Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsZS97_06G0010700 | OGI:06001620 | 32/50 | Zhenshan 97 | ZS97RS3 | HZAU | Chr06:561029-564288 | ||||||||
| Gene Symbol | MTN,OsMTN | ||||||||||
| Mutant | - | ||||||||||
| Stuctural Variations | |||||||||||
| DNA seq | TTTAGATCCATGGAGTAGTTTCTCTAAATTTTCCACATGATCAATGTGAATACAGACGGAGATTATACATACAGTTTTTAAAGTTAAGCATTACCCATCTCTAAAAACATTGATAGACGTGTGAGAAGTGACAAAAGAGTATTTAAAATGAAATCCGGCAATTAGCAGTGACAGCCGGCGCTAATCATGCCGTCAAGCTGCCCTCTATCTGACGACCCACACCCACCGTCTCTCTCTCCTCCCCCACCACGCGGCGGCGGCAGCAGCAGCAGCTAGGGTTTAGAGAGCAGCCCCCAATCCCATGGCGCCGCCCTCCGACTCCGACGACTCGGCCCCGATCCCCGCCGGCGCCATCTCCAAGCTCCTCATCGTCATAGGTACTCTCAATCCTCATCCCCTCCTGCGCTTCTGCTTCTTGTTGCTAATCCCGTTGCTGTCGTTTGGTTGGTTTGGCTTCAGCGATGCAGACGGAGGCGCTCCCGCTCGTCAACAAGTTCCACCTCGTCGAGGCGGAGGAATCCATGTTAGTAGTGTTCTCCCGTTTCTCCCCCCTTGTTCCTCTTCACCAACCATTTCCTACCCTTCCATGCCATGCTGCACTTACTGCTGTTGGGTGGTTATAAGTTAAATCCCTGGAATTAGGATTTTTTTTAAAAAAAAAGAAAAGAAAAAAGAACAAGTTATTTTTGTGGATGGTGATGTTCTGCTTTACTAGGCAAGTTTAGTGGCAACCTTCGTTTAATCTGTCTCATGAAAATGTCAATGTCAGCTGTCCTCGAAACTTTTGGAAATAATTATATCCAACTTACAGGGATAGTCTGATACGATCCGTTTTCACTATTCCTGTTCCTGTGTCCTTCATACATAAATTAAGCTTTAACCTTGTGTCATCACCCTGTTTTGCTCATATAACCTGTCCGATACTCTCAGCTCTGAAGCTAACTCCTACCTTTGTGGCACACGCCTAACAGATTTCCTAAAGGTGCCCCATGGATTAGATACCATGGCAACTACAAAGGCCTTCACGTTGACCTTGTATGGCCTGGAAAAGATCCTGTTCTCGGTAAGTTGTCATCTATAATATGCTGCTCACCAGCTTGTTGTCAAGAATCAAGCAATAATTTGATAGGTTTCTTCATCATGTAATTCTTACAATTTATCCACAAACTAACCTTATTTCTTTCAGGAGTTGACTGTGTTGGCACGGTATCAGCAGCACTTGTGACTTATGCTTCTATTCAGTCATTGAAGCCAGATCTGATCATCAATGCTGGCACTGCTGGTGGGTTTAAGGTAATGTTTCAAGATATCACATGTTTGATGCCATGCTGTCGTTTTATTGTACCTGGGTTCTGATGTTGTTTCCCTTCTGGTCTTTCAGGCCAAAGGAGCAGACATTGGAGATGTCTACTTAGCATCCGATGTTGCATTCCACGATAGGAGAATACCTATCCCTGTGAGTGTTCTGTTATGTCTTGTAGTATTTTTTTTTGTGGACCTAGTCCCATTTTTCTGCAGTGTGACCTTATTCAGTTCATTGATGTGCTACATTATTAGAATTCAGAAAGTCATACATGTCTTGAACAAAACATTGCTAGTTTTTATCTGTTTATTTCATAATCCAGTCCGTTTCATGGTTTTCTAATTCTACCTTCCTGCACCGTGACAACTAATTATTTATAAACTTATAGTCTGCTTTACTCACTTGTGCTTCTGGTGACATCTGCTCCTTTGCCATTTATTCTCAAGATATTATATTTGCATCGCCATATTTTCTACAAGTTCTTTTTAGATAATCTATACACGTTTAATTGAGATGTTGACATGGACCTTCTTGGCTTATCCACAGGTCTTCGACATGTATGGAATTGGAACACGAAAAACATTTGCTACCCCTAATATATTGAAGGAACTCAATTTGAAGGTAAGCTACAGAGCTATGCTAGTTGATGCCAAACTGCTGGAATGAATACTGTGTGAGTCGTGCTTACATGCATATATCTTACTGTCTCCTTTAGCATGGTGTTGTTTCTGAAACGAATTTGTGGATTTTATTGGTAAACTGTAGCACTGTATAGACTCAACAAGATGAGTCGATCACATGCTAGTGTTCAACATTCCGGAAGTCATTGTGCCTTATTTGCTTCAGGTTGGGAAGCTCTCAACTGGCGATTCTCTAGATATGTCTCCCCATGACGAGTCAGCAATATTGAACAATGATGCTACAGTCAAGGATATGGAGGTATCTATTTACTTCTGCTCAAGCATTCAGCTTAAGAACATAGGCACACAACAGGGAAATGGAGGTCTTCAACCATAGGTTCCTCTTGGAAGTTGGAATGAGTTCATCCTTTATGAACTTTAGGACAACTTTTACACATCTTGCATTTTGTGGGTCGTTATGGCATTGAAGTAGGCAAATGTCTATAGGAATATATTTTTATCCAACTAATTATTTGCTGATCTCTTCAGTTTTTTTGTTAATGCCTGAGTTCAAGTTAAATCGACTAGCATGAATAAGATACTTTGTGTGCACTGGTATTCATACGAAGTTATCTGCTGCTCTGCTTTGTTTTCAGTTGTAATTTGTAGGCTCAAACTGGCTTCGTTATTCTTGTTTTTCCAGGGAGCCGCGGTGGCATATGTTGCTGACATGTTTTCAACACCGGCAATCTTTGTGAAAGCTGTGACTGATATTGTTGATGGGGAGAAACCAACAGCCGAGGAGTTTCTGCAGAACCTGGTTGCTGTGACAGCAGCTCTGGACAAGGCAGTTACAGAAGTGGTTGATTTCATCAGTGGGAAATGCATATCGGATCTTTGAATGATGAAGCTTAGAAACCTGTTCATCAAATCCAAGCTCTGCTGCTTCAATGCACTATACTATACTACATCACTGCTGTATGATTTTTCATGGGGATGCGTATACAATTTTTAGGTTCCCCTGAGGCCCTGATCCCCCGTATGTACAAAATTCTTGGCAATTACTTGGATCAATGGCGTGGAATTTTGTAGAATATTCTGCAAAATGTGCAGTGTAATGAAACTAAATAAGGTGATATTCTGTCAAACTAAGATAAGTGGTGGGCGGTGGAGTTATTTTCTTTAATAGAGCATTGAGACCATCTTCATTGTTTGCTCTACGATTGGTAAACTGTGAAAAAAAAAACCCGAAGAAGCAATAAACATAGTTTACGTGTAGACCTTTTATGTTTGTATTCTTAGTGATTAAAAAACTCATGCTAGAGAATAAATACGAT
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| CDS seq | ATGGCGCCGCCCTCCGACTCCGACGACTCGGCCCCGATCCCCGCCGGCGCCATCTCCAAGCTCCTCATCGTCATAGCGATGCAGACGGAGGCGCTCCCGCTCGTCAACAAGTTCCACCTCGTCGAGGCGGAGGAATCCATATTTCCTAAAGGTGCCCCATGGATTAGATACCATGGCAACTACAAAGGCCTTCACGTTGACCTTGTATGGCCTGGAAAAGATCCTGTTCTCGGAGTTGACTGTGTTGGCACGGTATCAGCAGCACTTGTGACTTATGCTTCTATTCAGTCATTGAAGCCAGATCTGATCATCAATGCTGGCACTGCTGGTGGGTTTAAGGCCAAAGGAGCAGACATTGGAGATGTCTACTTAGCATCCGATGTTGCATTCCACGATAGGAGAATACCTATCCCTGTCTTCGACATGTATGGAATTGGAACACGAAAAACATTTGCTACCCCTAATATATTGAAGGAACTCAATTTGAAGGTTGGGAAGCTCTCAACTGGCGATTCTCTAGATATGTCTCCCCATGACGAGTCAGCAATATTGAACAATGATGCTACAGTCAAGGATATGGAGGGAGCCGCGGTGGCATATGTTGCTGACATGTTTTCAACACCGGCAATCTTTGTGAAAGCTGTGACTGATATTGTTGATGGGGAGAAACCAACAGCCGAGGAGTTTCTGCAGAACCTGGTTGCTGTGACAGCAGCTCTGGACAAGGCAGTTACAGAAGTGGTTGATTTCATCAGTGGGAAATGCATATCGGATCTTTGA
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| Protein seq | MAPPSDSDDSAPIPAGAISKLLIVIAMQTEALPLVNKFHLVEAEESIFPKGAPWIRYHGNYKGLHVDLVWPGKDPVLGVDCVGTVSAALVTYASIQSLKPDLIINAGTAGGFKAKGADIGDVYLASDVAFHDRRIPIPVFDMYGIGTRKTFATPNILKELNLKVGKLSTGDSLDMSPHDESAILNNDATVKDMEGAAVAYVADMFSTPAIFVKAVTDIVDGEKPTAEEFLQNLVAVTAALDKAVTEVVDFISGKCISDL |
