Basic Info

Gene ID OGI # | Score   Accession | Assembly | Annotation Location Links
OsZS97_05G0372100 OGI:05063700 | 16/16 Zhenshan 97 | ZS97RS3 | HZAU Chr05:24191721-24196967
Gene Symbol CIPK28, OsCIPK28, OsSnRK3.18, SnRK3.18, SNRK3.19, OsSnRK3.19, SnRK3.19
DNA seq

ATGGAGAGCGCGAGCGTGTACGCCATACGTGCCCGGCCATTGCGGCTTATATATATGTATTTTGCACATGTTGTTGATATGCAATCTTGTTTTGAGCAGCATATGACACGATGTTTGGGAGGCCCGGTTTTCACGTGATTGTCATATAAGATAATGAGAATCAGATCGATTGTTTCCTGATGAAATCAGGATGGGGCCGGCAAAAAATATATTTGCTGGAGTGGTGAGATAAAAATATGCAGTATAAATCATTGTGTTCTCATAAGGTCTAGTGATGGCGTAAAAGATTGATCTGGTTATATATTTTGTTGGAGATGTCAAATGAATATTTATAATCTATATACTTCCTCCGTTTTACAATGTAAGAATTTCTAGCATTACCCACATACATATAGATGTTAATGAATCTAAACACATACATATGTCTAGATTCATTAACATTTAAATGAATATGAACAATGTTAGAAAGTCTTACATTATGAAACGTATAAAGTACTTTAAAAGGCTCCAATGGTGATGGTGACAGTAATATATCTGTTACCACCCACTAATTAAGCACTCCATTGTCAGTTTTTGTAACTTTGAGCTTCAAAGCTTTAGCCAGTTCCTTCAGCTTCACAAGTACAATTGTAGCTGGCTTTCTGGATTTAAACCGTGCCTCTCTTTGACCATACCTTTCACTAAATAAAACAGATATATCGAATCTAGTAGAGAGAGAAATGATGCAATGCATTCAACTTGTGCAGGTTTGGTGGCTCTTGATTTCTCTCAGAACTGATGCAGGTTGTTGGGCCAGAGAAAGGAGCCTCACTTGTACAACTCTTCTTTCCTGTTTCGCTATTCAGTACAGATATGGCGATGGGTTTCCTATACCAAGCACTTCTCTTTATCCTTGAGATAGATATCCTAGTACTAGGATCAGTATCAAGGATTCCATAAAGGAGCTCCTTCAGCTCAGCTGAAAAATGACGAGGGCATCTATACTCAGCCTTTGCAATCTTCCTATACATATTGGAAAGGAAGATAATTGGCCACAAGCACAAACAAAATCACTCCACAAGACCACACATATGCCATTGAGCCATTGTAGCCTTTCCTACTAAGCACTTCTAGAGCAACATAAGCTGGAGTTCCACATGCGGTGTGGAAAAGACCATCTTGCCTCCTTGATTCGGCTAGCGCAAATAATCCAAAGTCAGAGACTTTAAGAGTTTCATTCTCATCCAGCAATAAGTTTTCCGGCTTCAAGTCACGATGATAAACACCTTGTGTGTGACTTTAAGAGTATCATTCTTGGATGATAAACACCTCGGCTAACGATGATATTGCCACAACGGAGGTGTTTATCAAAGTGACTTAAAGTCGGAAAACTTACTGCAAGATGAGAATGAAAATCTTAAAGTATTTGACTTTGGATTAAGAGCGTTAGCCGAATCAAGGAGGCTTGATGGTCTTCTCCACACCGCATGTGGAACTCCAGCTTATATTGCTCCAGAGGTGCTCAGTAGGAAAGGCAACAGTGGCTCAAAGGCAAATGTGTGGTCTTGTGGAGTGATTTTGTTTGTGCTTGTGGCAAATTATCTTCCTTTCCATGATAGAAATCTCATAGAAATGTGTAGGAATATCACAAAGGCTGAGTACAAATGCCCTCGTCATTTTTAGGCTGAGCTGAAGGAGCTTCTTTATGGAATCCTAGATCCTGATCCTAGTACTAGGATGTCTATCTCAAGGATAAAGAGAAGTGCTTGGTATAGGTAGCCCATCTCCATATCTGCACTGAACAGCGAAACAGGAAAGAAGAGTTGTATAAGTGAGGCTCCTTGCATCAGTTCTAGGAGAAATCAAGAGCCACCAAACCTACACAACTTGATGCATTTGAAATCATTTCTCTCTCTATTGGGTTCGATCTATCAGGTTTATTTGGTGAAAGGTATGGCTGAAGAGAGGCAAGATTTACATCTAGAAAGCCAGTTGCTACTGTACTTGTGAAGCTGAAGGAACTGACCAAAGCCTTGAAGCTCAAAGTTACAAAAACTGACAATGAAGTGCTTAAATTACCCACGACGAAGGAAGGAAGGAAAGGCAGACTTGAGCTTGATGTAGTGGTTTTTCTGAGGTTGCTCCTTCTTTTCTCTTCGTTGAGTTGAAGAAGACCAATGGTGACACATTGGAGTATCAAAGGCAGGTGAAAGAGAACATTAGGCCATCACTCAAGGATATTATTTGGTCATGGCAAGGTGATCAACAGTAGTCACTGCATGCTGCATCATGCACCTCTGTCGCCAACTTACCATCTCCACAAAGAAAAGACAGGACTAATTGTGAATGTTTTGTTTTTTCCCCTCCATCCCCATCACAAACCAAGCTAAAATCATGGAATGTCAATAAAATCGAAGGCACGTTTTGTCCTATTGACATGGGCCATAGATTAGAGAATTTATCTATAGTTCTTGCATAAATGAGTAACATGGAAGCTTCATCATTTCTGATGTTTCTTTCTTCCCCATCCCCCAAGTTCTGAGCACTGCAAAATGTGTCGGCTGGCCTGTTATGTAAGGAAACTCTATCGAGCTGCCAAATGATGAATTGACAGTCCAATGTAGTGAAGGTGAAGCACAGAAGCAATCAAGGCTACCAAGTATCAAGGTTAAGGTGTTCTGTTGTGCATTTAATCTCCCTACTTGGTGTGAATCAAGTGTGATCAAGATGGCCAACTACTAGTAGGAAGTTGTACTGAAAATTGCGGCTATCTCAACGGAAGCAGCAAATATGACCAACGCCAAGTTTGATAATGGCATGTTGGCCTTTTCTCAGTAGAGTGGTTGGTAACATAGTAACACTCTTCTTATTCCACTGGTAGAGTGGCTGGATAAGATTGAAACTCTTAAATTTTCTGACTTTGGATTAAGTGCGTTAGCTGAATCAAGGAGGTAAGATGCTCTTCTCCACACCGCATGTGGAACTCCAATTTATGTTGCTCTAGAAGTGCTTAGTAGGAAAGGCTACAGTGGCTCAAAGGCATATGTGTGGTTTTGTGGAGTGATTCTGTTTGTACTTGTGGCCAATTATCTTCTTTTCCATCATTGAAATCTCATAGAAATGTATAGGAAGATCGCAAAGGCTGAGTACAGATGCCCTCGTCATTTTTCGGCTGAGTTGAAGGAGCTCCTTTATGGAATCCTTGATCCTGATCCTAGTACTAGGATGTCTAGATCAACTTCTCAAGGATAAAGAGAAGTGCTTGGTATATGAAACCTATCGCCATATCTGCACTGAACAACGAAACAGGAAAGAAGAGTTGTACAAGTGAGGCTCCTTTCTCTGGCCCAACAACCTGCATCAGTTCTGAGAGAAATCAGGAGCCACCAAATCTGCACAACTTGAATGCATTCGACATCATTTCACTCTCTACTGGATTCGATCGATCAGGTTTATTTGGTGAAAGGTATGGTCGAAGAAAGGCACGGTTTAAATGATGCATCAACATTAAATTTCATGTTGTATGTGTCGAAAAAAAAAGAACCGTTGTATTTCAATGTTTCTATCGAACATTGCTTTTTGCTACTACTTGGAAGGAGCCACAAAAACAAGATATGCATCCCGATGCGATTCAATTGCTCGCATCAGATATTTGGACATCCATTTTTGTCACATGCAAAGATATATTCTCTTTAGTTCTTTTCTCCGTCCTATGTCAGAGGAGTTTCTAGCCATCATGGATTCCAGTTGTAGCTGTCTCGTTCGGTGAAGCTTCAGTTCTGATATTTGATCACAGCTACACCGCATGTACTGAATCTATGGGAAACCTCTTCCCTTCCCATTGTATCGTTAGTGATTTTAAATCAAATGTACTGCATTTTTCCACGGATGTGAGAAAATTGGATTCTTCTGGAATTGGATGCCATCGATCCACAATTGTAGCGTCTAAAAAAATGTCTTCTTGATGTTTCCGATTCGTGTAATACTTGTGATGCAGCCATTTGCGTTATAGATATTGGACTAATCTTCCATTCTTGGCCTGTTCATTTTTCCGGTAGCATCTTGGTGAAGACTGAAAGTTATTCACCTGGAAATGCAGAGATATGTGCCAGTCAGTAACACTCTGTAGATTGTAGACCCATTTTTAATTTCGGCGTGGCGCTAATATAATGGAAGATAGGAGTGTGTTGATGGAACGGTATGAAATTGGGAGACAATTAGGGCAAGGGACCTTTGGAAAGGTTTACTATGCTCGTAATCTTAGTTCTGGTCACTCCGTTGCAATAAAGATGATTGATAAGGAGATAATTATGAAAGTTAGCCTCGTGGAGCAGATAAAGAGGGAGATCTCCATAATGAGATTAGTGAGGCATCCAAATATTCTCCAGCTCTTTGAGGTAATGGCTACCAACAGCAAGATTTACTTTGCTTTGGAGTATGCCAAGAGTGGCAAGCTTTTCCACAAAATGGCTAGGGCAAAGCTCAATGAGGAGTCAGCGATAAAGTATTTTCAACAGTTGATCTCTGCAGTGAACTATTGCCACAACTGAGGTGTTTATCATCGTGACTTGAAGACGGAAAACTTACTGCTAGATGAGAATGAAACTCTTAAAGTCTCTAACTTTGGATTAAGTGCGTTACCCGAATCAAGGAGGCAAGATGGTCTTCTCCACACCGCATGTGGAACTCCAGCTTATGTTGCAGTGGCTCAAAGGCAGATGTATGGTCTTGTGGAGTGATTTTGTTTGTGCTTGTGGCCAATCATCTTCCTGAAATTTCATAGAAATGTATAGGAAGATCACAAAGGCTGAGTACAGATGCCCTCGTCATTTTTCGGCTGAGCTGAAGGAGCTCCTTTATGGAATCCTTGATCCTGATCCTAGTACTAGGATGTCTATCTTAAGGATAAAGATAAGTGCTTGGTACAAGAAACCCATCGCCATATCTGCACTGAACAGCGAAACAAGAAAGAAGAGTTGTATAAGTGAGGCTCCTTTCTCTGGCCCAACAACCTGCATCAGTTCTGAGAGAAATCAAGAGCCACCAAACCTGCACAACTTGAATGCATTTGACATCATTTCTCTCTATACTGGATTCGATCTATCAGGTTTATTTGGTGAAAGGTATGGCTGGAGAGAGGCACGGTTTTCATCCAGAGTGCCAGCTGCAGCTGTACTTGTGAAGCTGAAGGAACCAGCCAAATCCTTGAATCTCAAAGTTACAAAAACTGACAATGGAGTGCTTAAATTAGCCATGACAAAGGAATGA

