Basic Info

Gene ID OGI # | Score   Accession | Assembly | Annotation Location Links
OsN22_06G000830 OGI:06001630 | 49/50 N22 | OsN22RS2 | Gramene(+IsoSeq) Chr06:588243-593585
Gene Symbol -
Mutant -
Stuctural Variations

TM_117534_OTH0600790,TM_117534_DEL0600800,R9311_117534_OTH0600430,R9311_117534_DEL0600440,II32_117534_OTH0602190,Basmati1_117534_OTH0600510,S548_117534_OTH0600530,OglaRS2_117534_INV0601330,YX1_117534_OTH0600610,YX1_117534_DEL0600620,127742_117534_OTH0600430,127742_117534_DEL0600440,R498_117534_OTH0600430,127518_117534_OTH0600460,127652_117534_OTH0600470,127652_117534_DEL0600480,Y3551_117534_OTH0600430,WSSM_117534_OTH0601320,XL628S_117534_OTH0600480,XL628S_117534_DEL0600490,132424_117534_OTH0600580,G46_117534_OTH0600790,D62_117534_OTH0600440,D62_117534_DEL0600450,Y58S_117534_OTH0600440,Y58S_117534_DEL0600450,J4155S_117534_OTH0600420,J4155S_117534_DEL0600430,FS32_117534_OTH0600420,HZ_117534_OTH0600490,127564_117534_OTH0600540,127564_117534_DEL0600550,IR64_117534_OTH0601290,ZS97RS3_117534_OTH0600450,Tumba_117534_OTH0601180,DG_117534_OTH0600710,LK638S_117534_OTH0600460,LK638S_117534_DEL0600470,G8_117534_OTH0600470,125827_117534_OTH0600540,CN1_117534_OTH0600960,J4155_117534_OTH0600440,J4155_117534_DEL0600450,

