Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsZS97_08G0300700 | OGI:08051990 | 16/16 | Zhenshan 97 | ZS97RS3 | HZAU | Chr08:19223833-19224946 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | GCACAGATGCGAGTGAGATCACACCCTCAACCTACACTAGCCATGGCCGCAGCAAACAAGATTCCCCTGCTGCTCGCCGCCGCTGCCGCCCTCTCGCTCGCCGCGAGCGCCGTGGCGGCGGCGCCCGGCCCGCGCCGCCGGCCGGTGCGCATGCGGCTGTACATGCACGACGTGATCGGCGGGCCGGGGCAGACGGCGATCCGCCTCATCTGGGGCGCGGGGCCGCCCCACGCGTCCATGCCGGGGCGGGCGTTCGGCGACACGGTGGCCGTGGACGACCTCGTCACGGAGGGCCCGAGCATCGCCTCCGCCGCCGTCGGCCGCGCGCAGGGCACGTACATGCTCAGCTCCCAGCGCGAGGCGGTGCTGGTGGTTGCCATCACCGTGGCGCTCACCTCGGCCGGGGGCCCCTACAACGGGAGCAACCTCGTCATCGCCGGGCGCGACAGGGTGCGCGACGAGACGAGGGAGCTCGCGGTGGTCGGCGGCACCGGCGCGCTCCGGGGCGCCGCCGGGTACGTGCTGTGGAGGACGGCCAAGGTGTGGTCGGAGATCCACATGGCGCTGGAGCTCGACGTGCACGCGTCCGTGCCGGCGACGGCAGACGACGACGCGGTAGCCACCGAGTAAGAGAGATTATTGTACTCCTACGTGGATCGTTTGATTCCGCCATGGATATCTATCCGGCCGGGAGCTCCCGTGCACTGCAGCTAGATTATACTCGTATTTATTTGTTGTGCTTTTAACTTTTTGTTTCCTTACAAGAAATAAAAAGAGGCTATGATCCTCTGATCATTACTATTAATCACACTACGAGTGACAAACTCGGAACAAGAATTATCGAAGCTCCTAACCATATTAATTATTTAATTATTATCAATTGAAATTTAAAATAGTATAACATAAATTAGGTAGAATTATATAATTTACCCGTAGTCATAGGGCCACGGGATATTTGGCTGAACTAGAAAGTTAGGGTGTATTTGGTTCGTTGGGTGTAAAGTTTTTAAAGTATACGGACGCACATTTAAAGTATTAAACATAAACCAATAACAAAACAAATTATATATTCCACCTGTAAACTGCGAGACGAATTTATTAAGCCTAATTAATC
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| CDS seq | ATGCGAGTGAGATCACACCCTCAACCTACACTAGCCATGGCCGCAGCAAACAAGATTCCCCTGCTGCTCGCCGCCGCTGCCGCCCTCTCGCTCGCCGCGAGCGCCGTGGCGGCGGCGCCCGGCCCGCGCCGCCGGCCGGTGCGCATGCGGCTGTACATGCACGACGTGATCGGCGGGCCGGGGCAGACGGCGATCCGCCTCATCTGGGGCGCGGGGCCGCCCCACGCGTCCATGCCGGGGCGGGCGTTCGGCGACACGGTGGCCGTGGACGACCTCGTCACGGAGGGCCCGAGCATCGCCTCCGCCGCCGTCGGCCGCGCGCAGGGCACGTACATGCTCAGCTCCCAGCGCGAGGCGGTGCTGGTGGTTGCCATCACCGTGGCGCTCACCTCGGCCGGGGGCCCCTACAACGGGAGCAACCTCGTCATCGCCGGGCGCGACAGGGTGCGCGACGAGACGAGGGAGCTCGCGGTGGTCGGCGGCACCGGCGCGCTCCGGGGCGCCGCCGGGTACGTGCTGTGGAGGACGGCCAAGGTGTGGTCGGAGATCCACATGGCGCTGGAGCTCGACGTGCACGCGTCCGTGCCGGCGACGGCAGACGACGACGCGGTAGCCACCGAGTAA
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| Protein seq | MRVRSHPQPTLAMAAANKIPLLLAAAAALSLAASAVAAAPGPRRRPVRMRLYMHDVIGGPGQTAIRLIWGAGPPHASMPGRAFGDTVAVDDLVTEGPSIASAAVGRAQGTYMLSSQREAVLVVAITVALTSAGGPYNGSNLVIAGRDRVRDETRELAVVGGTGALRGAAGYVLWRTAKVWSEIHMALELDVHASVPATADDDAVATE |
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| Function | Pterocarpan synthase 1 [UniProtKB/Swiss-Prot:A0A1V1FH01] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsZS97_08G0300700 | OsZS97_08T0300700.1 | Chr08 | 19223833 | 19224946 | + | makerRMon | ||
