Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsZS97_06G0386800 | OGI:06073100 | 16/16 | Zhenshan 97 | ZS97RS3 | HZAU | Chr06:26817706-26819327 | ||||||||
| Gene Symbol | ERF113, OsERF#113, OsERF113, AP2/EREBP#058, AP2/EREBP58 | ||||||||||
| DNA seq | ATGGGGAGGCCGGTGAAGCAGAAGACGACGACGTGGCTGGTCGAGCTTCTCAGGGAGTACTGCCAGCGCGCGGCGGCGCAGGCGACCGCGGGGAACGGGGCGGTGGCGGCGGCTGCGGCGGTGGAGGGGGAGATCAACACCGACGGGTTGGCGGCGCTGGCCGCGGAGGCCGAGGGTTTTGCGGCGGCGGCGGCGGCGGCCGTTGAGGGGGAGATCAACACCGAGGGGTTGGCGGCGCTGGCCGCGGAGGCGGAGGGTTTTGCGGCCGCAAACGGGGAGGGCTGGGTGGCGCCGGCCGTCGAGGGAGAGGGAGAGGGTTTCGACGGGGCGCCGGTTGTGGAGGGGGAGGAAGGTTTGACGGCGGAGCTTCCGGTGGCGGCGGAGAGGAAGTACCGGGGGGCGAGGAAGAGGCCGTGGGGGAAGTACGCGGCGGAGATCCGCATCCGCAACACGATGGGGGTGAAGGAGAGGGTGTGGCTGGGTACGTTCGGCACCGCCGAGGAGGCCGCCTGGGCGTACGACACCGCGGCGACGGTGATCCACGGGGACAAGGCGACGACCAACTTCCCCCGCGCGCCGCTGCGGCCGGCGACCACGCCGGTGATGCGTTCCATGCTCGTCTTCTTCGGGATCGCCCACCTGGTGCGCTCCCTCGTTCCAAGGGCACGTGGCCCACGTGGACGCGGTGGTGGTGCCGGTGGACGCGGCAGAAGCCGACGCCGTCGCGCGGCGGCGGCGGCGGCGCCATCAGCCCCGACAAGCGAGGCTCCTTCTCCTCCTCCTCCCTCGTCGGCGCTGGTTCCTGAGCCCGAGCTACAAGTTCAAGGCGGCCGTGGAGAGCGCGGGCGCGGGCGTGGACGTGGACGCGGTGGCGGTCGCGGCGGCCGCCGCGGCCGCGGGCGCACGCCGGCGAGGGTGGTCGCCGAGGATTCTCCGATGCTGCAGGCGACTACACCCGCTGCAGCTCCGGCGCCGGCACCGGCGCTGGCACCTGCACCGGCCAATCAAGCCATCTTCCAGCCGATGATCATCCCTCCCGGCGGCGTCGTGGTGGCTCCTGATGACTTCCTGCTGTCGGCCATCTCCGACGACGAGCCCGTGCTGCCGCACAAGAAGCCGAAGCTCCTCGGCGTCTACACCCCGCCGGACAGCCCTGATCAGTTCGTCATGGAGTTCTTCGCGGATCTCGGCGACGGCGACGACATCCTCAGCTCCTCGTTCTGGCAGGATCCGGCCGGCGACGGCGAGGACACACAGTAAGCAACCAGAATGATCCTGATCCTGAATAATTATGGCGTGCTGCATCGAAGGGATTAATTCATGGACGACGATGCTGGAAGAACTCCTCGGTGTGTTGTGATGAGATTATCATCAGAAGAATCGTTTAGTTATTTTGATCTACATTTCGATCCTTGGCCTCATGGCTCTTTGAGCATATCATGTTGTGAATTGTGATATGCTATATGTATCTGTACTCAGTTTAATTTACCTGTTTTCCTATACTGATGCTGGTTTGTTCATGTCATGTAGGCATGAAACCAGCATGTTTACCTAGTTGTTTTTTTATGACAAAAGAACCATTGTTGTATATTCTCTAGACAATAGCATGATGGCTGTGTGTT
More
|
||||||||||
| CDS seq | ATGGGGAGGCCGGTGAAGCAGAAGACGACGACGTGGCTGGTCGAGCTTCTCAGGGAGTACTGCCAGCGCGCGGCGGCGCAGGCGACCGCGGGGAACGGGGCGGTGGCGGCGGCTGCGGCGGTGGAGGGGGAGATCAACACCGACGGGTTGGCGGCGCTGGCCGCGGAGGCCGAGGGTTTTGCGGCGGCGGCGGCGGCGGCCGTTGAGGGGGAGATCAACACCGAGGGGTTGGCGGCGCTGGCCGCGGAGGCGGAGGGTTTTGCGGCCGCAAACGGGGAGGGCTGGGTGGCGCCGGCCGTCGAGGGAGAGGGAGAGGGTTTCGACGGGGCGCCGGTTGTGGAGGGGGAGGAAGGTTTGACGGCGGAGCTTCCGGTGGCGGCGGAGAGGAAGTACCGGGGGGCGAGGAAGAGGCCGTGGGGGAAGTACGCGGCGGAGATCCGCATCCGCAACACGATGGGGGTGAAGGAGAGGGTGTGGCTGGGTACGTTCGGCACCGCCGAGGAGGCCGCCTGGGCGTACGACACCGCGGCGACGGTGATCCACGGGGACAAGGCGACGACCAACTTCCCCCGCGCGCCGCTGCGGCCGGCGACCACGCCGGTGATGCGTTCCATGCTCGTCTTCTTCGGGATCGCCCACCTGGTGCGCTCCCTCGTTCCAAGGGCACGTGGCCCACGTGGACGCGGTGGTGGTGCCGGTGGACGCGGCAGAAGCCGACGCCGTCGCGCGGCGGCGGCGGCGGCGCCATCAGCCCCGACAAGCGAGGCTCCTTCTCCTCCTCCTCCCTCGTCGGCGCTGGTTCCTGAGCCCGAGCTACAAGTTCAAGGCGGCCGTGGAGAGCGCGGGCGCGGGCGTGGACGTGGACGCGGTGGCGGTCGCGGCGGCCGCCGCGGCCGCGGGCGCACGCCGGCGAGGGTGGTCGCCGAGGATTCTCCGATGCTGCAGGCGACTACACCCGCTGCAGCTCCGGCGCCGGCACCGGCGCTGGCACCTGCACCGGCCAATCAAGCCATCTTCCAGCCGATGATCATCCCTCCCGGCGGCGTCGTGGTGGCTCCTGATGACTTCCTGCTGTCGGCCATCTCCGACGACGAGCCCGTGCTGCCGCACAAGAAGCCGAAGCTCCTCGGCGTCTACACCCCGCCGGACAGCCCTGATCAGTTCGTCATGGAGTTCTTCGCGGATCTCGGCGACGGCGACGACATCCTCAGCTCCTCGTTCTGGCAGGATCCGGCCGGCGACGGCGAGGACACACAGTAA
More
|
||||||||||
| Protein seq | MGRPVKQKTTTWLVELLREYCQRAAAQATAGNGAVAAAAAVEGEINTDGLAALAAEAEGFAAAAAAAVEGEINTEGLAALAAEAEGFAAANGEGWVAPAVEGEGEGFDGAPVVEGEEGLTAELPVAAERKYRGARKRPWGKYAAEIRIRNTMGVKERVWLGTFGTAEEAAWAYDTAATVIHGDKATTNFPRAPLRPATTPVMRSMLVFFGIAHLVRSLVPRARGPRGRGGGAGGRGRSRRRRAAAAAAPSAPTSEAPSPPPPSSALVPEPELQVQGGRGERGRGRGRGRGGGRGGRRGRGRTPARVVAEDSPMLQATTPAAAPAPAPALAPAPANQAIFQPMIIPPGGVVVAPDDFLLSAISDDEPVLPHKKPKLLGVYTPPDSPDQFVMEFFADLGDGDDILSSSFWQDPAGDGEDTQ |
||||||||||
| Function | Ethylene-responsive transcription factor 4 [UniProtKB/Swiss-Prot:O80340] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsZS97_06G0386800 | OsZS97_06T0386800.1 | Chr06 | 26817706 | 26819327 | + | makerRMon | ||
| CDS seq | ATGGGGAGGCCGGTGAAGCAGAAGACGACGACGTGGCTGGTCGAGCTTCTCAGGGAGTACTGCCAGCGCGCGGCGGCGCAGGCGACCGCGGGGAACGGGGCGGTGGCGGCGGCTGCGGCGGTGGAGGGGGAGATCAACACCGACGGGTTGGCGGCGCTGGCCGCGGAGGCCGAGGGTTTTGCGGCGGCGGCGGCGGCGGCCGTTGAGGGGGAGATCAACACCGAGGGGTTGGCGGCGCTGGCCGCGGAGGCGGAGGGTTTTGCGGCCGCAAACGGGGAGGGCTGGGTGGCGCCGGCCGTCGAGGGAGAGGGAGAGGGTTTCGACGGGGCGCCGGTTGTGGAGGGGGAGGAAGGTTTGACGGCGGAGCTTCCGGTGGCGGCGGAGAGGAAGTACCGGGGGGCGAGGAAGAGGCCGTGGGGGAAGTACGCGGCGGAGATCCGCATCCGCAACACGATGGGGGTGAAGGAGAGGGTGTGGCTGGGTACGTTCGGCACCGCCGAGGAGGCCGCCTGGGCGTACGACACCGCGGCGACGGTGATCCACGGGGACAAGGCGACGACCAACTTCCCCCGCGCGCCGCTGCGGCCGGCGACCACGCCGGTGATGCGTTCCATGCTCGTCTTCTTCGGGATCGCCCACCTGGTGCGCTCCCTCGTTCCAAGGGCACGTGGCCCACGTGGACGCGGTGGTGGTGCCGGTGGACGCGGCAGAAGCCGACGCCGTCGCGCGGCGGCGGCGGCGGCGCCATCAGCCCCGACAAGCGAGGCTCCTTCTCCTCCTCCTCCCTCGTCGGCGCTGGTTCCTGAGCCCGAGCTACAAGTTCAAGGCGGCCGTGGAGAGCGCGGGCGCGGGCGTGGACGTGGACGCGGTGGCGGTCGCGGCGGCCGCCGCGGCCGCGGGCGCACGCCGGCGAGGGTGGTCGCCGAGGATTCTCCGATGCTGCAGGCGACTACACCCGCTGCAGCTCCGGCGCCGGCACCGGCGCTGGCACCTGCACCGGCCAATCAAGCCATCTTCCAGCCGATGATCATCCCTCCCGGCGGCGTCGTGGTGGCTCCTGATGACTTCCTGCTGTCGGCCATCTCCGACGACGAGCCCGTGCTGCCGCACAAGAAGCCGAAGCTCCTCGGCGTCTACACCCCGCCGGACAGCCCTGATCAGTTCGTCATGGAGTTCTTCGCGGATCTCGGCGACGGCGACGACATCCTCAGCTCCTCGTTCTGGCAGGATCCGGCCGGCGACGGCGAGGACACACAGTAA
More
|
|||||||
| Protein seq | MGRPVKQKTTTWLVELLREYCQRAAAQATAGNGAVAAAAAVEGEINTDGLAALAAEAEGFAAAAAAAVEGEINTEGLAALAAEAEGFAAANGEGWVAPAVEGEGEGFDGAPVVEGEEGLTAELPVAAERKYRGARKRPWGKYAAEIRIRNTMGVKERVWLGTFGTAEEAAWAYDTAATVIHGDKATTNFPRAPLRPATTPVMRSMLVFFGIAHLVRSLVPRARGPRGRGGGAGGRGRSRRRRAAAAAAPSAPTSEAPSPPPPSSALVPEPELQVQGGRGERGRGRGRGRGGGRGGRRGRGRTPARVVAEDSPMLQATTPAAAPAPAPALAPAPANQAIFQPMIIPPGGVVVAPDDFLLSAISDDEPVLPHKKPKLLGVYTPPDSPDQFVMEFFADLGDGDDILSSSFWQDPAGDGEDTQ
More
|
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0 | 0 | 0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_06g0691100 | SBH | 1.063584 | 0.803652 | 2.393664 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os06g42990 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os06g0691100 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_06g0023650 | RBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_06g0023460 | RBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_06g0023580 | RBH | 0.0 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_06g0023200 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_06g0023650 | RBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_06G0405400 | RBH | 0 | 0 | 0 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_06g0023130 | RBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_02G0086800 | RBH | 2.20692 | 8.8094085 | 5.672216 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_06g0023580 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_06g0023510 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_06g0023200 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_06g0023860 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_06g0023460 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_06G023240 | RBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_06g0023460 | RBH | 0.0 | 0.0 | 0.0 |
