Basic Info

Gene ID OGI # | Score   Accession | Assembly | Annotation Location Links
OsZS97_06G0272500 OGI:06052760 | 16/16 Zhenshan 97 | ZS97RS3 | HZAU Chr06:19880255-19885654
Gene Symbol MSL26, OsMSL26, -
DNA seq

TTGACAAATAACTAATTCATAGACCGACAAAATAACTTAGTCTGTTGCAATGATCCATACATCAACATTCGACAAAAGAAATTAGGCCATTACAACGATCCATACTGCCAATAGATGGTAACAACACAAGTGTTCTTACATGACACCAGCGAATTACTAAAAATTACTTTATAACTAGATTATCTTTCTCAAGCAGAACCAAAACAAGCTGCCAGCCTTCCAAATTGAGCATCTTCACTACCTGTCATTAAAGCAACATTATTTCCATGGAATATAGGAGGCTGATCATTATAGAACAATTGTAGCATATAATCTGGATGGCAAAACAACTGGAAGGAAGTAGTACTACTATTTTAAGTAGACTATTAAAGGACTTATTTGATTATGTTGTTCTTTGGACTGTACAGTGCAAGTAGACATGTACATACCTCTCAAAACCATAGCAGAAAGCACCAAAAAGCTAGCACCAAAGTTTTCCATTGTCCCTGAAATAAATAAATAAAATGATAAGTGAATTAAGATGCTTGCAATTGTAATTGAAAATGTGAAAACAAGATGCTTAATGTCCTACCACAACTAAGTACGACGGGTATTGCTAAACTTTTGCCAAATATGTTCAACCAGATCTTTTTTTAGTTGGGAATGTGGTGCACGAGCACGTATTGCAGCTTTCCTACGCAGCACCTGATCAAAGCATGGATTGTGCCCAGTAGTTACTTCAGGAGGAAGAGCAACCGATGCTCCAGGGTCCACATTCAGATCAATAGGAATTTTAAACCCCCCCTCTCTCATTTTCAACTATCATATTATGGAGAATAATACAAGCTTTCATGATTCTCCCAACACTCTTCCGCTTCCACGACCGTGCTGGGTGGCGCACAATATTGAAACGGGACTGCAGGACCCCAAATGCACACTCCACGTCTTTCCTTGCCCCTTCTTGATACTGTGCATATAGCTTGTGCTTCTCTGTTTGTGGAGCAGCTATTGACTTCACAAAGGTAGCCCATTGGATATATTCCATCAGCAAGGTAGTATCCTGTGTTATACTCATTACCATTGACAGAAAACTTTACTCTAGGAGCTTCCCCTTTCAGCACATCAAGAAATAGTGGGGATTGGTTCAGCACATTGATGTCATTATTTGACCCCGTGACACCGAAGAAAGCATGCCATATGCGGAGGTCACGAGTAGCAACCGCTTCGAGGATAATTGTTGGCACTCCATAGTCACCGCGGGTAAACTGCCCTCTCCATGCTGTTGGGCATTTTTCCCACCTCCAATGCATGCAATCAATACTGCCTAGCATCCCAGGGAAGCCCCTAGACTCATTAACTTGAAGTATACGCTCCACATCCTCATATGTGGGACGTCGCAAATACTCTGAACCAAATACCTCAATCACCCCTCGTGCGCACATATCCAAGCACTGCAAGGACGTGCTCTTGCCAATCTTAAGGTACTCATCTAGGCTATCAGCAGGGCTGCCATACGCTAGCATGCGCATTGCAGCTGTGCACTTCTGTAAAGGTGAGAGCCCTTGGCGACCACTGCAATCTACCTTTAGTGTAAAGTAAGGAGACCACCTTCCAAGGGCACTCACTATGCGAAGAAAAAGGGGTCTTCCCATACGAAATCTTGTACAGAACATGCTCTCAGGGTAAAGAGGGTCTTCACTAAAGTAGTCAGCTATGAGACGATGATGTGCTGCTGTGTGATCCCTCTTGATTGTCTTCCTTGTCACACTCTTCCTTCTGATTTTTCCAATTCTAAGCTTGGTCTTGATCTTTTCCATGACCCTTCTTGCAAAAGAATCTATGAGGTTCTGCTCAACAATGTATTGGTCTATAATTTTGGAAGGATCTAATTCACCAGAATCATCTAGAGACATGGTGGAGACAAGGGGTGCAAGGAATGGGAAAGAAGTGTTGAAAGAAATGGGAAAGAAGTGTTGAAAGGAATGGCAGAGGGATGGATAGTTAGCACCATTAGACCAATATACATATATATGGGCCAACAGTACACTGTTGGGAATGCATACTAGCTAGTAGCATGTTTATTTGAATTACCCTTAATTAGATTATTGTGAATGCATACACAGAGCATGTTTATTTGGATTACTATTAATTAGACTATTGGGAATGCATACACAAAGCATGTTTATTTGGATTAGTATTAACTAGACTATTGGGAATTCAAGACTGCATGTTTATCTGCACATTGTTGACTTGACTGCATGTTAATTTTGCAACTGCTGACTTGACTACATGTTTTTCTGGAAATAATAGCTACATGCTGACTATATTACAAGTTAGATTACATCAATATTTGCAACTCTTTGAATTGTGCAAGAAACATATATATGTTTGCAGGAAGTTCAATTGCAGCAAGTAAAAAAAAATACAACAAGCTTTAATTAGAGACTGGAAAGTGAAGATACCTTAGTATTACGGAAACAACTTCTCCCTCATACACTTCAATGCCATCAAATGCTCGGATCTAACATCATCAGGAATATCTTTTGTATCTTGTAACATGAGAGACCGATATGTTTCCAACATAACAGCCTCCTTGTGCTCCATGGCTGCAAGGTGCGCTAACTTTTTTGATTCAAGGTTATCACTAGCAACACGCCTCTGAGTCTCTAGTAGTTCATCACGACCTTTATTTGCCATCTCCTGAACTTCTTTAAGCTTGTCAATTTCATCATCAGTATCTGATAGATAAACCTTTGCCTTCCTTTTGCGTCTGCCTTTACCATTACGTTGCGCCTTAGCAGTTTTTGTTCCTATTGGACGTTTAATATCTTCAGGACTGTTAGGAGTGGACATTTGCTCCATCACTTCCACTTAATCATCCATCTTTGGTTTGTTTGGCTTCTCAAGTTCCTCCAAGTAAGAATGCCACTTTGGTTGGTCACGAAGAATGTTCCAACAATGCAGAAATGAAAATGGGCCTTCCTTGTAATCTGCTTGATATGCTGCTTCAGCCTTTTCCCTGAGTTGCATATCATTTTGTCCACTAACATATATGGATTTAACCTCTTTATAAACACAACAGAAATGGCCAACATTTTTCTTAATTTTATGAAAACGGTCTTTGATTTGTTTTTCTTGCCTTGTCCTGTTTTTGGGAGTGGTGCTATTATACTCAGCAGTAACATCTCCCCAATAACGATCATTTTTCTTAAAATTACCACTGATCGAATCATTCGAGTTGTTTAGCCAAGCACTCACCTATAATCAAAACAAAACAGGATTAGTCCTATACTAGAAATAAAGTAACAGTCAATGAGAAAACACGATTCATTGCCTACATCCTTATTTACTTACTAGTCTTATGTCCTCCTCTGTTGACCATGTCAACCGCTTCTCAGTCCTAACAGTGTGGGCTTCTTCATCACCACTATCAATGTTGACAGGTTGTTGTGCTCCTGGACGTAATTTTGAACATGGTGCTACTTGTTCAGCAGGATAATAATTTGGAGGCACAAAAGGTCGATGATTCTGTAAAATTGATGGATCCTGAAAGTAACTTAAGAAACCACCAGGCGGATGAAAGTCCATACCACTGCAAGAAAAAGACAGAGATCCAAAATTATTGCCAGATAACATCCTTAGCACTTTTTTTCTCTTCATCTGTAAATGAGTACATTAAAAATTGACAAAGCACAGCCTATGATACTAATAATTCTCATGCCATATAAAATTACTATTTTTGTGTTTGTAGATAAGTTGATTTGTCTGTTCACTACCTATGTAGTAAGAGTTCTTGATTATTCAAGAGTAAAGTCCATCACCGGTCCCTAAACTTGTACCGTTGTGTCATCCTAGTCCCTAAACTCGCAAATCGACCGTTCAGGTCCTCAAACTTGTTCGACTGTGTCATCCCGGTCCCTAAACTTGCAGATCACTCATTTAGGTCATTCAACTTGTTCAATTGTGTCACCCCGGTCCCTAAATTTGGATTTGAATATCATCTGGGTCAAATAAAACGGTCTAAAGACTTTATATTTAAAAATAATTCATAACTTTTTCATGTGAATTATAATGAAGACAAACTTTATATCAAACTTGTAGCCCTCGACGTGATCTACAACTTTGTAGTTGATTTTTTTTAATTTAAGTCATTTTTTGTCCCAAAATGTAATTTTAAAATTAAAATTTCAAAATCTATAAACATGCAACAATATTTTGGGACCCTAAACAGTTTTAATTCAAAAACTTTTCAACTACAAAGTTGTAGGTCGTGTCGAGGGCTACAATTTTGATATAAAGTTTGTCTTCATTAGAGTTCACATGAAAAAGTTATGAATTATTTTTTATATAAAGTTTTTAGACCGTCCTGTTTAGAGACCGGGGTGACACAACTGAACAAGTTGGAGGACCTAAACGAGTGATCTGCAAGTTTAAGGACTGGGATGACACAGTCGAATAAGTTTGAGGACCTAAACGGTCGATTTATGAGTTTAGGGACCGGGATGACACAGCGGTACAAGTTTAGGGACCGGTGATGGAATTTACTCATTATTCAAAGTGTATGTGTAGATTAGTACAAAAAATTTGGCCATGCACTGACCTATGTACACTAGTTATTGCTATAAAATAAATCTATATGTATCTGTAGCCCTTGCTTACTATCAAGTTATTCTCTTGCCACAAAATTTTTTCCCTTTCCGAATATAGCAAGACTTAACTTTAGTATGAGAAACAGATGTACACGTTGATTCTTGACATATTAGCAGGGGATATGCTAATCTGCTAGCAGCAGATCAGATCGTGAGGGGAAAACTAGAATACGGCAAGAATCAAACTTAGTTAGTCAACACCATTAATTTTCTAATCAACATGGAGGTACACGGAACTTCCGGAGCAAATCAATCCAAAACCATTCAATATCAAAAGTACATACCGTTCTTGCAGATCTGACAAATCAATGGCACTACGATCCAATCCTTGCTTCATTTGGGCCATGGGAAAAGCAGAAGCAGCGGCGCCGTACGCGTAGAGCAAAGGGTGCGGCGGCTGCGGTGGCGCCGGACCTTGCCAGGCACCATTGCCTAAGGATCCCGGCAACATCATGCCAGATGCGAAGGATCCCGGCGAGGCTTGCGACGGAGATGGCGGCGGCGGCGGCGCAACCTCCCGTTTCGAGCGACCCATTGTTTCAGCAGATTGAGTTGAGGGATTACTAACTAGATGGGGTATTTCAGTAGGAATTTGACGCTTCGACTAACTAATTTGGCGCGTGAAGTGCGATTTTTTTTCCCGCGGATGGGGATTTACCGCCAAATATACAGAGAAGGGATGAGCCATGGAGCATGGGATGCAAAAGGCCAAGAAAGCGCGTTATTGGTCGACAGCATCGGCTCCTGCATCGTCTCCACGCCTACTCCATCC

