Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsZS97_09G0129500 | OGI:09024330 | 16/16 | Zhenshan 97 | ZS97RS3 | HZAU | Chr09:7829694-7831953 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | CACTGCAGATGGGTGCTCATCTAGTGGAAACAAACTGTTGCCGAGAAAGGGTCTGGAGATATGCAATGCACGGTTCTGAAACCATAGATATAAATATACGTGTAATGTGTTAAGTTTGCTGCATTAATTCCAGACAATGAAACACATATGCTACTCGAAGGAAACATGACTGATTAACGGTACGTATGGGGGAGCCAACAGGTATGCACAAATATTCTATATTGATTTGTCCTTTTTCGTTTAGTTTGGCACATATATATTACTGTCTCTAGCACTCGTTTATTTATGGATTACCTTAAATTTTCTCACCTCCATCACATTCAAATTAATGAATTTCTGTGCTAGATGGCCAAAACAAATTCTGCGTACATGTGGTATGCAATTTTATGAGTTTTACTTACTGCATCTATATATGCAGGTTTTTCTTCGTATTTAACTTACTTTCATAAAAAAAATAACAATCTTGAATTGGTGAAACGGCCGAATGATTTCATGTGCTGCCACACTAATATATCAGTTGTCATTTGAATAACAAATTCTGAATGTTTCACCCTATGCATGATACATGCAATTAATTAACCAAGAAAATTTTCAGGGAGCTGCAGTATAGACATCCAACGTCTCGCCGCCGATCTCGAGACAAAGCTATGCAATGTGGATTTGGACGGCGGCCGGCGATGGCGCCGCTCGCCGGAGTGCCTCATTTCCAAGGTGAAGCCGCAGGTCCGCCGCGTCGACGACTCGCAGTACACCCCGCAGGTGGTGCTCGTCGGCGCCTACCACCACAAACCGCTGGACAGCACGGACCAGCTGGCGAAGTGGACGGCACTCCGCCGTGTCCTCCCCGACGACGGCGAGCAGCGGGCGTCCACGCTGAGGCGGTGCCTGGAGGCCATCGCCGGCGTTGAGGACGAAGCGAGGAGCTACTACGAAGACGGCGCCAAGACATGGAGGGAGAATCAGATGTTCGTGCAGATGCTGTTGCTCGACGCGTGGTTCGTCCTCGACATCTTCAACGTCGGCGGCGAGGCGGCTGCGGCGGTGGGTAGCCGCGGCGGGAGCGTGGTGGACTACATCTTCGCCGTGCGCGACGTGTTCTACCTGCTCGAGAACCAGATACCCTTCTTCATCCTCGAGAAGGTCTACGAGCTGGTGCGTGTCGGAAATTCCGGCCAGGATCAAGATCAACGCACGCAAACGTGTACTTCTCCTCCGCCTCCTCAGCCTCCGGGAGCTACAGCCATCGCCGGCGGCGGCCCGTCGTCCTCCTCCACCGTTGTTGTGGATGGATTCTTGCGCCATCTCCGGTCGCTGCTCCAGGACCAGGGCTACTCGAATGTGGAGGTGGACATCACCAGCACACGCCCCTGTCACCTCGTCCACTTACTCCACATGCACTTCACACCCATGGCGATGTCGCCGGCCGACGACACCGACGACGCTGCCGCTGTCCCCAACAGGCGCGCGCGCGCCACCGTTTACCGGTGGCGCGGGGCGACGCAGTACCACGCCGCCGGCGTGAGGTTCAAGAAACGGCCCCTCGGCGCCGCCGCCGGCGACGCGCGGTGCGTCCTCGACGTGGAGCTCCGGCGGCTGACGACGCTGCACGTCCCGACGCTGACGGTGGACAACAACACGTGGCGGGTCCTGCGCAACCTGATGGCGCTGGAGCAGAACAACCCACACCTGGGCAGCCACGTCACGGCCTACTGCCTCTTCGTGTCGCAGCTCGCCGGCACGGCGAGCGACGTCGCGCTCCTGGCGAGGAAAGGCGTGGTCGTGCACTTCATGGCCACCGACGAGGACGTCGCCGACGGGTTCGCCGGCCTGTGCAGGGGCGTGGCGCTCGACGTCGACGACGCGCGCCGGAACTACCTGCAGCCGACGTGGGAGAGGATGGAGCGGTGGTACAGCAGCCGGCCGGTCAACTGGATGGCGCTGCTGCGGCGGCGGCATTTGAGCAACCCGCTGGTGGCGATCGCGCTGCTCGCCGCCATTACTGGCCTAGTCTGTGAAGTTGTGCAGGCCGTATATGCGGTCAAGACCTACAGGCCTACAATCTAGCTAGGCCACTGAGCCATATGCCTACCAACTTTGCGTAGCCTATCAAGTAACAAGTATTCCATGACGTTGTTGATTTTTTGACGTTTTATTCAAAAATTTTTGTGCAAATATAAAAATATTTATGTCATGCTTAAAGAATATTTGATGACGAATCAAGTCACAATAAAATAAATGATAATTGCTTAAATTTTTTAAA
