Basic Info

Gene ID OGI # | Score   Accession | Assembly | Annotation Location Links
OsZS97_05G0397100 OGI:05073440 | 2/16 Zhenshan 97 | ZS97RS3 | HZAU Chr05:25725496-25727136
Gene Symbol -
DNA seq

CTAAATGGAGTCGTACCCGCTAGGGGTTCTTGGCAAACCGGTGATGAAATCCATTCCGATCTCTTCCCATTTCCACTCGGGAATCGGTAGGGGTTGCAGCAGACCAGCTGGCCTCTGATGTTCTGCCTTGACTCTTTGGCAAATATCACACAAGGCAACGTATTCTGCGACGTCTCGCTTCATTCCAGCCCACCAGAAGTATGCCTTGATATCTTGGTACATCTTCGTACTTCCTGGATGAATGGAGTAGGCGGACTCATGAGCTTCCTTTAGGATGAGATCTCTTAACTCCTTCTTGGCCGGTACACAGATGCGTGGACCGCACCAAACTGTGCCTTGATCGTCTATGGAGAAATTGGTGTCTTTCTTCTCCTGTATTCTTTTTATTAACTCTTTTATCCCTTCGTCGTCTTTCTGAGCTTCCCGGATTTGCGACTCCAGGGTAGGCTGTACTGTCAAGCTGGCAGGGACACCTGATTGTATCACGGTCAGCCTTAACTTCTCCAATTCTCTGCACAGGCGATCTTGGTCAGGCCGTATTTGAGCTACATTGCAATAGGCCTTGCGACTTAGCGCATCAGCGACCACGTTAGCTTTACCGGGGTGGTAATGGATTCCAAGATCGTAATCCTTGATTAGTTCCAGCCATCTTCTCTGCCTCATATTTAACTCGGTTTGAGTGAAGATGTACTTAAGACTTTTGTGATCGGTGTATACTTCACATCTGTTCCCGATTAAATAGTGCCTCCAGATCTTAAGAGCATGAACCACGGCTGCCAACTCGAGATCATGGGTGGGATAATTGACTTCGTGAGGCCTGAGCTGCCTGGATGCATAGGCCACAACCTTTCGTTCTTGCATTAGGACACATCCTAAGCCTTGTCTTGAGGCATCACAGAAGATCTCGAAATCCTTTCGGATATCTGGCAAGGTGAGAACTGGGGCAGTGGTCAACCTTTTCTTCATTTCTTGAAAGCTGTCTTCACAGGCTGCAGACCATTGAAATTTCTTTTCCTTCTTTAACAGCTCAGTCATAGGTCTGGCTAGCTTAGAGAATCCTTCAATGAATCTGCGATAATATCCAGCTAAGCCAAGGAAGCTGCGAATCTCTGACACATTCTTGGGCGAGTTCAAAGCAAGTACAGCTTCAACCTTGCTGGGATCTACTTCGACACCGTTGGTGGAGATCACGTGTCCAAGAAATGCTACTCGGTCTAACCAGAATTCGCATTTCGAGAATTTAGCGAATAGTTGATGATCTCTGAGCTTTTCCATTATCAGCCTCAGGTGTTCGGCATGTTCTTCCTCGTTCTTGGAGTATATCAGGATGTCATCGATGAACACCACGACAAACTGGTCCAGGTATTCCATGAAGATTTTGTTCATTAAGTTCATGAAGAACGCTGGAGCATTGGTGAGTCCGAAGGACATCACTGTGAACTCATATAGACCATAACGCGTTGAGAAAGCGGTCTTCGGGATATCTTCAGATCTGATTTTTAGTTGGTGGTAACCTGATCTTAAGTCAATTTTTGAGAAAACTCTTGCTCCTTTAAGTTGATCGAACAAATCGTCAATCCGTGGCAACGGGTACTTGTTCTTTATAGTTACTTCATTCAGGGCTCTATAGTCGATTACCAT