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CDS seq

ATGGAGAGCGCGAGCGTAGCGTTAGCCGAATCAAGGAGGCTTGATGGTCTTCTCCACACCGCATGTGGAACTCCAGCTTATATTGCTCCAGAGGTGCTCAGTAGGAAAGGCAACAGTGGCTCAAAGGCAAATGAGAAATCAAGAGCCACCAAACCTACACAACTTGATGCATTTGAAATCATTTCTCTCTCTATTGGGTTCGATCTATCAGGTTTATTTGAGGCAAGATTTACATCTAGAAAGCCAGTTGCTACTGTACTTGTGAAGCTGAAGGAACTGACCAAAGCCTTGAAGCTCAAAGTTACAAAAACTGACAATGAAGTGCTTAAATTACCCACGACGAAGGAAGGAAGGAAAGGCAGACTTGAGCTTGATGTAGTGTTGAAGAAGACCAATGGTGACACATTGGAGTATCAAAGGCAGGTGAAAGAGAACATTAGGCCATCACTCAAGGATATTATTTGGTCATGGCAAGGAAACTCTATCGAGCTGCCAAATGATGAATTGACAGTCCAATGTAGTGAAGGTGAAGCACAGAAGCAATCAAGGCTACCAAGTATCAAGGTTAAGGAGGTAAGATGCTCTTCTCCACACCGCATGTGGAACTCCAATTTATGCTACAGTGGCTCAAAGGCATATATCAACTTCTCAAGGATAAAGAGAAGTGCTTGGTATATGAAACCTATCGCCATATCTGCACTGAACAACGAAACAGGAAAGAAGAGTTGTACAAGTGAGGCTCCTTTCTCTGGCCCAACAACCTGCATCAGTTCTGAGAGAAATCAGGAGCCACCAAATCTGCACAACTTGAATGCATTCGACATCATTTCACTCTCTACTGGATTCGATCGATCAGGTTTATTTGGTGAAAGCATCTTGGTGAAGACTGAAAGTTATTCACCTGGAAATGCAGAGATATGTGCCAATAGGAGTGTGTTGATGGAACGGTATGAAATTGGGAGACAATTAGGGCAAGGGACCTTTGGAAAGGTTTACTATGCTCGTAATCTTAGTTCTGGTCACTCCGTTGCAATAAAGATGATTGATAAGGAGATAATTATGAAAGTTAGCCTCGTGGAGCAGATAAAGAGGGAGATCTCCATAATGAGATTAGTGAGGCATCCAAATATTCTCCAGCTCTTTGAGGTAATGGCTACCAACAGCAAGATTTACTTTGCTTTGGAGTATGCCAAGAGTGGCAAGCTTTTCCACAAAATGGCTAGGGCAAAGCTCAATGAGGAGTCAGCGATAAAGAAGATCACAAAGGCTGAGTACAGATGCCCTCGTCATTTTTCGGCTGAGCTGAAGGAGCTCCTTTATGGAATCCTTGATCCTGATCCTAGTACTAGGATGTCTATCTTAAGGATAAAGATAAGTGCTTGGTACAAGAAACCCATCGCCATATCTGCACTGAACAGCGAAACAAGAAAGAAGAGTTGTATAAGTGAGGCTCCTTTCTCTGGCCCAACAACCTGCATCAGTTCTGAGAGAAATCAAGAGCCACCAAACCTGCACAACTTGAATGCATTTGACATCATTTCTCTCTATACTGGATTCGATCTATCAGGTTTATTTGGTGAAAGGTATGGCTGGAGAGAGGCACGGTTTTCATCCAGAGTGCCAGCTGCAGCTGTACTTGTGAAGCTGAAGGAACCAGCCAAATCCTTGAATCTCAAAGTTACAAAAACTGACAATGGAGTGCTTAAATTAGCCATGACAAAGGAATGA