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| CDS seq | ATGGGGGAGCCAACAGGGAGCTGCAGTATAGACATCCAACGTCTCGCCGCCGATCTCGAGACAAAGCTATGCAATGTGGATTTGGACGGCGGCCGGCGATGGCGCCGCTCGCCGGAGTGCCTCATTTCCAAGGTGAAGCCGCAGGTCCGCCGCGTCGACGACTCGCAGTACACCCCGCAGGTGGTGCTCGTCGGCGCCTACCACCACAAACCGCTGGACAGCACGGACCAGCTGGCGAAGTGGACGGCACTCCGCCGTGTCCTCCCCGACGACGGCGAGCAGCGGGCGTCCACGCTGAGGCGGTGCCTGGAGGCCATCGCCGGCGTTGAGGACGAAGCGAGGAGCTACTACGAAGACGGCGCCAAGACATGGAGGGAGAATCAGATGTTCGTGCAGATGCTGTTGCTCGACGCGTGGTTCGTCCTCGACATCTTCAACGTCGGCGGCGAGGCGGCTGCGGCGGTGGGTAGCCGCGGCGGGAGCGTGGTGGACTACATCTTCGCCGTGCGCGACGTGTTCTACCTGCTCGAGAACCAGATACCCTTCTTCATCCTCGAGAAGGTCTACGAGCTGGTGCGTGTCGGAAATTCCGGCCAGGATCAAGATCAACGCACGCAAACGTGTACTTCTCCTCCGCCTCCTCAGCCTCCGGGAGCTACAGCCATCGCCGGCGGCGGCCCGTCGTCCTCCTCCACCGTTGTTGTGGATGGATTCTTGCGCCATCTCCGGTCGCTGCTCCAGGACCAGGGCTACTCGAATGTGGAGGTGGACATCACCAGCACACGCCCCTGTCACCTCGTCCACTTACTCCACATGCACTTCACACCCATGGCGATGTCGCCGGCCGACGACACCGACGACGCTGCCGCTGTCCCCAACAGGCGCGCGCGCGCCACCGTTTACCGGTGGCGCGGGGCGACGCAGTACCACGCCGCCGGCGTGAGGTTCAAGAAACGGCCCCTCGGCGCCGCCGCCGGCGACGCGCGGTGCGTCCTCGACGTGGAGCTCCGGCGGCTGACGACGCTGCACGTCCCGACGCTGACGGTGGACAACAACACGTGGCGGGTCCTGCGCAACCTGATGGCGCTGGAGCAGAACAACCCACACCTGGGCAGCCACGTCACGGCCTACTGCCTCTTCGTGTCGCAGCTCGCCGGCACGGCGAGCGACGTCGCGCTCCTGGCGAGGAAAGGCGTGGTCGTGCACTTCATGGCCACCGACGAGGACGTCGCCGACGGGTTCGCCGGCCTGTGCAGGGGCGTGGCGCTCGACGTCGACGACGCGCGCCGGAACTACCTGCAGCCGACGTGGGAGAGGATGGAGCGGTGGTACAGCAGCCGGCCGGTCAACTGGATGGCGCTGCTGCGGCGGCGGCATTTGAGCAACCCGCTGGTGGCGATCGCGCTGCTCGCCGCCATTACTGGCCTAGTCTGTGAAGTTGTGCAGGCCGTATATGCGGTCAAGACCTACAGGCCTACAATCTAG
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| Protein seq | MGEPTGSCSIDIQRLAADLETKLCNVDLDGGRRWRRSPECLISKVKPQVRRVDDSQYTPQVVLVGAYHHKPLDSTDQLAKWTALRRVLPDDGEQRASTLRRCLEAIAGVEDEARSYYEDGAKTWRENQMFVQMLLLDAWFVLDIFNVGGEAAAAVGSRGGSVVDYIFAVRDVFYLLENQIPFFILEKVYELVRVGNSGQDQDQRTQTCTSPPPPQPPGATAIAGGGPSSSSTVVVDGFLRHLRSLLQDQGYSNVEVDITSTRPCHLVHLLHMHFTPMAMSPADDTDDAAAVPNRRARATVYRWRGATQYHAAGVRFKKRPLGAAAGDARCVLDVELRRLTTLHVPTLTVDNNTWRVLRNLMALEQNNPHLGSHVTAYCLFVSQLAGTASDVALLARKGVVVHFMATDEDVADGFAGLCRGVALDVDDARRNYLQPTWERMERWYSSRPVNWMALLRRRHLSNPLVAIALLAAITGLVCEVVQAVYAVKTYRPTI |
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| Function | - | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsZS97_09G0129500 | OsZS97_09T0129500.1 | Chr09 | 7829694 | 7831953 | + | makerRMon | ||
| CDS seq | ATGGGGGAGCCAACAGGGAGCTGCAGTATAGACATCCAACGTCTCGCCGCCGATCTCGAGACAAAGCTATGCAATGTGGATTTGGACGGCGGCCGGCGATGGCGCCGCTCGCCGGAGTGCCTCATTTCCAAGGTGAAGCCGCAGGTCCGCCGCGTCGACGACTCGCAGTACACCCCGCAGGTGGTGCTCGTCGGCGCCTACCACCACAAACCGCTGGACAGCACGGACCAGCTGGCGAAGTGGACGGCACTCCGCCGTGTCCTCCCCGACGACGGCGAGCAGCGGGCGTCCACGCTGAGGCGGTGCCTGGAGGCCATCGCCGGCGTTGAGGACGAAGCGAGGAGCTACTACGAAGACGGCGCCAAGACATGGAGGGAGAATCAGATGTTCGTGCAGATGCTGTTGCTCGACGCGTGGTTCGTCCTCGACATCTTCAACGTCGGCGGCGAGGCGGCTGCGGCGGTGGGTAGCCGCGGCGGGAGCGTGGTGGACTACATCTTCGCCGTGCGCGACGTGTTCTACCTGCTCGAGAACCAGATACCCTTCTTCATCCTCGAGAAGGTCTACGAGCTGGTGCGTGTCGGAAATTCCGGCCAGGATCAAGATCAACGCACGCAAACGTGTACTTCTCCTCCGCCTCCTCAGCCTCCGGGAGCTACAGCCATCGCCGGCGGCGGCCCGTCGTCCTCCTCCACCGTTGTTGTGGATGGATTCTTGCGCCATCTCCGGTCGCTGCTCCAGGACCAGGGCTACTCGAATGTGGAGGTGGACATCACCAGCACACGCCCCTGTCACCTCGTCCACTTACTCCACATGCACTTCACACCCATGGCGATGTCGCCGGCCGACGACACCGACGACGCTGCCGCTGTCCCCAACAGGCGCGCGCGCGCCACCGTTTACCGGTGGCGCGGGGCGACGCAGTACCACGCCGCCGGCGTGAGGTTCAAGAAACGGCCCCTCGGCGCCGCCGCCGGCGACGCGCGGTGCGTCCTCGACGTGGAGCTCCGGCGGCTGACGACGCTGCACGTCCCGACGCTGACGGTGGACAACAACACGTGGCGGGTCCTGCGCAACCTGATGGCGCTGGAGCAGAACAACCCACACCTGGGCAGCCACGTCACGGCCTACTGCCTCTTCGTGTCGCAGCTCGCCGGCACGGCGAGCGACGTCGCGCTCCTGGCGAGGAAAGGCGTGGTCGTGCACTTCATGGCCACCGACGAGGACGTCGCCGACGGGTTCGCCGGCCTGTGCAGGGGCGTGGCGCTCGACGTCGACGACGCGCGCCGGAACTACCTGCAGCCGACGTGGGAGAGGATGGAGCGGTGGTACAGCAGCCGGCCGGTCAACTGGATGGCGCTGCTGCGGCGGCGGCATTTGAGCAACCCGCTGGTGGCGATCGCGCTGCTCGCCGCCATTACTGGCCTAGTCTGTGAAGTTGTGCAGGCCGTATATGCGGTCAAGACCTACAGGCCTACAATCTAG
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| Protein seq | MGEPTGSCSIDIQRLAADLETKLCNVDLDGGRRWRRSPECLISKVKPQVRRVDDSQYTPQVVLVGAYHHKPLDSTDQLAKWTALRRVLPDDGEQRASTLRRCLEAIAGVEDEARSYYEDGAKTWRENQMFVQMLLLDAWFVLDIFNVGGEAAAAVGSRGGSVVDYIFAVRDVFYLLENQIPFFILEKVYELVRVGNSGQDQDQRTQTCTSPPPPQPPGATAIAGGGPSSSSTVVVDGFLRHLRSLLQDQGYSNVEVDITSTRPCHLVHLLHMHFTPMAMSPADDTDDAAAVPNRRARATVYRWRGATQYHAAGVRFKKRPLGAAAGDARCVLDVELRRLTTLHVPTLTVDNNTWRVLRNLMALEQNNPHLGSHVTAYCLFVSQLAGTASDVALLARKGVVVHFMATDEDVADGFAGLCRGVALDVDDARRNYLQPTWERMERWYSSRPVNWMALLRRRHLSNPLVAIALLAAITGLVCEVVQAVYAVKTYRPTI
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.7123875 | 0.441969 | 0.87729 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_09g0304500 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os09g13410 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os09g0304500 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_09g0004850 | RBH | 0.0 | 1.657262 | 1.245987 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_09g0004870 | RBH | 0.0 | 0.0 | 0.110735 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_09g0005060 | RBH | 0.0 | 1.483338 | 0.879577 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_09g0004750 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_09g0004960 | RBH | 0.000000 | 0.0 | 0.000000 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_09G0141800 | RBH | 1.412697 | 1.711202 | 0.086189 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_09g0005110 | RBH | 0.0 | 0.087494 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | NA | NA | NA | NA | NA |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_09g0005090 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_09g0004980 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_09g0004970 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_09g0004840 | RBH | 0.0 | 0.0 | 0.000000 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_09g0004900 | RBH | 0.0 | 1.441896 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_09G005180 | RBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_09g0004950 | RBH | 0.301936 | 0.000000 | 1.735457 |