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CDS seq

ATGGGTCGCTCGAAACGGGAGGTTGCGCCGCCGCCGCCGCCATCTCCGTCGCAAGCCTCGCCGGGATCCTTCGCATCTGGCATGATGTTGCCGGGATCCTTAGGCAATGGTGCCTGGCAAGGTCCGGCGCCACCGCAGCCGCCGCACCCTTTGCTCTACGCGTACGGCGCCGCTGCTTCTGCTTTTCCCATGGCCCAAATGAAGCAAGGATTGGATCGTAGTGCCATTGATTTGTCAGATCTGCAAGAACGTGGTATGGACTTTCATCCGCCTGGTGGTTTCTTAAGTTACTTTCAGGATCCATCAATTTTACAGAATCATCGACCTTTTGTGCCTCCAAATTATTATCCTGCTGAACAAGTAGCACCATGTTCAAAATTACGTCCAGGAGCACAACAACCTGTCAACATTGATAGTGGTGATGAAGAAGCCCACACTGTTAGGACTGAGAAGCGGTTGACATGGTCAACAGAGGAGGACATAAGACTAGTGAGTGCTTGGCTAAACAACTCGAATGATTCGATCAGTGGAACAAAAACTGCTAAGGCGCAACGTAATGGTAAAGGCAGACGCAAAAGGAAGGCAAAGGTTTATCTATCAGATACTGATGATGAAATTGACAAGCTTAAAGAAGTTCAGGAGATGGCAAATAAAGGTCGTGATGAACTACTAGAGACTCAGAGGCGTGTTGCTAGTGATAACCTTGAATCAAAAAAGTTAGCGCACCTTGCAGCCATGGAGCACAAGGAGGCTGTTATGTTGGAAACATATCGGTCTCTCATGTTACAAGATACAAAAGATATTCCTGATGATGTTAGATCCGAGCATTTGATGGCATTGAAGTACCAATACATTGTTGAGCAGAACCTCATAGATTCTTTTGCAAGAAGGGTCATGGAAAAGATCAAGACCAAGCTTAGAATTGGAAAAATCAGAAGGAAGAGTGTGACAAGGAAGACAATCAAGAGGGATCACACAGCAGCACATCATCGTCTCATAGCTGACTACTTTAGTGAAGACCCTCTTTACCCTGAGAGCATGTTCTGTACAAGATTTCGTATGGGAAGACCCCTTTTTCTTCGCATAGTGAGTGCCCTTGGAAGGTGGTCTCCTTACTTTACACTAAAGGTAGATTGCAGTGGTCGCCAAGGGCTCTCACCTTTACAGAAGTGCACAGCTGCAATGCGCATGCTAGCGTATGGCAGCCCTGCTGATAGCCTAGATGAGTACCTTAAGATTGGCAAGAGCACGTCCTTGCAGTGCTTGGATATGTGCGCACGAGGGGTGATTGAGGTATTTGGTTCAGAGTATTTGCGACGTCCCACATATGAGGATGTGGAGCGTATACTTCAAGTTAATGAGTCTAGGGGCTTCCCTGGGATGCTAGGCAGTATTGATTGCATGCATTGGAGGTGGGAAAAATGCCCAACAGCATGGAGAGGGCAGTTTACCCGCGGTGACTATGGAGTGCCAACAATTATCCTCGAAGCGGTTGCTACTCGTGACCTCCGCATATGGCATGCTTTCTTCGGTGTCACGGGGTCAAATAATGACATCAATGTGCTGAACCAATCCCCACTATTTCTTGATGTGCTGAAAGGGGAAGCTCCTAGAGTAAAGTTTTCTGTCAATGGGACAATGGAAAACTTTGGTGCTAGCTTTTTGGTGCTTTCTGCTATGGTTTTGAGAGGTAGTGAAGATGCTCAATTTGGAAGGCTGGCAGCTTGTTTTGGTTCTGCTTGA