| CDS seq | ATGCGAGTGAGATCACACCCTCAACCTACACTAGCCATGGCCGCAGCAAACAAGATTCCCCTGCTGCTCGCCGCCGCTGCCGCCCTCTCGCTCGCCGCGAGCGCCGTGGCGGCGGCGCCCGGCCCGCGCCGCCGGCCGGTGCGCATGCGGCTGTACATGCACGACGTGATCGGCGGGCCGGGGCAGACGGCGATCCGCCTCATCTGGGGCGCGGGGCCGCCCCACGCGTCCATGCCGGGGCGGGCGTTCGGCGACACGGTGGCCGTGGACGACCTCGTCACGGAGGGCCCGAGCATCGCCTCCGCCGCCGTCGGCCGCGCGCAGGGCACGTACATGCTCAGCTCCCAGCGCGAGGCGGTGCTGGTGGTTGCCATCACCGTGGCGCTCACCTCGGCCGGGGGCCCCTACAACGGGAGCAACCTCGTCATCGCCGGGCGCGACAGGGTGCGCGACGAGACGAGGGAGCTCGCGGTGGTCGGCGGCACCGGCGCGCTCCGGGGCGCCGCCGGGTACGTGCTGTGGAGGACGGCCAAGGTGTGGTCGGAGATCCACATGGCGCTGGAGCTCGACGTGCACGCGTCCGTGCCGGCGACGGCAGACGACGACGCGGTAGCCACCGAGTAA
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| Protein seq | MRVRSHPQPTLAMAAANKIPLLLAAAAALSLAASAVAAAPGPRRRPVRMRLYMHDVIGGPGQTAIRLIWGAGPPHASMPGRAFGDTVAVDDLVTEGPSIASAAVGRAQGTYMLSSQREAVLVVAITVALTSAGGPYNGSNLVIAGRDRVRDETRELAVVGGTGALRGAAGYVLWRTAKVWSEIHMALELDVHASVPATADDDAVATE
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 5.9437985 | 0.030559 | 0.068611 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_08g0375400 | RBH | 0.0 | 0.0 | 3.710023 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os08g28790 | RBH | 0.0 | 0.0 | 0.952653 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os08g0375400 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_08g0014150 | RBH | 0.0 | 0.0 | 1.166990 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_08g0014050 | RBH | 0.0 | 0.0 | 3.300631 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_08g0014030 | RBH | 0.0 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_08g0014270 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_08g0014050 | RBH | 1.388378 | 0.0 | 2.969559 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_08G0277900 | RBH | 6.1007905 | 0.040991 | 0.5244875 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_08g0014100 | RBH | 0.0 | 0.0 | 0.286858 |
| Zhenshan 97 | ZS97RS3 | HZAU | NA | NA | NA | NA | NA |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_08g0013610 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_08g0013660 | RBH | 0.241911 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_08g0013560 | RBH | 0.0 | 8.346599 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_08g0014350 | RBH | 0.0 | 0.0 | 0.150637 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_08g0013710 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_08G013700 | RBH | 0.0 | 0.0 | 2.050756 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_08g0013870 | RBH | 0.0 | 0.0 | 0.0 |
