016380 | SBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_12g0016500 | SBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_12g0016840 | SBH | 0.0 | 0.0 | 0.010541 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_12g0015720 | SBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_09G0195300 | SBH | 0 | 0 | 0 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_12g0015760 | SBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_01G0309100 | RBH | 0.0081325 | 0 | 0.0082165 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_12g0015940 | SBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_09g0010440 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_12g0016150 | SBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_12g0016130 | SBH | 0.0 | 0.0 | 0.000000 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_12g0016390 | SBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_09G010930 | RBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_12g0015880 | SBH | 0.0 | 0.0 | 0.0 |