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Protein seq

MESASVALAESRRLDGLLHTACGTPAYIAPEVLSRKGNSGSKANEKSRATKPTQLDAFEIISLSIGFDLSGLFEARFTSRKPVATVLVKLKELTKALKLKVTKTDNEVLKLPTTKEGRKGRLELDVVLKKTNGDTLEYQRQVKENIRPSLKDIIWSWQGNSIELPNDELTVQCSEGEAQKQSRLPSIKVKEVRCSSPHRMWNSNLCYSGSKAYINFSRIKRSAWYMKPIAISALNNETGKKSCTSEAPFSGPTTCISSERNQEPPNLHNLNAFDIISLSTGFDRSGLFGESILVKTESYSPGNAEICANRSVLMERYEIGRQLGQGTFGKVYYARNLSSGHSVAIKMIDKEIIMKVSLVEQIKREISIMRLVRHPNILQLFEVMATNSKIYFALEYAKSGKLFHKMARAKLNEESAIKKITKAEYRCPRHFSAELKELLYGILDPDPSTRMSILRIKISAWYKKPIAISALNSETRKKSCISEAPFSGPTTCISSERNQEPPNLHNLNAFDIISLYTGFDLSGLFGERYGWREARFSSRVPAAAVLVKLKEPAKSLNLKVTKTDNGVLKLAMTKE

Function CBL-interacting protein kinase 28 [UniProtKB/Swiss-Prot:A3B529]

Transcripts

Gene Transcript Chromosome Start End Strand Source
OsZS97_05G0372100 OsZS97_05T0372100.1 Chr05 24191721 24196967 + makerRMon
CDS seq

ATGGAGAGCGCGAGCGTAGCGTTAGCCGAATCAAGGAGGCTTGATGGTCTTCTCCACACCGCATGTGGAACTCCAGCTTATATTGCTCCAGAGGTGCTCAGTAGGAAAGGCAACAGTGGCTCAAAGGCAAATGAGAAATCAAGAGCCACCAAACCTACACAACTTGATGCATTTGAAATCATTTCTCTCTCTATTGGGTTCGATCTATCAGGTTTATTTGAGGCAAGATTTACATCTAGAAAGCCAGTTGCTACTGTACTTGTGAAGCTGAAGGAACTGACCAAAGCCTTGAAGCTCAAAGTTACAAAAACTGACAATGAAGTGCTTAAATTACCCACGACGAAGGAAGGAAGGAAAGGCAGACTTGAGCTTGATGTAGTGTTGAAGAAGACCAATGGTGACACATTGGAGTATCAAAGGCAGGTGAAAGAGAACATTAGGCCATCACTCAAGGATATTATTTGGTCATGGCAAGGAAACTCTATCGAGCTGCCAAATGATGAATTGACAGTCCAATGTAGTGAAGGTGAAGCACAGAAGCAATCAAGGCTACCAAGTATCAAGGTTAAGGAGGTAAGATGCTCTTCTCCACACCGCATGTGGAACTCCAATTTATGCTACAGTGGCTCAAAGGCATATATCAACTTCTCAAGGATAAAGAGAAGTGCTTGGTATATGAAACCTATCGCCATATCTGCACTGAACAACGAAACAGGAAAGAAGAGTTGTACAAGTGAGGCTCCTTTCTCTGGCCCAACAACCTGCATCAGTTCTGAGAGAAATCAGGAGCCACCAAATCTGCACAACTTGAATGCATTCGACATCATTTCACTCTCTACTGGATTCGATCGATCAGGTTTATTTGGTGAAAGCATCTTGGTGAAGACTGAAAGTTATTCACCTGGAAATGCAGAGATATGTGCCAATAGGAGTGTGTTGATGGAACGGTATGAAATTGGGAGACAATTAGGGCAAGGGACCTTTGGAAAGGTTTACTATGCTCGTAATCTTAGTTCTGGTCACTCCGTTGCAATAAAGATGATTGATAAGGAGATAATTATGAAAGTTAGCCTCGTGGAGCAGATAAAGAGGGAGATCTCCATAATGAGATTAGTGAGGCATCCAAATATTCTCCAGCTCTTTGAGGTAATGGCTACCAACAGCAAGATTTACTTTGCTTTGGAGTATGCCAAGAGTGGCAAGCTTTTCCACAAAATGGCTAGGGCAAAGCTCAATGAGGAGTCAGCGATAAAGAAGATCACAAAGGCTGAGTACAGATGCCCTCGTCATTTTTCGGCTGAGCTGAAGGAGCTCCTTTATGGAATCCTTGATCCTGATCCTAGTACTAGGATGTCTATCTTAAGGATAAAGATAAGTGCTTGGTACAAGAAACCCATCGCCATATCTGCACTGAACAGCGAAACAAGAAAGAAGAGTTGTATAAGTGAGGCTCCTTTCTCTGGCCCAACAACCTGCATCAGTTCTGAGAGAAATCAAGAGCCACCAAACCTGCACAACTTGAATGCATTTGACATCATTTCTCTCTATACTGGATTCGATCTATCAGGTTTATTTGGTGAAAGGTATGGCTGGAGAGAGGCACGGTTTTCATCCAGAGTGCCAGCTGCAGCTGTACTTGTGAAGCTGAAGGAACCAGCCAAATCCTTGAATCTCAAAGTTACAAAAACTGACAATGGAGTGCTTAAATTAGCCATGACAAAGGAATGA

