Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsZS97_08G0292500 | OGI:08071080 | 16/16 | Zhenshan 97 | ZS97RS3 | HZAU | Chr08:18634050-18638858 | ||||||||
| Gene Symbol | RLCK254, OsRLCK254, - | ||||||||||
| DNA seq | TTAGTCCCGGATTGGTACTCCCGGTTTGGAAACCGGGACTAAAGGGGGGTTACGAACCGGGACTACAAAGGGTTTCTCCACCAGTGTCAAGACAGTCGCAGTCATATCCTCCTGGTTTGTTCTTACAATTGCCGTAACACGGGTAGATATCAGGAGAACTACACTCATCGATACCTATAAATAAAAATTGGAACTGGTCAAGCAGATATGAAGAAGCCAGAAAACAGAATTATGATTAGAACTCACTGATTTTCTGCCTAATACATATGAATAAAACTCCATATTTGTTAATTATGAATTTCAGAATTGCTTATCATTAAGAGTAACAAAATTTGAACACCAGTCCAAGCGCTGCTTTGCATTTGCGGACTATTTATTTAACCGAGGAAAAACTAGAAATTTGTGAATTTGTATACACTATAATGTAAAATATTAAACCAATAACTTATATATCAACAAATTAAGAAATGTCTTATGATGAATACAATATGTGACACAAAAGCTAATTGCATATTTGCGATTACTAGTTTTGGAACTATTGATAAACCTAGGTCAATTTTTTTGAGCTTCAAAACTTTTACGTCGGTAATTATAAATTTAGTAATTGAATTTATATTAATGCATTTATCAAAAACAAATAAAATTACTTGGCAGTTGGTTACCACTACTACAAAAGTGATTTTTCTGTACGAGGCCCCTTGATTTTTGCAAACAGACCATAACTAGTGGCGTCTGTAAAAATCGAGGGTCATTTTTGCATGCGGCCCCTTATGTGGCCCGTATGGAAAAATCAATTTTCCCATACGGGCCTCTTAAGACGGCCGCATGCAAAAATGAGCGGCTCACTTAAGCGCCCGTATGGGAAAATCGATTTTTCTATACGGGCCACTTAAGGAGGCGTATGAAAAAATAAAATTTGAAAAATTTGAAACTAGTGTATCTCACTCATATGCACTCCAAATTAGATGATTCTTTTTTCTAAATGTTTCTAAAATCGTCCTCTATCATGTTATTGTGTTCTTACTGCTATTATTTTGGCCATTTTTTCTTGTGACTTTATTTTATCAATTAAAACTTTGAATTTCAAAACTTCAAATAATATTTTGAAGCAGTAATTGATTTCAGCTGAAAAAGTCATCAACAACAAAGTTGTATAACACATCAAGATATATAACTTCTATTTTGGTCATTTCTTCATCCGACAAAGATTTTTGTAAGATTGATCACAAAATGTACATCTCTCTTATAGTTTTATAAACTATATATAAGAGATATGTACATTTTATGAACAATCTTACAAATAACTTTGTCGGATGAAAAAATGACCAAAATAAAAGTTATAGATCTTGATGATTTATACAACTTTGTTATTGATGACTTTTTCAGTTGAAATCAATTAGTATTTTAAAATGCTGTTTGATGTTGTTATAATTTTAAATTCAAATTCAAATTGTTCAAACAAAGTCATATAGAAAAATGACCAAAACAAAAGTTATAGATCTTGATAAGTTATACAACTTTGTTGTTCACAAATTTTCCATTTGAAATCATTTATTGATTCAAAATATTATTTGAATTTCTTATATTTTAAAATTCAAATTTTATATAGCTCAATCAAACTTGGATGGAGAAATGACCAAAAGAAAATTGGTAGATTTCAATGATCTCTACAACTTTGTTTTTGACAACCTTTTCACATTAGTTCATTTAATACCACAAAATTAGATTTAATGTTCATTTTTATCTAGAAGTCTGATTTGCCTCCTCTCCCTCTCCACCACTTCAAAATTTCAGCAACCTTATCTCCAACCTTATCTTCTCTTATCTCCTCTCCACCATTACTTCTCCTCAACTCCCTCCCCCCTCTCTCTCTCTCCCCCTCACACACAGCAAGACAGGCGGGCGTCGGCGACACCGAGGAGGCACGTGGTGGCGGCGGCTGAGGGCGGCGCGGCGCGAGGCGGCGGCGGCAAGGAGGCACGCGGGGGCGGCGGCCGAGGGCAGCACGGCGCGAGGCGGCGGCACGCGGCGGCGGCCGAGTGTGGCACGCAGTGGCACGCGGCGGCGGTCGGCGGGAGCGACCGCCTGCGTGGATCTGCCTCCTCTACCACCCTTCGTCGTCGCCGGCGACTCCCTCGCCCTCCTCCAACGTGGATCCGGCGGCGGCGCCCACCCCCGCGGCGACGACGACCTCGGGCGGTGGCGCCACCGCCATCCCCTCCTCACCGCCCCTCCCCCCTCCTTACCGCCGCGGCGGCGGGGGCGGCTCTGCCGCCTCGAGCGGATCCAGCGCCAAGGGCGGCGGGGGCGGCCGATCCGGTGCCGGCGACGACGGCAGGCGGCGGGGGCGACGGATCCAGAGCCGGCGACGACGGCGGGCGGTGGGGGAGACGGATCTAGTGCCGGCGACGATGGCGGGCGGCGTGAGCGATGGATCCGGTGCCGGCGACGATGGCGGGCGGCGTGGGCGACGGATCCGACGCCGGCGGGCGGCGGGGGCGATGAATCTGGCACCGTGCGGCGGCGGGCTAGGGTTTGGGATATTTTGGATTTTTATTTTTTTTGTTTGCTGAATTTATTTTCGCATGCGGCTGGTATAAGCAACCGCATGCGAAAATGGGATTTTTGCATGAGGTTGGGCCGGCCGCATGCGAAAAGGGTGATTTTTGCAGACCTTTTCTCCCATGCGGTTGCCCCAACAGCATGCAAAGATGCCTTTTGCCCATATGGAAAAAGCCTTTTTGTACTAGTGTACCTTTTTCCCAATTAAAATTTACATTGTGCATACAAATTAATAATACAAGTTATGCAAAACATATGCATGCAGTAATAATGAATGATGACCATCGTCTTCCTATGCTCGTGTATTCACAAGGAGTGGCTAGGTTAAGGTAGATGGGCATATGATCCATGGGTTGGATACTGGATTGATGTTTTTCAAGACCTTAGTTAGTTAGCTGCTTTTTTTAACCCAGTGATCTATAGTACTATATACATGGTACATACACACATACTACATATAATTGATTTTGTCAACAGTATTTGGTGGTACAACTGTACCCCCAAGTCCCAAGGTGCGTCCGCCACTGAATGATGCGTGAAGGTCAAAACGTGTACACGTACTGTGTGTCAAAAAAAATCAACTTTTAAGGATTTATTTGGACAAACATTCACAGCGTCTCGAACCGTCCCTAGAATTTTTTTTTTTAAACGGGAGGAGTACAAACCTACTTTGGTTGTGTTCGGGAGGGAAGGTTGGGAACCCCTCCTCTCCGACACGTAAAATGATATATGCATTAATGTATGCATTAACGTATGATTAATTTAATTTTTATTAGCTCCCACCGTTTCATTTTATAAGTCGTTTGACTTTTCCTCTACTTAAACTTTGTTAAGTTTGACCAAATTTATAAAAAAAATTAACATCTAAATATCAAATTAGTTTTATTGAATCAAACATTGAATACATTTTGATAATAGAGCAATTTTACGGTCCTTGAGAAGGTACCATAAGATACCACTTTTTTTATTGTAAATTTAGTACCTCTTGGTATCATGAGTTACTAAAAATTTAGTGTAAAATTTGGTACCTTATGGTACCTCCTCAATAACTATAGAATTGCTCTTGATAATATGTTTGTTTTATGTTGAAAATACTACTACATTTTTCTATCAATTTAGTTAAATTTAAAGAAGTTTAACAAGAAAAAAAGTCAAACGACTTACAATATGAAACGAAGAGAATATTTTTTTAAAAAATAGATTAATATAATTTTCTAAAACAAGTTACGTATAGAAAATTTTTCAAAGAAAACACACCGTTTAACAATTTAAAAGACGTGTGTGCGAAAAACTTGAGAGATTAGTTGGGTAAAAGAAGAAAATGACTTAGCCTTACCATAGCATCCATCGATAATGTACGGATTGCCTTGATAACCATGGGAGCACTCGCAGCGATGCCCCTGATGCGCATTAGCAACGGAGTCTCGGCAAGAGCTGTGGGCACTGCGACATTCAGGGGCAGATGCGTTCCGGGGACATGTACTCGTCGAGTTACTGATGATCCAGTCCAGCGACGCTGAAAGCCCTCGAGGATGTTTACCGCAGAAGACATCCATAGAGAAATTGAATCCCTCATCAATCATGTAGACATAGAATGGGAAGGTGCGCCCCCTCCAGCACCTTCATCTGGATGAGATAGGATGGATATCCCAACATGATGTTTGTCTGGCAACAGCCAATGCCCGAGCAAACATCGTCGTCGGCTGCGCCGATCGTCAAGTTATCGGAGGTCGACGGCGGGCAGATCGCGGTGCAGGAGCCGACCACCGTCTGGTTCCGGCGATCAGCGGCGGCGGCCGGAACCATCACGTCGACCTGCGCGTTGCAGCCTAACAACGCCAGGAGGCTCTTGGACTCCGAGAGGAAGTAGGGCCCGGTGTTCGATAGCCCCTTGCCCCACCACGCCACATCCTTGCTTCGGTCGTCGTCGTAGAGGGTTATGACGCTGCTGTTGATGCGCACCGTGGCGTTGGGGATGGAGATGCCGAGCACCTGCACCGTGCCGTCGCCGAGGAACAGCCTCGGCGGGTGGTAGGATTGGTTGCAGGTGAGGTTGAAGCCTGGGTGGTAGCACCCGGCCTGAACGCCGAACGGGTACTCCAACTCAATGTCGCCGCAGCGCCTGCTGCAGTTGTTCTTCGCCGCCGCCGCCGCCAGCAGCTGCAGCTGGAGGGCTACTACTGCTACTGCTACAGCCGCCGCCGTGACAAATCTCCTGCGGCTTACTACTACCGTCGTTACATCCAT