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DNA seq

CACCACGCGGCGGCGGCAGCAGCAGCAGCTAGGGTTTAGAGAGCAGCCCCCAATCCCATGGCGCCGCCCTCCGACTCCGACGACTCGGCCCCGATCCCCGCCGGCGCCATCTCCAAGCTCCTCATCGTCATAGGTACTCTCAATCCTCATCCCCTCCTGCGCTTCTGCTTCTTGTTGCTAATCCCGTTGCTGTTGTTTGGTTGGTTTGGCTTCAGCGATGCAGACGGAGGCGCTCCCGCTCGTCAACAAGTTCCACCTCGTCGAGGCGGAGGAATCCATGTTAGTAGTGTTCTCCCGTTTCTCCCCCCTTGTTCCTCTTCACCAACCATTTCCTATCCTTCCATGCCATGCTGCACTTACTGCTGTTGGGTGGTTATAAGTTAAATCCCTGGAATTAGGATTTTTTTTAAAAAAAAGAAAAGAAAAAAGAACAAGTTATTTTTGTGGATGGTGATGTTCTGCTTTACTTGGCAAGTTTAGTGGCAACCTTCGTTTAATCTGTCTCATGAAAATGTCAATGTCAGCTGTCCTCGAAACTTTTGGAAATAATTATATCCAACTTACAGGGATAGTCTGATACGATCCGTTTTCACTATTCCTGTTCCTGTGTCCTTCATACATAAATTAAGCTTTAACCTTGTGTCATCACCCTGTTTTGCTCATATAACCTGTCCGATACTCTCAGCTCTGAAGCTAACTCCTACCTTTGTGGCACACGCCTAACAGATTTCCTAAAGGTGCCCCATGGATTAGATACCATGGCAACTACAAAGGCCTTCACGTTGACCTTGTATGGCCTGGAAAAGATCCTGTTCTCGGTAAGTTGTCATCTATAATATGCTGCTCACCAGCTTGTTGTCAAGAATCAAGCAATAATTTGATAGGTTTCTTCATCATGTAATTCTTACAATTTATCCACAAACTAACCTTATTTCTTTCAGGAGTTGACTGTGTTGGCACGGTATCAGCAGCACTTGTGACTTATGCTTCTATTCAGTCATTGAAGCCAGATCTGATCATCAATGCTGGCACTGCTGGTGGGTTTAAGGTAATGTTTCAAGATATCACATGTTTGATGCCATGCTGTCGTTTTATTGTACCTGGGTTCTGATGTTGTTTCCCTTCTGGTCTTTCAGGCCAAAGGAGCAGACATTGGAGATGTCTACTTAGCATCCGATGTTGCATTCCACGATAGGAGAATACCTATCCCTGTGAGTGTTCTGTTATGTCTTGTAGTATTTTTTTTTTGTGGACCTAGTCCCATTTTTCTGCAGTGTGACCTTATTCAGTTCATTGATGTGCTACATTATTAGAATTCAGAAAGTCATACATGTCTTGAACAAAACATTGCTAGTTTTTATCTGTTTATTTCATAATCCAGTCCGTTTCATGGTTTTCTAATTCTACCTTCCTGCACCTGACAACTAATTATTTATAAACTTATAGTCTGCTTTACTCACTTGTGCTTCTGGTGACATCTGCTCCTTTGCCATTTATTCTCAAGATATTATATTTGCATCGCCATATTTTCTACAAGTTCTTTTTAGATAATCTATACACGTTTAATTGAGATGTTGACATGGACCTTCTTGGCTTATCCACAGGTCTTCGACATGTATGGAATTGGAACACGAAAAACATTTGCTACCCCTAATATATTGAAGGAACTCAATTTGAAGGTAAGCTACAGAGCTATGCTAGTTGATGCCAAACTGCTGGAATGAATACTGTGTGAGTCGTGCTTACATGCATATATCTTACTGTCTCCTTTAGCATGGTGTTGTTTCTGAAACGAATTTGTGGATTTTATTGGTAAACTGTAGCACTGTATAGACTCAACAAGATGAGTCGATCACATGCTAGTGTTCAACATTCCAGAAGTCATTGTGCCTTATTTGCTTCAGGTTGGGAAGCTCTCAACTGGCGATTCTCTAGATATGTCTCCCCATGACGAGTCAGCAATATTGAACAATGATGCTACAGTCAAGGATATGGAGGTATCTATTTACTTCTGCTCAAGCATTCAGCTTAAGAACATAGGCACACAACATGGAAATGGAGGTCTTCAACCATAGGTTCCTCTTGGAAGTTGGAATGAGTTCATCCTTTATGAACTTTAGGACAACTTTTACACATCTTGCATTTTGTGGGTCGTTATGGCATTGAAGTAGGCAAATGTCTATAGGAATATATTTTTATCCAACTAATTATTTGCTGATCTCTTCAGTTTTTTTGTTAATGCCTGAGTTCAAGTTAAATCGACTAGCATGAATAAGATACTTTGTGTGCACTGGTATTCATACGAAGTTATCTGCTGCTCTGCTTTGTTTTCAGTTGTAATTTGTAGGCTCAAACTGGCTTCGTTATTCTTGTTTTTCCAGGGAGCCGCGGTGGCATATGTTGCTGACATGTTTTCAACACCGGCAATCTTTGTGAAAGCTGTGACTGATATTGTTGATGGGGAGAAACCAACAGCCGAGGAGTTTCTGCAGAACCTGGTTGCTGTGACAGCAGCTCTGGACAAGGCAGTTACAGAAGTGGTTGATTTCATCAGTGGGAAATGCATATCGGATCTTTGAATGATGAAGCTTAGAAACCTGTTCATCAAATCCAAGCTCTGCTGCTTCAATGCACTATACTATACTACATCACTGCTGTATGATTTTTCATGGGGATGCGTATACAATTTTTAGGTTCCCCTGAGGCCCTGATCCCCCGTATGTACAAAATTCTTGGCAATTACTTGGATCAATGGCGTGGAATTTTGTAGAATATTCTGCAAAATGTGCAGTGTAATGAAACTAAATAAGGTGATATTCTGTCAAACTAAGATAAGTGGTGGGCGGTGGAGTTATTTTCTTAATAGAGCATTGAGACCATCTTCATTGTTTGCTCTACGATTGGTAAACTGTGAAAAAAAAACCCGAAGAAGCAATAAACATAGTTTACGTGTAGACCTTTTATGTTTGTATTCTTAGTGATTAAAAAACTCATGCTAGAGAATAAATACGATGCTATAAAATTCAAACAGTGGTGAAGAAAAAAAAGAAAAGAAAAACAATAAAACAAGAGGCAATCTGCTTCTCTCACTGTCTCTATGCACTAGAGGTAGAGGAGCAATTAAGCCTCGTGTTGTGATTGGTTGGCTGGTTGGTTAGTTGGCGCTTTTATCGTGGTGCCTGTTGGCATGCCTGAACCTGAAGAGTATAAATTGACTCCTGGTAGTTTTGCCATTGGTAGATACAGCCCTTGACTCTGCTGCCTCTTCAGTTCAGGTACCGCCCTCTCCTCTTCCTTTACTCTGCTCTCTTTTTCTTTATTTTTTTAGGACCCTTCTGCAGTAGTACTACATGTTTGTCCAGCTGCTGCTGCTGCTGCTGCTATCAGTTTCTTGTCCTTGTGATACATAATTCTGGTGTGAATCTTGCTCTCTACAAATTATTGTGCACATGAATCTTGCTCTTCAGTTCCTATGTTGCAAATTCTAGCACATTGCAAAAGGTTTTCGTCATGGCATGAACAGAAATAGTTTTGCAGTACATAATTTTGTCAAGTTTGCTGAAGAAGCTCTGAAAATTCCTTGCACATTTTACTAGGACAATCGATTTCCCTATTTTGTTTACAATGAATGGCAGATTGATCTTGTCAGATGGAGCTGGACACTGATCCTACCAAGCTGAAGGCCAAGCCCATCATCAAACCAAAAGTAGAACCCTGCGACGACGATGACGAGTTGCCGCCGCCGCCGCCGCCGCCGCCGGCTTCAGGATCCGGCGAGGATTGGGAGGCCACCACCCCTCTCGCCGCCGGCAACCCCTTCTTCACCGCCCTCATCGCCAAGTCTCATCTCCACCCCAAGTTCCAGATGGTAAGCATCACGGATTTATCGCTGGTATCTTCTTTTTCGAAAAGTTTGGACACCCAGAAATGATTTAGCACCAATGGAGTTAAAAAAGAAGCAATAAGATATTTTATCCTAGCACATCAAACATGGTGAAATTTTGATTAAGAGACTCGAACCTAGGCTGATAGTGCTTGCCATCCTAGCCACTGCACAATGAGCTCATCTCGACATTTTTTCTTTTCGAGTGTACTTCCTCTGTCTAAAAAAAAGACAACCTTTATGATGATTTGATAACATGTTCAGATTTATTATCCAGATTTATTATTTTAGATAGTATCAAATCCCCACATAGTTATCTTTTATTTGGGATGGAGGGAGTACGTGTATTAAAAAGGGAACACACTTATGGTGTGTGCATGCGTGGTGGTGATGAACATGCATGTGCATTCTTCATTTAATAAAAATGTTACTTATATCTTCGACTATCAATTTTTAAAAATTATTGTAGTTTAACATATACCTTATTGTATCATTAAGATTCACTACTATAAATACTTTCATAATATATAATTCACATATTGTTAAACTAGATAAATTTGTAAAAGTGATGTGCTAAGATAGAGCTTAGGACAAATGTAATAATTGGAAATGGAGGGAGTAATTAAACGGTTTTCTTTTAAGTTAAAGAGTACTCTCTCCATCCTTAAATAAGTGAGGTTTTAGCTATTTAAAGACATATTAAGAAATATGTTAAAAGACTACTACTATGTCCTTAATTGATATGGTGAGAAAACGAGGATAGAATACTATTGGTTCAGTTACTTAAAAATGAGAAGAAAACCACTCTAAAAATACATTCATGTAAAGATAAATTTTTAGCCTAAAGTTGCACTTGTTTAATTTACTCCTAATAATCATCATTATGTGGATAAGTATATCATCATGCATAATTAAATATATATATATATGTCTGTGCGGAATTGATTTGATTATTTAATTTGTCCGCGCGCGCGCACTAATATTATTTATATGCAGTGGATTCCACCTCGGTTCCAGCATCGGCTGGCGGAGCCGGAGGCGCGCACGGCGGCGGTGCTCCACTCCGGCGGCAAGTCGTGGGCGACGAGCTACTGCGGCCACCTCAAGATGAAGAAGCTGGACGCGGGATGGTCGGAGTTCGCGGTGGACAACCGGCTCCTGGTCGGGGACGCCTGCGTCTTCGAGCTCGTCGCCATGGGCGCCGCCGGAGGTCTGGAGTTCCAGGTGCAGATACTCCGCGGCGGCCTGCCGGCGGAGGTCGTCACCTCCAAGGGCCTCACCTCCGACCAACCCATCCTCATCGTCGACTAGCTTAGCTATCGATCTAGCCACAGTACTAAATCATCAAACTCCACTATTAATTCCACTGTCACTAGCTCGATCGGTAATTAAAGGCAAGGAGCTTTAATTTGGTGTCAAGCAAAAATTTATCCAACCAACTTATGTATGATGTACTGCAG

