Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsZS97_05G0296500 | OGI:05020690 | 16/16 | Zhenshan 97 | ZS97RS3 | HZAU | Chr05:19356604-19357928 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | GGTAAATCTTAAATTGAATTTGTAAAAATGGGATGGACGTTGTTTCAAAGGTCGTCCAGATTTGGACGCTGTTCTAAGAAGTGTCCAGAGGTGGACGCTGTACCGAAGCACGTCCAGGCTCGGTTTGGGGCGCCCATGCCGCCATGCGGAGAGGCGCCATCGTCGACTCTCCTCTTCTCGGGCCCAATGTTGGTGCAGGGCTCGGGCAAGGTGCTGCCATGCCCGCCGTTCACCTCGACTCTGGGAGACTGCAATAGCCGCCTTCCGGCTTCCGCCTCCACAACGTCAGGAATCTGCCGTTGCAGTTCACCTCAACTCACCTTGAAGGCTCTCGAATCCGGAGAGGACGCCGCCGCTTTCTGCCTTCACGCCGGGAGGTCGCAGCCGCTATCCACGTTCTGGTTGAGTCATGCTGGAACAAAAACCCACCCGTGCCGGCTTGTGTTGCGTCGTCTATCCGCCCCTCTTGGTTCCTAACAGCAAGTCCAGGCATCGCCTCACTCCAGGTGGCTGGCCGAGCAAGTATGCTCAATTCATAGATCTTGGTATTCAGTTGTATATGTTCTGCATTAGAAAGTTTACAAAGAATGCAAAATTACGAAGGGTAGGACGCAAACATCCTCCTTCTATCAGATCATCTGTCGCCCGATGACTTCCAATCTCTGGCCTGTTGCAAAAGGGAAAAAAAAGCATCGATCGAAGACATCGCATGCGGTTCATCTGGCGACCGCTTCTCAAGATTCAGTCAGCAGAGAGCTCGATGCGTAGTAAACAATGGACCAAAACAAAAACCAAACTAATCAAATATCTCAAAATAAAAGTGGTGGCTGTTCACATATGACCCCGAGTAGAGTGTCCATCATGCGGAATAGCAGAAGCATTGAAGGAGGGCCGGGGGATGGCGACCCTGTCTGGCAGATCAGGTAGAGAGCGGTGCCTGCTCGGCAAGCAAGCAATCAACGAGAGACAATAGTCTGCATAGGAGTAACGAGGCAGAGTTCGACCATTGTGTGATTGGATCCAAAGTCCAATCTTAGTCCGGTGAATTGGACGGCTCTTTGGGGTCTTCAACTGCAGCATTATGGACGCCCTTGTAAGAAGCGTCCCCATCTGGACATTGTCTACAACAGTGTCCACACCTGGACACCCTATGCAATAGCGTCCTTCCTATTTCGTAAAAATTGACTTTGCTTTATTATATATTTAATTTCTGCATTATTAATTATTATGAATAAAAAATTCAGAGCAATATTTAATCCCAGGAAAATTCATTTCCTTCTTTTTCTTTTTCTTTTTCCCCTTTTTCTTTTTCGAATGGGCCGCCG
More
|
||||||||||
| CDS seq | ATGGGATGGACGTTGTTTCAAAGGTCGTCCAGATTTGGACGCTGTTCTAAGAAGTGTCCAGAGGTGGACGCTGTACCGAAGCACGTCCAGGCTCGGTTTGGGGCGCCCATGCCGCCATGCGGAGAGGCGCCATCGTCGACTCTCCTCTTCTCGGGCCCAATGTTGGTGCAGGGCTCGGGCAAGGTGCTGCCATGCCCGCCGTTCACCTCGACTCTGGGAGACTGCAATAGCCGCCTTCCGGCTTCCGCCTCCACAACGTCAGGAATCTGCCGTTGCAGTTCACCTCAACTCACCTTGAAGGCTCTCGAATCCGGAGAGGACGCCGCCGCTTTCTGCCTTCACGCCGGGAGGTCGCAGCCGCTATCCACGTTCTGGTTGAGTCATGCTGGAACAAAAACCCACCCGTGCCGGCTTGTGTTGCGTCGTCTATCCGCCCCTCTTGGTTCCTAA
More
|
||||||||||
| Protein seq | MGWTLFQRSSRFGRCSKKCPEVDAVPKHVQARFGAPMPPCGEAPSSTLLFSGPMLVQGSGKVLPCPPFTSTLGDCNSRLPASASTTSGICRCSSPQLTLKALESGEDAAAFCLHAGRSQPLSTFWLSHAGTKTHPCRLVLRRLSAPLGS |
||||||||||
| Function | - | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsZS97_05G0296500 | OsZS97_05T0296500.1 | Chr05 | 19356604 | 19357928 | + | makerRMon | ||
| CDS seq | ATGGGATGGACGTTGTTTCAAAGGTCGTCCAGATTTGGACGCTGTTCTAAGAAGTGTCCAGAGGTGGACGCTGTACCGAAGCACGTCCAGGCTCGGTTTGGGGCGCCCATGCCGCCATGCGGAGAGGCGCCATCGTCGACTCTCCTCTTCTCGGGCCCAATGTTGGTGCAGGGCTCGGGCAAGGTGCTGCCATGCCCGCCGTTCACCTCGACTCTGGGAGACTGCAATAGCCGCCTTCCGGCTTCCGCCTCCACAACGTCAGGAATCTGCCGTTGCAGTTCACCTCAACTCACCTTGAAGGCTCTCGAATCCGGAGAGGACGCCGCCGCTTTCTGCCTTCACGCCGGGAGGTCGCAGCCGCTATCCACGTTCTGGTTGAGTCATGCTGGAACAAAAACCCACCCGTGCCGGCTTGTGTTGCGTCGTCTATCCGCCCCTCTTGGTTCCTAA
More
|
|||||||
| Protein seq | MGWTLFQRSSRFGRCSKKCPEVDAVPKHVQARFGAPMPPCGEAPSSTLLFSGPMLVQGSGKVLPCPPFTSTLGDCNSRLPASASTTSGICRCSSPQLTLKALESGEDAAAFCLHAGRSQPLSTFWLSHAGTKTHPCRLVLRRLSAPLGS |
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0 | 0 | 0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os05g32010 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | NA | NA | NA | NA | NA |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_05g0015450 | RBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_03g0009700 | RBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_03g0009750 | RBH | 0.0 | 0.0 | 0.000000 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_03g0009680 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_03g0009570 | RBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_05G0286000 | RBH | 0 | 0 | 0 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_03g0009480 | RBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | NA | NA | NA | NA | NA |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_03g0009580 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_07g0013100 | SBH | 0.116065 | 0.906732 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_03g0009580 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_03g0009650 | SBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_03g0009600 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_03G009580 | RBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_05g0015240 | RBH | 0.0 | 0.0 | 0.0 |