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| Function | 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase [UniProtKB/Swiss-Prot:Q7XA67] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsZS97_06G0010700 | OsZS97_06T0010700.1 | Chr06 | 561029 | 564288 | + | makerRMon | ||
| CDS seq | ATGGCGCCGCCCTCCGACTCCGACGACTCGGCCCCGATCCCCGCCGGCGCCATCTCCAAGCTCCTCATCGTCATAGCGATGCAGACGGAGGCGCTCCCGCTCGTCAACAAGTTCCACCTCGTCGAGGCGGAGGAATCCATATTTCCTAAAGGTGCCCCATGGATTAGATACCATGGCAACTACAAAGGCCTTCACGTTGACCTTGTATGGCCTGGAAAAGATCCTGTTCTCGGAGTTGACTGTGTTGGCACGGTATCAGCAGCACTTGTGACTTATGCTTCTATTCAGTCATTGAAGCCAGATCTGATCATCAATGCTGGCACTGCTGGTGGGTTTAAGGCCAAAGGAGCAGACATTGGAGATGTCTACTTAGCATCCGATGTTGCATTCCACGATAGGAGAATACCTATCCCTGTCTTCGACATGTATGGAATTGGAACACGAAAAACATTTGCTACCCCTAATATATTGAAGGAACTCAATTTGAAGGTTGGGAAGCTCTCAACTGGCGATTCTCTAGATATGTCTCCCCATGACGAGTCAGCAATATTGAACAATGATGCTACAGTCAAGGATATGGAGGGAGCCGCGGTGGCATATGTTGCTGACATGTTTTCAACACCGGCAATCTTTGTGAAAGCTGTGACTGATATTGTTGATGGGGAGAAACCAACAGCCGAGGAGTTTCTGCAGAACCTGGTTGCTGTGACAGCAGCTCTGGACAAGGCAGTTACAGAAGTGGTTGATTTCATCAGTGGGAAATGCATATCGGATCTTTGA
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| Protein seq | MAPPSDSDDSAPIPAGAISKLLIVIAMQTEALPLVNKFHLVEAEESIFPKGAPWIRYHGNYKGLHVDLVWPGKDPVLGVDCVGTVSAALVTYASIQSLKPDLIINAGTAGGFKAKGADIGDVYLASDVAFHDRRIPIPVFDMYGIGTRKTFATPNILKELNLKVGKLSTGDSLDMSPHDESAILNNDATVKDMEGAAVAYVADMFSTPAIFVKAVTDIVDGEKPTAEEFLQNLVAVTAALDKAVTEVVDFISGKCISDL
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsZS97_06G0010700 | OsZS97_06T0010700.2 | Chr06 | 561029 | 564155 | + | makerRMon | ||
| CDS seq | ATGGCGCCGCCCTCCGACTCCGACGACTCGGCCCCGATCCCCGCCGGCGCCATCTCCAAGCTCCTCATCGTCATAGCGATGCAGACGGAGGCGCTCCCGCTCGTCAACAAGTTCCACCTCGTCGAGGCGGAGGAATCCATATTTCCTAAAGGTGCCCCATGGATTAGATACCATGGCAACTACAAAGGCCTTCACGTTGACCTTGTATGGCCTGGAAAAGATCCTGTTCTCGTTGACTGTGTTGGCACGGTATCAGCAGCACTTGTGACTTATGCTTCTATTCAGTCATTGAAGCCAGATCTGATCATCAATGCTGGCACTGCTGGTGGGTTTAAGGCCAAAGGAGCAGACATTGGAGATGTCTACTTAGCATCCGATGTTGCATTCCACGATAGGAGAATACCTATCCCTGTCTTCGACATGTATGGAATTGGAACACGAAAAACATTTGCTACCCCTAATATATTGAAGGAACTCAATTTGAAGGTTGGGAAGCTCTCAACTGGCGATTCTCTAGATATGTCTCCCCATGACGAGTCAGCAATATTGAACAATGATGCTACAGTCAAGGATATGGAGGGAGCCGCGGTGGCATATGTTGCTGACATGTTTTCAACACCGGCAATCTTTGTGAAAGCTGTGACTGATATTGTTGATGGGGAGAAACCAACAGCCGAGGAGTTTCTGCAGAACCTGGTTGCTGTGACAGCAGCTCTGGACAAGGCAGTTACAGAAGTGGTTGATTTCATCAGTGGGAAATGCATATCGGATCTTTGA
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| Protein seq | MAPPSDSDDSAPIPAGAISKLLIVIAMQTEALPLVNKFHLVEAEESIFPKGAPWIRYHGNYKGLHVDLVWPGKDPVLVDCVGTVSAALVTYASIQSLKPDLIINAGTAGGFKAKGADIGDVYLASDVAFHDRRIPIPVFDMYGIGTRKTFATPNILKELNLKVGKLSTGDSLDMSPHDESAILNNDATVKDMEGAAVAYVADMFSTPAIFVKAVTDIVDGEKPTAEEFLQNLVAVTAALDKAVTEVVDFISGKCISDL