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CDS seq

ATGGCGCCGCCCTCCGACTCCGACGACTCGGCCCCGATCCCCGCCGGCGCCATCTCCAAGCTCCTCATCGTCATAGCGATGCAGACGGAGGCGCTCCCGCTCGTCAACAAGTTCCACCTCGTCGAGGCGGAGGAATCCATATTTCCTAAAGGTGCCCCATGGATTAGATACCATGGCAACTACAAAGGCCTTCACGTTGACCTTGTATGGCCTGGAAAAGATCCTGTTCTCGGAGTTGACTGTGTTGGCACGGTATCAGCAGCACTTGTGACTTATGCTTCTATTCAGTCATTGAAGCCAGATCTGATCATCAATGCTGGCACTGCTGGTGGGTTTAAGGCCAAAGGAGCAGACATTGGAGATGTCTACTTAGCATCCGATGTTGCATTCCACGATAGGAGAATACCTATCCCTGTCTTCGACATGTATGGAATTGGAACACGAAAAACATTTGCTACCCCTAATATATTGAAGGAACTCAATTTGAAGGGAGCCGCGGTGGCATATGTTGCTGACATGTTTTCAACACCGGCAATCTTTGTGAAAGCTGTGACTGATATTGTTGATGGGGAGAAACCAACAGCCGAGGAGTTTCTGCAGAACCTGGTTGCTGTGACAGCAGCTCTGGACAAGGCAGTTACAGAAGTGATGGAGCTGGACACTGATCCTACCAAGCTGAAGGCCAAGCCCATCATCAAACCAAAAGTAGAACCCTGCGACGACGATGACGAGTTGCCGCCGCCGCCGCCGCCGCCGCCGGCTTCAGGATCCGGCGAGGATTGGGAGGCCACCACCCCTCTCGCCGCCGGCAACCCCTTCTTCACCGCCCTCATCGCCAAGTCTCATCTCCACCCCAAGTTCCAGATGTGGATTCCACCTCGGTTCCAGCATCGGCTGGCGGAGCCGGAGGCGCGCACGGCGGCGGTGCTCCACTCCGGCGGCAAGTCGTGGGCGACGAGCTACTGCGGCCACCTCAAGATGAAGAAGCTGGACGCGGGATGGTCGGAGTTCGCGGTGGACAACCGGCTCCTGGTCGGGGACGCCTGCGTCTTCGAGCTCGTCGCCATGGGCGCCGCCGGAGGTCTGGAGTTCCAGGTGCAGATACTCCGCGGCGGCCTGCCGGCGGAGGTCGTCACCTCCAAGGGCCTCACCTCCGACCAACCCATCCTCATCGTCGACTAG