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CDS seq

ATGGTAATCGACTATAGAGCCCTGAATGAAGTAACTATAAAGAACAAGTACCCGTTGCCACGGATTGACGATTTGTTCGATCAACTTAAAGGAGCAAGAGTTTTCTCAAAAATTGACTTAAGATCAGGTTACCACCAACTAAAAATCAGATCTGAAGATATCCCGAAGACCGCTTTCTCAACGCGTTATGGTCTATATGAGTTCACAGTGATGTCCTTCGGACTCACCAATGCTCCAGCGTTCTTCATGAACTTAATGAACAAAATCTTCATGGAATACCTGGACCAGTTTGTCGTGGTGTTCATCGATGACATCCTGATATACTCCAAGAACGAGGAAGAACATGCCGAACACCTGAGGCTGATAATGGAAAAGCTCAGAGATCATCAACTATTCGCTAAATTCTCGAAATGCGAATTCTGGTTAGACCGAGTAGCATTTCTTGGACACGTGATCTCCACCAACGGTGTCGAAGTAGATCCCAGCAAGGTTGAAGCTGTACTTGCTTTGAACTCGCCCAAGAATGTGTCAGAGATTCGCAGCTTCCTTGGCTTAGCTGGATATTATCGCAGATTCATTGAAGGATTCTCTAAGCTAGCCAGACCTATGACTGAGCTGTTAAAGAAGGAAAAGAAATTTCAATGGTCTGCAGCCTGTGAAGACAGCTTTCAAGAAATGAAGAAAAGGTTGACCACTGCCCCAGTTCTCACCTTGCCAGATATCCGAAAGGATTTCGAGATCTTCTGTGATGCCTCAAGACAAGGCTTAGGATGTGTCCTAATGCAAGAACGAAAGGTTGTGGCCTATGCATCCAGGCAGCTCAGGCCTCACGAAGTCAATTATCCCACCCATGATCTCGAGTTGGCAGCCGTGGTTCATGCTCTTAAGATCTGGAGGCACTATTTAATCGGGAACAGATGTGAAGTATACACCGATCACAAAAGTCTTAAGTACATCTTCACTCAAACCGAGTTAAATATGAGGCAGAGAAGATGGCTGGAACTAATCAAGGATTACGATCTTGGAATCCATTACCACCCCGGTAAAGCTAACGTGGTCGCTGATGCGCTAAGTCGCAAGGCCTATTGCAATGTAGCTCAAATACGGCCTGACCAAGATCGCCTGTGCAGAGAATTGGAGAAGTTAAGGCTGACCGTGATACAATCAGGTGTCCCTGCCAGCTTGACAGTACAGCCTACCCTGGAGTCGCAAATCCGGGAAGCTCAGAAAGACGACGAAGGGATAAAAGAGTTAATAAAAAGAATACAGGAGAAGAAAGACACCAATTTCTCCATAGACGATCAAGGCACAGTTTGGTGCGGTCCACGCATCTGTGTACCGGCCAAGAAGGAGTTAAGAGATCTCATCCTAAAGGAAGCTCATGAGTCCGCCTACTCCATTCATCCAGGAAGTACGAAGATGTACCAAGATATCAAGGCATACTTCTGGTGGGCTGGAATGAAGCGAGACGTCGCAGAATACGTTGCCTTGTGTGATATTTGCCAAAGAGTCAAGGCAGAACATCAGAGGCCAGCTGGTCTGCTGCAACCCCTACCGATTCCCGAGTGGAAATGGGAAGAGATCGGAATGGATTTCATCACCGGTTTGCCAAGAACCCCTAGCGGGTACGACTCCATTTAG

