Basic Info

Gene ID OGI # | Score   Accession | Assembly | Annotation Location Links
OsZS97_06G0207700 OGI:06036710 | 7/16 Zhenshan 97 | ZS97RS3 | HZAU Chr06:12539187-12541045
Gene Symbol -
DNA seq

GAAAACCAGGGGATATTATTAAAACTTAAAAACAGAGTACATAGTTGATCGTACAGTTAAGAGATCTGAAGTTATCATTCAGAAGTCTAGCATAAAAACTTCTATGAGGATAAGCAGAATGCTCAATGTTTTGACAATTTTGGATAAAGTTCCTCCTGGTACCGGACTTGGCTTCCTTCGCTAATTTGTCGGCCATCTTGTTAACTTCTCTTGGAACCCATCGAACCTGTATAAGATCAATTGAAGTGGAAGAGATAATTTGGGTCCACAAAGCCCTTAAACTCCAGTGACCTGGCTCCTCTAGAAAATTTCTCCTTTTTGCAGTATCAGCAATGGTGGAGTTATCCGTTAGAAAAGTGGTACCTGCAATGTGAAGAGATTGGGAAATTTCCAAAGCTAATTGGAGAGCTAACAGTTCAGCCTGAAGGGCAGATTGAGCTTTCTTAGAAGTGGCTTTAATGAATATAGCATTATGATTGAGGGGGAGATGAAAGAAAATTCCTATTCCTGTGATTCCATTCTCCCAGGCAAGTATCTACAAAGCACCTGTTTCCATTGGGAATGCTGTCCATTCTTCTATGCTCCAGCTCTGACTGCTCTTGATCCTGCAAGTTTGACTGAGATAAAACATGCATATAAGAATTAGCCATCGCATCCGCCATGTAGCACACCTGAGAGGGTTCCTTAAAAATGCCCTGAAATTTAATGTCATTTCTAGCTTTCCAAAGTTGCCAGCAAATGATAAGAAAATTGTTTAAGTTAATTCTATTAAGACCATTGTTAGTAATGTAAACAGCAATCAGAGCAAGATGTGCATCAGCAGGCAAATTGTCAATATCGATTCTGTATCCTGAAACCATCCAAGTTAACCTGCTATAAGGACAAGAGGAAAAAAAGGTGAAAATCACTTTCAGGCATACCACATCGCAGCAAGCAGCAGAAATATCATGGATTCTTTGATTCAATCTGAGACAAGAGGGAAGAGCTCCTCTGAAGAGCCTCCAAGCGAAAACCTTTACCTTAGGAGGCAAATTTCTATCTTTCCAAACTGTTTTCATCAGAGCAATTGAATGAGGATTTACCTGAGAGTACCTGTGCTCCTCTCTTTTAATGAATTCCTTGTAAGCGCTTTTTTGTATTGCATTCACCTTTTTTGAGTATTTCCAACAGAGTTTGTCTTCTGTGCTTCCTTGAGAAATGTGGACCTGTAAAATTTTGTGAACTACTTCCTGCTCAAACAGGGAATTGAGTTTTTGAACATCCCAATCTTTGTCATCATTCCACAAATCTGCAACTTTAATGGGTAGATTACTAGGCATATGGTTAGTTTTGATGAAATTGAAGTTATCATCTTTGAGATCACACCAAGGTTGATTCCAAATGGAAATATTGCCGGTCCCCAATTGCCAAGTGACTGAATGTTTAAGAACTTTCCAAATATGGCATAGGGTTAGTTTTGATGAAATTGAAGTTATCATCTTTGAGATCACACCAAGGTTGATTCCAAATGGAAATATTGCCGGTCCCCAATTGCCAAGTGACTGAATGTTTAAGAACTTTCCTAATATGCGACACAGAACTCCAGTATACTGATTTAGAGACATGTCTAGGAGCATCCCAAAGAGAACAGTTGGGGAAATACTTACCGTTAGAGTGCGCAGCCCGGCCCACCAACCGTGGGCCACCCAGGTCACATTGAGCCTGCTCCACCACAGGCCCAACCGGAGCCACAATTTTAGATCCTGAGCCTACACAACCCAAAAGACTAGTCTGATGGGTGAGGACCGCCTCTACCTTTTAACTTGTGCTCCCCCATCATCAATTACCGATGTGGGACTAAATCCAACAATCTCCTCCAT

More
CDS seq

ATGGAGGAGATTGTTGGATTTAGTCCCACATCGGCTCAGGATCTAAAATTGTGGCTCCGGTTGGGCCTGTGGTGGAGCAGGCTCAATGTGACCTGGGTGGCCCACGGTTGGTGGGCCGGGCTGCGCACTCTAACGGTCCACATTTCTCAAGGAAGCACAGAAGACAAACTCTGTTGGAAATACTCAAAAAAGGTGAATGCAATACAAAAAAGCGCTTACAAGGAATTCATTAAAAGAGAGGAGCACAGGTACTCTCAGGTAAATCCTCATTCAATTGCTCTGATGAAAACAGTTTGGAAAGATAGAAATTTGCCTCCTAAGGATCAAGAGCAGTCAGAGCTGGAGCATAGAAGAATGGACAGCATTCCCAATGGAAACAGGTGCTTTGCTGAACTGTTAGCTCTCCAATTAGCTTTGGAAATTTCCCAATCTCTTCACATTGCAGGTACCACTTTTCTAACGGATAACTCCACCATTGCTGATACTGCAAAAAGGAGAAATTTTCTAGAGGAGCCAGGTCACTGGAGTTTAAGGGCTTTGTGGACCCAAATTATCTCTTCCACTTCAATTGATCTTATACAGGTTCGATGGGTTCCAAGAGAAGTTAACAAGATGGCCGACAAATTAGCGAAGGAAGCCAAGTCCGGTACCAGGAGGAACTTTATCCAAAATTGTCAAAACATTGAGCATTCTGCTTATCCTCATAGAAGTTTTTATGCTAGACTTCTGAATGATAACTTCAGATCTCTTAACTGTACGATCAACTATGTACTCTGTTTTTAA