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Protein seq

MAPPSDSDDSAPIPAGAISKLLIVIAMQTEALPLVNKFHLVEAEESIFPKGAPWIRYHGNYKGLHVDLVWPGKDPVLGVDCVGTVSAALVTYASIQSLKPDLIINAGTAGGFKAKGADIGDVYLASDVAFHDRRIPIPVFDMYGIGTRKTFATPNILKELNLKGAAVAYVADMFSTPAIFVKAVTDIVDGEKPTAEEFLQNLVAVTAALDKAVTEVMELDTDPTKLKAKPIIKPKVEPCDDDDELPPPPPPPPASGSGEDWEATTPLAAGNPFFTALIAKSHLHPKFQMWIPPRFQHRLAEPEARTAAVLHSGGKSWATSYCGHLKMKKLDAGWSEFAVDNRLLVGDACVFELVAMGAAGGLEFQVQILRGGLPAEVVTSKGLTSDQPILIVD

Function B3 domain-containing protein Os06g0112300 [UniProtKB/Swiss-Prot:Q9LHY9]

Transcripts

Gene Transcript Chromosome Start End Strand Source
OsN22_06G000830 OsN22_06G000830_01 Chr06 588300 593585 + NAM
CDS seq

-

Protein seq

MAPPSDSDDSAPIPAGAISKLLIVIAMQTEALPLVNKFHLVEAEESIFPKGAPWIRYHGNYKGLHVDLVWPGKDPVLGVDCVGTVSAALVTYASIQSLKPDLIINAGTAGGFKAKGADIGDVYLASDVAFHDRRIPIPVFDMYGIGTRKTFATPNILKELNLKGAAVAYVADMFSTPAIFVKAVTDIVDGEKPTAEEFLQNLVAVTAALDKAVTEVMELDTDPTKLKAKPIIKPKVEPCDDDDELPPPPPPPPASGSGEDWEATTPLAAGNPFFTALIAKSHLHPKFQMWIPPRFQHRLAEPEARTAAVLHSGGKSWATSYCGHLKMKKLDAGWSEFAVDNRLLVGDACVFELVAMGAAGGLEFQVQILRGGLPAEVVTSKGLTSDQPILIVD

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Gene Transcript Chromosome Start End Strand Source
OsN22_06G000830 OsN22_06G000830_02 Chr06 588243 591070 + IsoSeq
CDS seq

-

Protein seq

TTRRRQQQQLGFREQPPIPWRRPPTPTTRPRSPPAPSPSSSS

Event Type Chromosome Start End Strand Alternative mRNAs Total mRNAs Source
SE Chr06 589921 590624 + OsN22_06G000830_02 OsN22_06G000830_01,OsN22_06G000830_02 All