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Protein seq

MESASVALAESRRLDGLLHTACGTPAYIAPEVLSRKGNSGSKANEKSRATKPTQLDAFEIISLSIGFDLSGLFEARFTSRKPVATVLVKLKELTKALKLKVTKTDNEVLKLPTTKEGRKGRLELDVVLKKTNGDTLEYQRQVKENIRPSLKDIIWSWQGNSIELPNDELTVQCSEGEAQKQSRLPSIKVKEVRCSSPHRMWNSNLCYSGSKAYINFSRIKRSAWYMKPIAISALNNETGKKSCTSEAPFSGPTTCISSERNQEPPNLHNLNAFDIISLSTGFDRSGLFGESILVKTESYSPGNAEICANRSVLMERYEIGRQLGQGTFGKVYYARNLSSGHSVAIKMIDKEIIMKVSLVEQIKREISIMRLVRHPNILQLFEVMATNSKIYFALEYAKSGKLFHKMARAKLNEESAIKKITKAEYRCPRHFSAELKELLYGILDPDPSTRMSILRIKISAWYKKPIAISALNSETRKKSCISEAPFSGPTTCISSERNQEPPNLHNLNAFDIISLYTGFDLSGLFGERYGWREARFSSRVPAAAVLVKLKEPAKSLNLKVTKTDNGVLKLAMTKE

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Event Type Chromosome Start End Strand Alternative mRNAs Total mRNAs Source

Expression

Leaf Root Panicle
FPKM 0 0 0

Homologues

Genome & Annotation Homologs Type Expression(FPKM)
Leaf Root Panicle
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) OsNip_05g0476466 SBH 0.0 0.0 0.0
Nipponbare | IRGSP 1.0 | MSU LOC_Os05g39890 RBH 0.0 0.0 0.0
Nipponbare | IRGSP 1.0 | RAP-db Os05g0476466 SBH None None None
Azucena | AzucenaRS1 | Gramene(+IsoSeq) OsAzu_05g0020770 RBH 0.0 0.0 0.0
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) OsKeNa_05g0020720 RBH 0.0 0.0 0.0
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) OsCMeo_05g0020600 RBH 0.0 0.0 0.0
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) OsARC_05g0020600 RBH 0.0 0.0 None
PR 106 | Os127742RS1 | Gramene(+IsoSeq) OsPr106_05g0020710 RBH 0.0 0.0 0.0
Minghui 63 | MH63RS3 | HZAU OsMH63_05G0362700 RBH 0 0 0
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) OsIR64_05g0020310 RBH 0.0 0.000000 0.0
Zhenshan 97 | ZS97RS3 | HZAU OsZS97_01G0579000 SBH 7.469484 2.897213 13.8484005
LIMA | Os127564RS1 | Gramene(+IsoSeq) OsLima_05g0020550 RBH 0.0 0.0 None
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) OsKYG_05g0020530 RBH 0.0 0.0 None
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) OsGoSa_05g0020620 RBH 0.0 0.0 None
LIU XU | Os125827RS1 | Gramene(+IsoSeq) OsLiXu_05g0020690 RBH 0.0 0.0 0.0
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) OsLaMu_05g0020680 RBH 0.0 0.0 None
N22 | OsN22RS2 | Gramene(+IsoSeq) OsN22_05G020150 RBH 0.0 0.0 0.0
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) OsNaBo_05g0020590 RBH 0.0 0.0 0.0
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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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