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 12.9459445 | 14.325418 | 30.8163965 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_06g0112200 | RBH | 4.422867 | 4.206799 | 8.278240 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os06g02220 | RBH | 2.978087 | 2.567899 | 1.934013 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os06g0112200 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_06g0000870 | RBH | 0.715803 | 48.637211 | 6.203232 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_06g0000870 | RBH | 0.397213 | 28.201725 | 2.937760 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_06g0000840 | RBH | 0.000000 | 45.459435 | 7.899036 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_06g0000840 | RBH | 0.217756 | 0.471615 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_06g0000830 | RBH | 2.676073 | 38.856663 | 11.276327 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_06G0010000 | RBH | 6.967654 | 23.045231 | 5.352061 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_06g0000800 | RBH | 0.371618 | 1.963022 | 0.647529 |
| Zhenshan 97 | ZS97RS3 | HZAU | NA | NA | NA | NA | NA |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_06g0000830 | RBH | 0.204744 | 0.448945 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_06g0000830 | RBH | 0.450093 | 12.401201 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_06g0000850 | RBH | 1.572583 | 38.803329 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_06g0000830 | RBH | 0.000000 | 0.744729 | 0.138834 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_06g0000790 | RBH | 0.321957 | 16.337120 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_06G000830 | RBH | 0.193211 | 11.010090 | 3.914544 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_06g0000820 | RBH | 0.830929 | 33.549187 | 12.317363 |
| Os XI: R9311 | R9311 | AGIS | R9311C06g21481 | RBH | None | None | None |
| Os XI-adm: HZ | HZ | PKU | OsHZ_06g0008800 | RBH | None | None | None |
| Os XI-adm: J4155S | J4155S | PKU | OsJ4155_06g0008800 | RBH | None | None | None |
| Os XI-adm: LK638S | LK638S | PKU | OsLK638S_06g0008700 | RBH | None | None | None |
| Os XI-adm: XL628S | XL628S | PKU | OsXL628S_06g0008600 | RBH | None | None | None |