Expression

Leaf Root Panicle
FPKM 0.193211 11.010090 3.914544

Homologues

Genome & Annotation Homologs Type Expression(FPKM)
Leaf Root Panicle
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) OsNip_06g0112300 RBH 0.0 0.000000 3.350599
Nipponbare | IRGSP 1.0 | MSU LOC_Os06g02230 RBH 0.0 0.000000 0.819435
Nipponbare | IRGSP 1.0 | RAP-db Os06g0112300 RBH None None None
Azucena | AzucenaRS1 | Gramene(+IsoSeq) OsAzu_06g0000870 RBH 0.715803 48.637211 6.203232
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) OsKeNa_06g0000870 RBH 0.397213 28.201725 2.937760
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) OsCMeo_06g0000840 RBH 0.000000 45.459435 7.899036
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) OsARC_06g0000840 RBH 0.217756 0.471615 None
PR 106 | Os127742RS1 | Gramene(+IsoSeq) OsPr106_06g0000830 RBH 2.676073 38.856663 11.276327
Minghui 63 | MH63RS3 | HZAU OsMH63_06G0010000 RBH 6.967654 23.045231 5.352061
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) OsIR64_06g0000800 RBH 0.371618 1.963022 0.647529
Zhenshan 97 | ZS97RS3 | HZAU OsZS97_06G0010700 RBH 12.9459445 14.325418 30.8163965
LIMA | Os127564RS1 | Gramene(+IsoSeq) OsLima_06g0000830 RBH 0.204744 0.448945 None
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) OsKYG_06g0000830 RBH 0.450093 12.401201 None
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) OsGoSa_06g0000850 RBH 1.572583 38.803329 None
LIU XU | Os125827RS1 | Gramene(+IsoSeq) OsLiXu_06g0000830 RBH 0.000000 0.744729 0.138834
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) OsLaMu_06g0000790 RBH 0.321957 16.337120 None
N22 | OsN22RS2 | Gramene(+IsoSeq) NA NA NA NA NA
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) OsNaBo_06g0000820 RBH 0.830929 33.549187 12.317363
Os XI: R9311 | R9311 | AGIS R9311C06g21482 RBH None None None
Os XI-adm: HZ | HZ | PKU OsHZ_06g0008900 RBH None None None
Os XI-adm: J4155S | J4155S | PKU OsJ4155_06g0008800 RBH None None None
Os XI-adm: LK638S | LK638S | PKU OsLK638S_06g0008700 RBH None None None
Os XI-adm: XL628S | XL628S | PKU OsXL628S_06g0008600 RBH None None None
Os GJ-temp: 02428 | 02428 | SICAU Os02428G0609574700.01 RBH None None None
Os cB: Basmati1 | Basmati1 | SICAU OsBasmati1G0620903700.01 RBH None None None
Os O.glaberrima: Ogla | OglaRS2 | DIADE Oglab_018028 RBH None None None
Os XI-1A: CN1 | CN1 | SICAU OsCN1G0618075700.01 RBH None None None
Os XI-1A: D62 | D62 | SICAU OsD62G0620020900.01 RBH None None None
Os XI-1A: DG | DG | SICAU OsDGG0611831700.01 RBH None None None
Os GJ-temp: DHX2 | DHX2 | SICAU OsDHX2G0613566900.01 RBH None None None
Os XI-adm: FH838 | FH838 | SICAU OsFH838G0615811700.01 RBH None None None
Os XI-1A: FS32 | FS32 | SICAU OsFS32G0613108300.01 RBH None None None
Os XI-1A: G46 | G46 | SICAU OsG46G0610597700.01 RBH None None None
Os XI-adm: G630 | G630 | SICAU OsG630G0609513900.01 RBH None None None
Os XI-1B: G8 | G8 | SICAU OsG8G0612827100.01 RBH None None None
Os XI-1A: II32 | II32 | SICAU OsII32G0619853700.01 RBH None None None
Os XI-1B: J4155 | J4155 | SICAU OsJ4155G0611929900.01 RBH None None None
Os GJ-temp: Kosh | Kosh | SICAU OsKoshG0613726700.01 RBH None None None
Os GJ-temp: KY131 | KY131 | SICAU OsKY131G0611657300.01 RBH None None None
Os GJ-trp: Lemont | Lemont | SICAU OsLemontG0609583100.01 RBH None None None
Os GJ-adm: LJ | LJ | SICAU OsLJG0609595500.01 RBH None None None
Os GJ-sbtrp: NamRoo | NamRoo | SICAU OsNamRooG0613496700.01 RBH None None None
Os XI-1B: R498 | R498 | SICAU OsR498G0611500500.01 RBH None None None
Os XI-1B: R527 | R527 | SICAU OsR527G0611856900.01 RBH None None None
Os XI-1B: S548 | S548 | SICAU OsS548G0625844100.01 RBH None None None
Os XI-2: TM | TM | SICAU TMG0615586300.01 RBH None None None
Os XI-3: Tumba | Tumba | SICAU OsTumbaG0611169900.01 RBH None None None
Os XI-adm: WSSM | WSSM | SICAU OsWSSMG0609586700.01 RBH None None None
Os XI-1B: Y3551 | Y3551 | SICAU OsY3551G0612802500.01 RBH None None None
Os XI-1B: Y58S | Y58S | SICAU OsY58SG0613113100.01 RBH None None None
Os XI-adm: YX1 | YX1 | SICAU OsYX1G0616453100.01 RBH None None None
Os GJ-temp: ZH11 | ZH11 | SICAU OsZH11G0611568300.01 RBH None None None
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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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