More
Protein seq

MEEIVGFSPTSAQDLKLWLRLGLWWSRLNVTWVAHGWWAGLRTLTVHISQGSTEDKLCWKYSKKVNAIQKSAYKEFIKREEHRYSQVNPHSIALMKTVWKDRNLPPKDQEQSELEHRRMDSIPNGNRCFAELLALQLALEISQSLHIAGTTFLTDNSTIADTAKRRNFLEEPGHWSLRALWTQIISSTSIDLIQVRWVPREVNKMADKLAKEAKSGTRRNFIQNCQNIEHSAYPHRSFYARLLNDNFRSLNCTINYVLCF

Function -

Transcripts

Gene Transcript Chromosome Start End Strand Source
OsZS97_06G0207700 OsZS97_06T0207700.1 Chr06 12539187 12541045 - makerRMon
CDS seq

ATGGAGGAGATTGTTGGATTTAGTCCCACATCGGCTCAGGATCTAAAATTGTGGCTCCGGTTGGGCCTGTGGTGGAGCAGGCTCAATGTGACCTGGGTGGCCCACGGTTGGTGGGCCGGGCTGCGCACTCTAACGGTCCACATTTCTCAAGGAAGCACAGAAGACAAACTCTGTTGGAAATACTCAAAAAAGGTGAATGCAATACAAAAAAGCGCTTACAAGGAATTCATTAAAAGAGAGGAGCACAGGTACTCTCAGGTAAATCCTCATTCAATTGCTCTGATGAAAACAGTTTGGAAAGATAGAAATTTGCCTCCTAAGGATCAAGAGCAGTCAGAGCTGGAGCATAGAAGAATGGACAGCATTCCCAATGGAAACAGGTGCTTTGCTGAACTGTTAGCTCTCCAATTAGCTTTGGAAATTTCCCAATCTCTTCACATTGCAGGTACCACTTTTCTAACGGATAACTCCACCATTGCTGATACTGCAAAAAGGAGAAATTTTCTAGAGGAGCCAGGTCACTGGAGTTTAAGGGCTTTGTGGACCCAAATTATCTCTTCCACTTCAATTGATCTTATACAGGTTCGATGGGTTCCAAGAGAAGTTAACAAGATGGCCGACAAATTAGCGAAGGAAGCCAAGTCCGGTACCAGGAGGAACTTTATCCAAAATTGTCAAAACATTGAGCATTCTGCTTATCCTCATAGAAGTTTTTATGCTAGACTTCTGAATGATAACTTCAGATCTCTTAACTGTACGATCAACTATGTACTCTGTTTTTAA

More
Protein seq

MEEIVGFSPTSAQDLKLWLRLGLWWSRLNVTWVAHGWWAGLRTLTVHISQGSTEDKLCWKYSKKVNAIQKSAYKEFIKREEHRYSQVNPHSIALMKTVWKDRNLPPKDQEQSELEHRRMDSIPNGNRCFAELLALQLALEISQSLHIAGTTFLTDNSTIADTAKRRNFLEEPGHWSLRALWTQIISSTSIDLIQVRWVPREVNKMADKLAKEAKSGTRRNFIQNCQNIEHSAYPHRSFYARLLNDNFRSLNCTINYVLCF

More
Event Type Chromosome Start End Strand Alternative mRNAs Total mRNAs Source

Expression

Leaf Root Panicle
FPKM 0 0.046642 0

Homologues

Genome & Annotation Homologs Type Expression(FPKM)
Leaf Root Panicle
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) OsNip_06g0286375 SBH 8.260930 7.201994 15.944862
Nipponbare | IRGSP 1.0 | MSU LOC_Os06g22350 RBH 0.0 0.0 0.0
Nipponbare | IRGSP 1.0 | RAP-db Os06g0286375 SBH None None None
Azucena | AzucenaRS1 | Gramene(+IsoSeq) OsAzu_06g0013820 RBH 0.0 0.0 0.0
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) OsKeNa_06g0013610 RBH 0.0 0.0 0.0
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) OsCMeo_06g0013770 RBH 0.0 0.0 0.0
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) OsARC_06g0013750 RBH 0.0 0.0 None
PR 106 | Os127742RS1 | Gramene(+IsoSeq) OsPr106_06g0007100 SBH 0.0 0.0 0.0
Minghui 63 | MH63RS3 | HZAU OsMH63_06G0212100 RBH 0.013945 0 0
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) OsIR64_06g0014170 RBH 0.0 0.0 0.111332
Zhenshan 97 | ZS97RS3 | HZAU NA NA NA NA NA
LIMA | Os127564RS1 | Gramene(+IsoSeq) NA NA NA NA NA
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) OsKYG_06g0007160 SBH 0.0 0.0 None
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) NA NA NA NA NA
LIU XU | Os125827RS1 | Gramene(+IsoSeq) OsLiXu_06g0014980 SBH 0.0 0.0 0.0
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) NA NA NA NA NA
N22 | OsN22RS2 | Gramene(+IsoSeq) OsN22_06G014320 RBH 0.0 0.0 0.0
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) NA NA NA NA NA
Powered by

© 2021- Rice Gene Index @Zhang Lab. All Rights Reserved.

National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

Any comments and suggestions, please contact us.