| Os GJ-temp: 02428 | 02428 | SICAU | Os02428G0609574500.01 | RBH | None | None | None |
| Os cB: Basmati1 | Basmati1 | SICAU | OsBasmati1G0620903500.01 | RBH | None | None | None |
| Os O.glaberrima: Ogla | OglaRS2 | DIADE | Oglab_018028 | RBH | None | None | None |
| Os XI-1A: CN1 | CN1 | SICAU | OsCN1G0618075500.01 | RBH | None | None | None |
| Os XI-1A: D62 | D62 | SICAU | OsD62G0620020700.01 | RBH | None | None | None |
| Os XI-1A: DG | DG | SICAU | OsDGG0611831500.01 | RBH | None | None | None |
| Os GJ-temp: DHX2 | DHX2 | SICAU | OsDHX2G0613566700.01 | RBH | None | None | None |
| Os XI-adm: FH838 | FH838 | SICAU | OsFH838G0615811500.01 | RBH | None | None | None |
| Os XI-1A: FS32 | FS32 | SICAU | OsFS32G0613108100.01 | RBH | None | None | None |
| Os XI-1A: G46 | G46 | SICAU | OsG46G0610597500.01 | RBH | None | None | None |
| Os XI-adm: G630 | G630 | SICAU | OsG630G0609513700.01 | RBH | None | None | None |
| Os XI-1B: G8 | G8 | SICAU | OsG8G0612826900.01 | RBH | None | None | None |
| Os XI-1A: II32 | II32 | SICAU | OsII32G0619853500.01 | RBH | None | None | None |
| Os XI-1B: J4155 | J4155 | SICAU | OsJ4155G0611929700.01 | RBH | None | None | None |
| Os GJ-temp: Kosh | Kosh | SICAU | OsKoshG0613726500.01 | RBH | None | None | None |
| Os GJ-temp: KY131 | KY131 | SICAU | OsKY131G0611657100.01 | RBH | None | None | None |
| Os GJ-trp: Lemont | Lemont | SICAU | OsLemontG0609582900.01 | RBH | None | None | None |
| Os GJ-adm: LJ | LJ | SICAU | OsLJG0609595300.01 | RBH | None | None | None |
| Os GJ-sbtrp: NamRoo | NamRoo | SICAU | OsNamRooG0613496500.01 | RBH | None | None | None |
| Os XI-1B: R498 | R498 | SICAU | OsR498G0611500300.01 | RBH | None | None | None |
| Os XI-1B: R527 | R527 | SICAU | OsR527G0611856700.01 | RBH | None | None | None |
| Os XI-1B: S548 | S548 | SICAU | OsS548G0625843900.01 | RBH | None | None | None |
| Os XI-2: TM | TM | SICAU | TMG0615586100.01 | RBH | None | None | None |
| Os XI-3: Tumba | Tumba | SICAU | OsTumbaG0611169700.01 | RBH | None | None | None |
| Os XI-adm: WSSM | WSSM | SICAU | OsWSSMG0609586500.01 | RBH | None | None | None |
| Os XI-1B: Y3551 | Y3551 | SICAU | OsY3551G0612802300.01 | RBH | None | None | None |
| Os XI-1B: Y58S | Y58S | SICAU | OsY58SG0613112900.01 | RBH | None | None | None |
| Os XI-adm: YX1 | YX1 | SICAU | OsYX1G0616452900.01 | RBH | None | None | None |
| Os GJ-temp: ZH11 | ZH11 | SICAU | OsZH11G0611568100.01 | RBH | None | None | None |