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| CDS seq | ATGGATGTAACGACGGTAGTAGTAAGCCGCAGGAGATTTGTCACGGCGGCGGCTGTAGCAGTAGCAGTAGTAGCCCTCCAGCTGCAGCTGCTGGCGGCGGCGGCGGCGAAGAACAACTGCAGCAGGCGCTGCGGCGACATTGAGTTGGAGTACCCGTTCGGCGTTCAGGCCGGGTGCTACCACCCAGGCTTCAACCTCACCTGCAACCAATCCTACCACCCGCCGAGGCTGTTCCTCGGCGACGGCACGGTGCAGGTGCTCGGCATCTCCATCCCCAACGCCACGGTGCGCATCAACAGCAGCGTCATAACCCTCTACGACGACGACCGAAGCAAGGATGTGGCGTGGTGGGGCAAGGGGCTATCGAACACCGGGCCCTACTTCCTCTCGGAGTCCAAGAGCCTCCTGGCGTTGTTAGGCTGCAACGCGCAGGTCGACGTGATGGTTCCGGCCGCCGCCGCTGATCGCCGGAACCAGACGGTGGTCGGCTCCTGCACCGCGATCTGCCCGCCGTCGACCTCCGATAACTTGACGATCGGCGCAGCCGACGACGATGTTTGCTCGGGCATTGGCTGTTGCCAGACAAACATCATGTTGGGATATCCATCCTATCTCATCCAGATGAAGGGCTTTCAGCGTCGCTGGACTGGATCATCAGTAACTCGACGAGTACATGTCCCCGGAACGCATCTGCCCCTGAATGTCGCAGTGCCCACAGCTCTTGCCGAGACTCCGTTGCTAATGCGCATCAGGGGCATCGCTGCGAGTGCTCCCATGGTTATCAAGGCAATCCGTACATTATCGATGGATGCTATGGTATCGATGAGTGTAGTTCTCCTGATATCTACCCGTGTTACGGCAATTGTAAGAACAAACCAGGAGGATATGACTGCGACTGTCTTGACACTGGTGGAGAAACCCTTTGTAGTCCCGGTTCGTAACCCCCCTTTAGTCCCGGTTTCCAAACCGGGAGTACCAATCCGGGACTAA
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| Protein seq | MDVTTVVVSRRRFVTAAAVAVAVVALQLQLLAAAAAKNNCSRRCGDIELEYPFGVQAGCYHPGFNLTCNQSYHPPRLFLGDGTVQVLGISIPNATVRINSSVITLYDDDRSKDVAWWGKGLSNTGPYFLSESKSLLALLGCNAQVDVMVPAAAADRRNQTVVGSCTAICPPSTSDNLTIGAADDDVCSGIGCCQTNIMLGYPSYLIQMKGFQRRWTGSSVTRRVHVPGTHLPLNVAVPTALAETPLLMRIRGIAASAPMVIKAIRTLSMDAMVSMSVVLLISTRVTAIVRTNQEDMTATVLTLVEKPFVVPVRNPPLVPVSKPGVPIRD |
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| Function | Wall-associated receptor kinase 2 [UniProtKB/Swiss-Prot:Q9LMP1] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsZS97_08G0292500 | OsZS97_08T0292500.1 | Chr08 | 18634050 | 18638858 | - | makerRMon | ||
| CDS seq | ATGGATGTAACGACGGTAGTAGTAAGCCGCAGGAGATTTGTCACGGCGGCGGCTGTAGCAGTAGCAGTAGTAGCCCTCCAGCTGCAGCTGCTGGCGGCGGCGGCGGCGAAGAACAACTGCAGCAGGCGCTGCGGCGACATTGAGTTGGAGTACCCGTTCGGCGTTCAGGCCGGGTGCTACCACCCAGGCTTCAACCTCACCTGCAACCAATCCTACCACCCGCCGAGGCTGTTCCTCGGCGACGGCACGGTGCAGGTGCTCGGCATCTCCATCCCCAACGCCACGGTGCGCATCAACAGCAGCGTCATAACCCTCTACGACGACGACCGAAGCAAGGATGTGGCGTGGTGGGGCAAGGGGCTATCGAACACCGGGCCCTACTTCCTCTCGGAGTCCAAGAGCCTCCTGGCGTTGTTAGGCTGCAACGCGCAGGTCGACGTGATGGTTCCGGCCGCCGCCGCTGATCGCCGGAACCAGACGGTGGTCGGCTCCTGCACCGCGATCTGCCCGCCGTCGACCTCCGATAACTTGACGATCGGCGCAGCCGACGACGATGTTTGCTCGGGCATTGGCTGTTGCCAGACAAACATCATGTTGGGATATCCATCCTATCTCATCCAGATGAAGGGCTTTCAGCGTCGCTGGACTGGATCATCAGTAACTCGACGAGTACATGTCCCCGGAACGCATCTGCCCCTGAATGTCGCAGTGCCCACAGCTCTTGCCGAGACTCCGTTGCTAATGCGCATCAGGGGCATCGCTGCGAGTGCTCCCATGGTTATCAAGGCAATCCGTACATTATCGATGGATGCTATGGTATCGATGAGTGTAGTTCTCCTGATATCTACCCGTGTTACGGCAATTGTAAGAACAAACCAGGAGGATATGACTGCGACTGTCTTGACACTGGTGGAGAAACCCTTTGTAGTCCCGGTTCGTAACCCCCCTTTAGTCCCGGTTTCCAAACCGGGAGTACCAATCCGGGACTAA
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| Protein seq | MDVTTVVVSRRRFVTAAAVAVAVVALQLQLLAAAAAKNNCSRRCGDIELEYPFGVQAGCYHPGFNLTCNQSYHPPRLFLGDGTVQVLGISIPNATVRINSSVITLYDDDRSKDVAWWGKGLSNTGPYFLSESKSLLALLGCNAQVDVMVPAAAADRRNQTVVGSCTAICPPSTSDNLTIGAADDDVCSGIGCCQTNIMLGYPSYLIQMKGFQRRWTGSSVTRRVHVPGTHLPLNVAVPTALAETPLLMRIRGIAASAPMVIKAIRTLSMDAMVSMSVVLLISTRVTAIVRTNQEDMTATVLTLVEKPFVVPVRNPPLVPVSKPGVPIRD
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0 | 0.7295735 | 0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os08g39170 | SBH | 0.0 | 0.000000 | 0.000000 |
| Nipponbare | IRGSP 1.0 | RAP-db | NA | NA | NA | NA | NA |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_08g0013670 | RBH | 0.000000 | 0.0 | 0.000000 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_08g0013700 | RBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_08g0013580 | RBH | 0.000000 | 0.0 | 0.000000 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_08g0013870 | RBH | 0.000000 | 0.000000 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_08g0013760 | SBH | 1.896440 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_08G0394800 | SBH | 0.069682 | 0.5907 | 0.7766015 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_08g0013800 | SBH | 0.0 | 0.0 | 0.223270 |
| Zhenshan 97 | ZS97RS3 | HZAU | NA | NA | NA | NA | NA |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_08g0013300 | SBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_08g0013280 | RBH | 0.0 | 4.495595 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_Ung0012670 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_08g0013430 | SBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_08G013890 | RBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_08g0014040 | RBH | 0.656499 | 0.0 | 0.0 |