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Protein seq

MVIDYRALNEVTIKNKYPLPRIDDLFDQLKGARVFSKIDLRSGYHQLKIRSEDIPKTAFSTRYGLYEFTVMSFGLTNAPAFFMNLMNKIFMEYLDQFVVVFIDDILIYSKNEEEHAEHLRLIMEKLRDHQLFAKFSKCEFWLDRVAFLGHVISTNGVEVDPSKVEAVLALNSPKNVSEIRSFLGLAGYYRRFIEGFSKLARPMTELLKKEKKFQWSAACEDSFQEMKKRLTTAPVLTLPDIRKDFEIFCDASRQGLGCVLMQERKVVAYASRQLRPHEVNYPTHDLELAAVVHALKIWRHYLIGNRCEVYTDHKSLKYIFTQTELNMRQRRWLELIKDYDLGIHYHPGKANVVADALSRKAYCNVAQIRPDQDRLCRELEKLRLTVIQSGVPASLTVQPTLESQIREAQKDDEGIKELIKRIQEKKDTNFSIDDQGTVWCGPRICVPAKKELRDLILKEAHESAYSIHPGSTKMYQDIKAYFWWAGMKRDVAEYVALCDICQRVKAEHQRPAGLLQPLPIPEWKWEEIGMDFITGLPRTPSGYDSI

Function Transposon Tf2-6 polyprotein [UniProtKB/Swiss-Prot:P0CT39]

Transcripts

Gene Transcript Chromosome Start End Strand Source
OsZS97_05G0397100 OsZS97_05T0397100-mRNA-1 Chr05 25725496 25727136 - makerRMon
CDS seq

ATGGTAATCGACTATAGAGCCCTGAATGAAGTAACTATAAAGAACAAGTACCCGTTGCCACGGATTGACGATTTGTTCGATCAACTTAAAGGAGCAAGAGTTTTCTCAAAAATTGACTTAAGATCAGGTTACCACCAACTAAAAATCAGATCTGAAGATATCCCGAAGACCGCTTTCTCAACGCGTTATGGTCTATATGAGTTCACAGTGATGTCCTTCGGACTCACCAATGCTCCAGCGTTCTTCATGAACTTAATGAACAAAATCTTCATGGAATACCTGGACCAGTTTGTCGTGGTGTTCATCGATGACATCCTGATATACTCCAAGAACGAGGAAGAACATGCCGAACACCTGAGGCTGATAATGGAAAAGCTCAGAGATCATCAACTATTCGCTAAATTCTCGAAATGCGAATTCTGGTTAGACCGAGTAGCATTTCTTGGACACGTGATCTCCACCAACGGTGTCGAAGTAGATCCCAGCAAGGTTGAAGCTGTACTTGCTTTGAACTCGCCCAAGAATGTGTCAGAGATTCGCAGCTTCCTTGGCTTAGCTGGATATTATCGCAGATTCATTGAAGGATTCTCTAAGCTAGCCAGACCTATGACTGAGCTGTTAAAGAAGGAAAAGAAATTTCAATGGTCTGCAGCCTGTGAAGACAGCTTTCAAGAAATGAAGAAAAGGTTGACCACTGCCCCAGTTCTCACCTTGCCAGATATCCGAAAGGATTTCGAGATCTTCTGTGATGCCTCAAGACAAGGCTTAGGATGTGTCCTAATGCAAGAACGAAAGGTTGTGGCCTATGCATCCAGGCAGCTCAGGCCTCACGAAGTCAATTATCCCACCCATGATCTCGAGTTGGCAGCCGTGGTTCATGCTCTTAAGATCTGGAGGCACTATTTAATCGGGAACAGATGTGAAGTATACACCGATCACAAAAGTCTTAAGTACATCTTCACTCAAACCGAGTTAAATATGAGGCAGAGAAGATGGCTGGAACTAATCAAGGATTACGATCTTGGAATCCATTACCACCCCGGTAAAGCTAACGTGGTCGCTGATGCGCTAAGTCGCAAGGCCTATTGCAATGTAGCTCAAATACGGCCTGACCAAGATCGCCTGTGCAGAGAATTGGAGAAGTTAAGGCTGACCGTGATACAATCAGGTGTCCCTGCCAGCTTGACAGTACAGCCTACCCTGGAGTCGCAAATCCGGGAAGCTCAGAAAGACGACGAAGGGATAAAAGAGTTAATAAAAAGAATACAGGAGAAGAAAGACACCAATTTCTCCATAGACGATCAAGGCACAGTTTGGTGCGGTCCACGCATCTGTGTACCGGCCAAGAAGGAGTTAAGAGATCTCATCCTAAAGGAAGCTCATGAGTCCGCCTACTCCATTCATCCAGGAAGTACGAAGATGTACCAAGATATCAAGGCATACTTCTGGTGGGCTGGAATGAAGCGAGACGTCGCAGAATACGTTGCCTTGTGTGATATTTGCCAAAGAGTCAAGGCAGAACATCAGAGGCCAGCTGGTCTGCTGCAACCCCTACCGATTCCCGAGTGGAAATGGGAAGAGATCGGAATGGATTTCATCACCGGTTTGCCAAGAACCCCTAGCGGGTACGACTCCATTTAG