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Protein seq

MGRSKREVAPPPPPSPSQASPGSFASGMMLPGSLGNGAWQGPAPPQPPHPLLYAYGAAASAFPMAQMKQGLDRSAIDLSDLQERGMDFHPPGGFLSYFQDPSILQNHRPFVPPNYYPAEQVAPCSKLRPGAQQPVNIDSGDEEAHTVRTEKRLTWSTEEDIRLVSAWLNNSNDSISGTKTAKAQRNGKGRRKRKAKVYLSDTDDEIDKLKEVQEMANKGRDELLETQRRVASDNLESKKLAHLAAMEHKEAVMLETYRSLMLQDTKDIPDDVRSEHLMALKYQYIVEQNLIDSFARRVMEKIKTKLRIGKIRRKSVTRKTIKRDHTAAHHRLIADYFSEDPLYPESMFCTRFRMGRPLFLRIVSALGRWSPYFTLKVDCSGRQGLSPLQKCTAAMRMLAYGSPADSLDEYLKIGKSTSLQCLDMCARGVIEVFGSEYLRRPTYEDVERILQVNESRGFPGMLGSIDCMHWRWEKCPTAWRGQFTRGDYGVPTIILEAVATRDLRIWHAFFGVTGSNNDINVLNQSPLFLDVLKGEAPRVKFSVNGTMENFGASFLVLSAMVLRGSEDAQFGRLAACFGSA

Function -

Transcripts

Gene Transcript Chromosome Start End Strand Source
OsZS97_06G0272500 OsZS97_06T0272500-mRNA-1 Chr06 19880255 19885654 - makerRMon
CDS seq

ATGGGTCGCTCGAAACGGGAGGTTGCGCCGCCGCCGCCGCCATCTCCGTCGCAAGCCTCGCCGGGATCCTTCGCATCTGGCATGATGTTGCCGGGATCCTTAGGCAATGGTGCCTGGCAAGGTCCGGCGCCACCGCAGCCGCCGCACCCTTTGCTCTACGCGTACGGCGCCGCTGCTTCTGCTTTTCCCATGGCCCAAATGAAGCAAGGATTGGATCGTAGTGCCATTGATTTGTCAGATCTGCAAGAACGTGGTATGGACTTTCATCCGCCTGGTGGTTTCTTAAGTTACTTTCAGGATCCATCAATTTTACAGAATCATCGACCTTTTGTGCCTCCAAATTATTATCCTGCTGAACAAGTAGCACCATGTTCAAAATTACGTCCAGGAGCACAACAACCTGTCAACATTGATAGTGGTGATGAAGAAGCCCACACTGTTAGGACTGAGAAGCGGTTGACATGGTCAACAGAGGAGGACATAAGACTAGTGAGTGCTTGGCTAAACAACTCGAATGATTCGATCAGTGGAACAAAAACTGCTAAGGCGCAACGTAATGGTAAAGGCAGACGCAAAAGGAAGGCAAAGGTTTATCTATCAGATACTGATGATGAAATTGACAAGCTTAAAGAAGTTCAGGAGATGGCAAATAAAGGTCGTGATGAACTACTAGAGACTCAGAGGCGTGTTGCTAGTGATAACCTTGAATCAAAAAAGTTAGCGCACCTTGCAGCCATGGAGCACAAGGAGGCTGTTATGTTGGAAACATATCGGTCTCTCATGTTACAAGATACAAAAGATATTCCTGATGATGTTAGATCCGAGCATTTGATGGCATTGAAGTACCAATACATTGTTGAGCAGAACCTCATAGATTCTTTTGCAAGAAGGGTCATGGAAAAGATCAAGACCAAGCTTAGAATTGGAAAAATCAGAAGGAAGAGTGTGACAAGGAAGACAATCAAGAGGGATCACACAGCAGCACATCATCGTCTCATAGCTGACTACTTTAGTGAAGACCCTCTTTACCCTGAGAGCATGTTCTGTACAAGATTTCGTATGGGAAGACCCCTTTTTCTTCGCATAGTGAGTGCCCTTGGAAGGTGGTCTCCTTACTTTACACTAAAGGTAGATTGCAGTGGTCGCCAAGGGCTCTCACCTTTACAGAAGTGCACAGCTGCAATGCGCATGCTAGCGTATGGCAGCCCTGCTGATAGCCTAGATGAGTACCTTAAGATTGGCAAGAGCACGTCCTTGCAGTGCTTGGATATGTGCGCACGAGGGGTGATTGAGGTATTTGGTTCAGAGTATTTGCGACGTCCCACATATGAGGATGTGGAGCGTATACTTCAAGTTAATGAGTCTAGGGGCTTCCCTGGGATGCTAGGCAGTATTGATTGCATGCATTGGAGGTGGGAAAAATGCCCAACAGCATGGAGAGGGCAGTTTACCCGCGGTGACTATGGAGTGCCAACAATTATCCTCGAAGCGGTTGCTACTCGTGACCTCCGCATATGGCATGCTTTCTTCGGTGTCACGGGGTCAAATAATGACATCAATGTGCTGAACCAATCCCCACTATTTCTTGATGTGCTGAAAGGGGAAGCTCCTAGAGTAAAGTTTTCTGTCAATGGGACAATGGAAAACTTTGGTGCTAGCTTTTTGGTGCTTTCTGCTATGGTTTTGAGAGGTAGTGAAGATGCTCAATTTGGAAGGCTGGCAGCTTGTTTTGGTTCTGCTTGA

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Protein seq

MGRSKREVAPPPPPSPSQASPGSFASGMMLPGSLGNGAWQGPAPPQPPHPLLYAYGAAASAFPMAQMKQGLDRSAIDLSDLQERGMDFHPPGGFLSYFQDPSILQNHRPFVPPNYYPAEQVAPCSKLRPGAQQPVNIDSGDEEAHTVRTEKRLTWSTEEDIRLVSAWLNNSNDSISGTKTAKAQRNGKGRRKRKAKVYLSDTDDEIDKLKEVQEMANKGRDELLETQRRVASDNLESKKLAHLAAMEHKEAVMLETYRSLMLQDTKDIPDDVRSEHLMALKYQYIVEQNLIDSFARRVMEKIKTKLRIGKIRRKSVTRKTIKRDHTAAHHRLIADYFSEDPLYPESMFCTRFRMGRPLFLRIVSALGRWSPYFTLKVDCSGRQGLSPLQKCTAAMRMLAYGSPADSLDEYLKIGKSTSLQCLDMCARGVIEVFGSEYLRRPTYEDVERILQVNESRGFPGMLGSIDCMHWRWEKCPTAWRGQFTRGDYGVPTIILEAVATRDLRIWHAFFGVTGSNNDINVLNQSPLFLDVLKGEAPRVKFSVNGTMENFGASFLVLSAMVLRGSEDAQFGRLAACFGSA

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Event Type Chromosome Start End Strand Alternative mRNAs Total mRNAs Source

Expression

Leaf Root Panicle
FPKM 0 0 0.012043

Homologues

Genome & Annotation Homologs Type Expression(FPKM)
Leaf Root Panicle
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) OsNip_06g0521000 RBH 0.0 0.0 0.0
Nipponbare | IRGSP 1.0 | MSU LOC_Os06g32944 RBH 0.0 0.0 0.0
Nipponbare | IRGSP 1.0 | RAP-db Os06g0521000 RBH None None None
Azucena | AzucenaRS1 | Gramene(+IsoSeq) OsAzu_06g0017770 RBH 0.0 0.0 0.0
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) OsKeNa_06g0017590 RBH 0.0 0.0 0.0
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) OsCMeo_06g0017700 RBH 0.0 0.0 0.0
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) OsARC_06g0017590 RBH 0.0 0.0 None
PR 106 | Os127742RS1 | Gramene(+IsoSeq) OsPr106_06g0017750 RBH 0.0 0.0 0.0
Minghui 63 | MH63RS3 | HZAU OsMH63_06G0297100 RBH 0 0 0
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) OsIR64_06g0017280 RBH 0.0 0.0 0.0
Zhenshan 97 | ZS97RS3 | HZAU NA NA NA NA NA
LIMA | Os127564RS1 | Gramene(+IsoSeq) OsLima_06g0017630 RBH 0.0 0.0 None
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) OsKYG_06g0017560 RBH 0.0 0.0 None
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) OsGoSa_06g0017250 RBH 0.0 0.0 None
LIU XU | Os125827RS1 | Gramene(+IsoSeq) OsLiXu_06g0017970 RBH 0.0 0.0 0.0
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) OsLaMu_06g0017400 RBH 0.0 0.0 None
N22 | OsN22RS2 | Gramene(+IsoSeq) OsN22_06G017400 RBH 0.0 0.0 0.0
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) OsNaBo_06g0017580 RBH 0.0 0.0 0.0
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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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