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Protein seq

MVIDYRALNEVTIKNKYPLPRIDDLFDQLKGARVFSKIDLRSGYHQLKIRSEDIPKTAFSTRYGLYEFTVMSFGLTNAPAFFMNLMNKIFMEYLDQFVVVFIDDILIYSKNEEEHAEHLRLIMEKLRDHQLFAKFSKCEFWLDRVAFLGHVISTNGVEVDPSKVEAVLALNSPKNVSEIRSFLGLAGYYRRFIEGFSKLARPMTELLKKEKKFQWSAACEDSFQEMKKRLTTAPVLTLPDIRKDFEIFCDASRQGLGCVLMQERKVVAYASRQLRPHEVNYPTHDLELAAVVHALKIWRHYLIGNRCEVYTDHKSLKYIFTQTELNMRQRRWLELIKDYDLGIHYHPGKANVVADALSRKAYCNVAQIRPDQDRLCRELEKLRLTVIQSGVPASLTVQPTLESQIREAQKDDEGIKELIKRIQEKKDTNFSIDDQGTVWCGPRICVPAKKELRDLILKEAHESAYSIHPGSTKMYQDIKAYFWWAGMKRDVAEYVALCDICQRVKAEHQRPAGLLQPLPIPEWKWEEIGMDFITGLPRTPSGYDSI

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Event Type Chromosome Start End Strand Alternative mRNAs Total mRNAs Source

Expression

Leaf Root Panicle
FPKM 0 0 0

Homologues

Genome & Annotation Homologs Type Expression(FPKM)
Leaf Root Panicle
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) OsNip_09g0375700 SBH 0.000000 0.0 0.0
Nipponbare | IRGSP 1.0 | MSU LOC_Os05g46810 RBH 0.0 0.0 0.0
Nipponbare | IRGSP 1.0 | RAP-db Os09g0375700 SBH None None None
Azucena | AzucenaRS1 | Gramene(+IsoSeq) NA NA NA NA NA
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) NA NA NA NA NA
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) NA NA NA NA NA
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) NA NA NA NA NA
PR 106 | Os127742RS1 | Gramene(+IsoSeq) NA NA NA NA NA
Minghui 63 | MH63RS3 | HZAU OsMH63_05G0457100 SBH 0 0 0
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) NA NA NA NA NA
Zhenshan 97 | ZS97RS3 | HZAU OsZS97_11G0029600 SBH 0 0 0
LIMA | Os127564RS1 | Gramene(+IsoSeq) NA NA NA NA NA
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) NA NA NA NA NA
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) NA NA NA NA NA
LIU XU | Os125827RS1 | Gramene(+IsoSeq) NA NA NA NA NA
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) NA NA NA NA NA
N22 | OsN22RS2 | Gramene(+IsoSeq) NA NA NA NA NA
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) NA NA NA NA NA
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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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