Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsZS97_05G0286900 | OGI:05048720 | 3/16 | Zhenshan 97 | ZS97RS3 | HZAU | Chr05:18746034-18751063 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | TCACGCGTGTGGTACAGACGTGACAGTACCGCCTGCCCGAGAAACAGCTTGTCCCCAAACTGGTGCTGATGGAAAGCAGGTCTTGAGCACTTCATAATCCTCCCAGGTAGCCTGATGCGCCGGTAAAGAAGACCACTTAATCAACACCTGAACATGTGCTGCATTGCCCTTTTTCACAAGCCGACGATCGAGTATTTCTTCAGGTCAAACGTCAGCGGCATCCAAAACCACAGGGTGAGGAAGAGAAGTAAAGACCGGTGTATGATCAGGAACATGTGCTTTCAACTGAGAGACATGAAAGACGGGATGAATCAAACTTGAGTCTGGTAACTGTAACCGATAAGCCGACTGACCAATTTTCTCTAGAATTTCAAATGGGCCAAAGAACTTGAAAGCTAGTTTGGGGTATGGACGATTCACCACCGAAGATTGAGTATATGGCTGCAACTTCAGAAACACATAATCCCCAACTGCAAAGGATCGTTCAGACCGGCCTTTGTCTGCTTGATGCTTCATGCGCAACTGAGCCCGTTGCAGTTGTTGTTGTAAGAAAGCAGATAGCTGATTGCGTTCAGAAACAAGATCAACCACTGACTGATGGACTGAGGAGAGAAGTACTAGCACTTGACTGACATGAGGATCAGCTCCAAACAAAGCTTTATGAGGAGAACAACCCAATGCAGTGTGAAAAGAGGTATTGTACCAGTATTCTGCCAAGTGCAGCCATTTGTTCCACTTAGTTGATGTTGCTTGAGTAATACAACGCAAGTACATTTCAAGACATTGATTAACACGCTCGGTCTGGCCGTCCGTTTGAGGATGATAAGCGGAGCTCATACTCAGAGTAGTGTCCCACACTTTGAACAAATCACTCCAAAATCGGCTGGTGAAAATTTTATCCCGATCTGAGACGATAGAATGAGGGATGCCATGTGTCTTGAAAGCTGTTTTGTCAACTGCATTGGCCACTTGGGAAGCAGTAAATGGATGACGCAAGGGAATAAAATGGGCAAACTTAGTGAATCTATCCACTACCACAAGAATGACAGTGAATCCATCAGACTTGGGAAGACCTTTGATAAAATCCATTGATATGTCCACCCAGGCTTCCTTAGGAATTGGTAATGGTGTTAACAAGCCAGGGAGCTTGCAGTGTTCAGACTTGGCCTGCTGACAAATCTGACACTGCTTAACAAAGTTAGCCACATCTGATTTCAGACCTACCCAAGAAAATAACTTCTTCATCCTTTGATAGGTAGCAGTAGAGCCAGAATGACCCCCAACAGGAGAAGAATGAAAAGCATTAATCAATTTCGTTTGTAATCCAGTGTTAGCTCCAATCCATACTCGTTCATGATGTCTGATTAATCCATCATGCAGAGAAAAACCTTGTGTATTAGGAGATTGAACAGCCAATTCGGTCAGCAAAGTTTGAGCAGTAGGATCCACTAGATAAGAATTTAACACCTCCTGGAGCCAGAAGGGAGAAGCCACTGACAGTGCAGCACAATGAGGTATAACAAGCATCCTGGACAGCGCATCAGCTATTGTCAACTCCTTTTTGGTATTGAAAAGTATATTGAAAACCCATCAATTTAGTCATAGCCTTCTGTTGCAAATCAGTTCCAAGAACTTGATCATTCAAGTGACATAGACTTTTGTGATCAGTGCAAATAGTAAAAGGGCAGCGCTGTAAATAACATCTCCATTTGTCTACAGCCATCATTATAGCCAAAAACTCCTTTTCATAGATAGAAAGTTTCTGATTAGTTGGTCCCAAAGCTTTGCTATAATAAGCAATAGGGTGATTCAACTGGCTGAGCACAGCACCAACTCCATAAGCACAGGCATCTGTCTCCAAAACAAAGGGAAGACTGAAATTAGGTAATGCTAGCACCGGGGTAGAACTCATGGCTAGTTTGAGCTGTTGAAAAGCTTGTTGAGCAGCATCTGACCAGAGGAATGCTTTCTTTTTTAATAACACTGTGAGAGGTTTGGCTATAATGCTGTAATTCGGAACAAATTTGTGATAGTAACCTGTGAGGCCCAGAAAACCTCTCAACTCAGTTGCAGTTTGTGGAATAGGCCAGGCTAACATCGCTGCAGTTTTGGCAGCATCAGTACTAACACCTTTAACAGAAATTATGTGGCCCAAATACTCTAATTGAGCACAAGCAAAAGAGCGCTTAGACATTTTGGCATATAACTGATGCTGTCGCAACAACATAAACACTTGTCTCAGATGATGTAGGTGAGAATCCAAGTCAGGGCTGTACACTAAAATATCATCCATGAAAACCAATACACATTGCGAATAAGAGATGCAAATACTGAATTCATCAGGCATTGAAATGTAGATGGAGCATTTGTTAAACCAAAGGGCATAACCCTGAATTGAAACTGCCCATGATGAGTTTTGAAAGCGGTTTTAAACTCATCCTGTTCCACCATACGGATTTGATGATAACCGGCTCTCAAGTCCAGTTTAGAGAAGTATTGTTTGCCCGCTAACTCATCCAATAACTCATCAACCACCGGCATTGGAAACTTACTCTTAATAGTGACAGAGTTGAGTTTGCGATAATCCACACAAAAACACCATGTCCCATCTTTCTTTTTGACCAACAAGACTGGGGAGGCAAAAGGGCTCATGCTGGGAGTAATAAGACCAGAATCAATCATGTCCTTGACTTGGCATTCAATCTCATCCTTTTGTAAAGGAGAATACCTGTAAGGTTTACTGTTGACAGGAGCATCATCAGGGTACAAGAAGATAGCATGATCAAAAGTGCGATGAGGAGGTAAACACTTGGGCTCTTGAAAAACATCAGCAAACTCAGACAGTAATGGAGCTACTACTTCTGAAATGGACTAAGAATTTGCATTGTCAGTAGGTTCAAGCAAAACAGCAGCCCAAATATCACAACCCTTCTGCCATTTCAATATTTGAGGGTAAGAAATAGCACATAATTCAGTCTGGGAATCAAACTCTTGAACACCCTGCAGTGCAATCCACTGATCTTGATAGAAAAACTTCAGAGTTTTAGTTGCCCAGTTACAAGACATATCACCCCATTGAGCCAACCAATTCATCCCCAATATTGCATCATGGCCCCCCGACTGAACCACTTTCAGATCATAAGAGAATGTCTGACCTTGGATCCACCATGTGAAATTAGAAACCACATATTGGCAAGAGAGAAACTCACCATTAGCTACCTGAACCAAGGAAGGGGAAATAGGGCACAACTGCAAACCCAACAGCTGAGCGAAATTGAGATCAATGAAACTATGAGAGCTGCCGGAATCCACCAACATCAACAATACTTTATTCTGAACCAATGCTCTCAAACGAATAGCATTATGGCGAGATGCACCAGATAACGCATTCAAAGAAATATGATACTGCTCCTCAGCATCAGAATCTTCTTCGGCAGCCACTGCATTCCAAAGATCATCTGGAATAACTTCAATGATTTGCATAGCTTTTAATTAACCAGTGATCACACACTGATGATCAGGTGAATATTTATCCCCACATTTAAAACAGAGTCCATTCGCTCTTCTATATTCCTTCAACTGTTTAGCTTTCCATAATTCAGCTCTTTCAGGTTGAATGGCTGATGGCTCAGAGACAGGAACAGACGTATCCACTTTAGCGCCAACCCCTTTGTATGTCAATTTCTTAAGAGGTTTCTGTCCACTGTCTAGTAACACACTTTCTTGCACTAAAGCAATTGCAGCAGCCTGCTGAACAGTGTCAGGTAACTGGACCAGCACAGCTGAGCGGATTTCTTCCTTTAGACCCAGAATAAAACGATACAGCAGCATCATCCCTCCCACAGATGGATCAAACACACGCACCTGGTACACTAGTGAATCAAACTGGGACTTATAATCGGCAACTGAACCAGTTTGCCGTAAGGTTTGCAGCGCCTGAACTTTTTCACGCTGTGCAGTACTTTCAAACTCGAGAGCAACCGCATAACGAAATTGAGACCAGTCACAAATCTCTTCTACTAACTTAAAGGATTGGTACCACTGTGCTGCATTTCCAGACATATGCAAGACTGCCGCAGAAACCTTAAACATAGCCGGAATTTGGTACATGTCAAAATAGGTCTCGCACATATCTAGCCAAATACGGACATCAGAGCCATCGAAACGAGGAAAATCCATCTTAGGCAAGCAACTCTTAGCACGAACACCCTGATCAAAACCCTGGCTAGACTCCGCTTCGTTGCGAATAAACACAGGACGAGTATGGAACCTTGGCGGCGGCGGCGGCGGTAGTGGTGGTGGTGGGGAAACACCCGCATTGCCAAGAGAAACCGCAGATGGGGAGCCCAGAATACTCACTTGATCGGAAGACGCCAAACTCTTTTGCAGCCGCGCCGCCTGAAGCTGATCTTGCTGCAGCTTCCCGACCGCCTCCAGAGCGAGATCCACCTTGACGACGGCCTGATCGAGCCGCCCTCCGTGTTTCGTCATCTTGTCGTCCATAGCCTCCATCTTCTGAGTGAGTAACTCCAACTTCTCCAACAATTTCCCCTCCATCGACTCGAGCGATTGGCATAACGGAGCGCTGAGCTTGATGGGCGCCGTGGTGAGCGTTCACTCCAAATCCAACTGAACCTGAACCGGACTTACAGCAGCCGCACCCGAGGGTAGCCGCCTACCGGAGCATAGGGATTTTACCAGTCAGATCGAGAGAATTTGAACACATCAACCACGGAAAACCCGAATCTGATACCACTGTAACACTACTAGATCATAGCAGAGGAATAACTAGAGCAGGAGAGGTGAAGAACAGAGGAGGAGGAGACAGAGTCGAGGAAGAAAGGGGCAGAGCAGAGTTGTTGAGAGGAGAGATTCATTTTTCCTTTCTTCATTTCACACCTCTCTCATTACAGGGTTCCTTACTTATAAAGGTCATACATGCCAGCCTGGCCGCTTGGCCGAATCACACAACACACATGCGCACACACCCACCCGACACGTTACTGTAAACGTCATCCTGGCGTTGTAGC
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| CDS seq | ATGGAGGGGAAATTGTTGGAGAAGTTGGAGTTACTCACTCAGAAGATGGAGGCTATGGACGACAAGATGACGAAACACGGAGGGCGGCTCGATCAGGCCGTCGTCAAGGTGGATCTCGCTCTGGAGGCGGTCGGGAAGCTGCAGCAAGATCAGCTTCAGGCGGCGCGGCTGCAAAAGAGTTTGGCGTCTTCCGATCAAGTGAGTATTCTGGGCTCCCCATCTGCGGTTTCTCTTGGCAATGCGGGTGTTTCCCCACCACCACCACTACCGCCGCCGCCGCCGCCAAGGTTCCATACTCGTCCTGTGTTTATTCGCAACGAAGCGGAGTCTAGCCAGGGTTTTGATCAGGGTGTTCGTGCTAAGAGTTGCTTGCCTAAGATGGATTTTCCTCGTTTCGATGGCTCTGATGTCCGTATTTGGCTAGATATGTGCGAGACCTATTTTGACATGTACCAAATTCCGGCTATGTTTAAGGTTTCTGCGGCAGTCTTGCATATGTCTGGAAATGCAGCACAGTGGTACCAATCCTTTAAGTTAGTAGAAGAGATTTGTGACTGGTCTCAATTTCGTTATGCGGTTGCTCTCGAGTTTGAAAGTACTGCACAGCGTGAAAAAGTTCAGGCGCTGCAAACCTTACGGCAAACTGGTTCAGTTGCCGATTATAAGTCCCAGTTTGATTCACTAGTGTACCAGGTGCGTGTGTTTGATCCATCTGTGGGAGGGATGATGCTGCTGTATCGTTTTATTCTGGGTCTAAAGGAAGAAATCCGCTCAGCTGTGCTGGTCCAGTTACCTGACACTGTTCAGCAGGCTGCTGCAATTGCTTTAGTGCAAGAAAGTGTGTTACTAGACAGTGGACAGAAACCTCTTAAGAAATTGACATACAAAGGGGTTGGCGCTAAAGTGGATACGTCTGTTCCTGTCTCTGAGCCATCAGCCATTCAACCTGAAAGAGCTGAATTATGGAAAGCTAAACAGTTGAAGGAATATAGAAGAGCGAATGGACTCTGTTTTAAATGTGGGGATAAATATTCACCTGATCATCAGTGTGTGATCACTGTGGCTGCCGAAGAAGATTCTGATGCTGAGGAGCAGTATCATATTTCTTTGAATGCGTTATCTGGTGCATCTCGCCATAATGCTATTCGTTTGAGAGCATTGGTTCAGAATAAAGTATTGTTGATGTTGGTGGATTCCGGCAGCTCTCATAGTTTCATTGATCTCAATTTCGCTCAGCTGTTGGGTTTGCAGTTGTGCCCTATTTCCCCTTCCTTGGTTCAGGTAGCTAATGGTGAGTTTCTCTCTTGCCAATATGTGGTTTCTAATTTCACATGGTGGATCCAAGGTCAGACATTCTCTTATGATCTGAAAGTGGTTCAGTCGGGGGGCCATGATGCAATATTGGGGATGAATTGGTTGGCTCAATGGGGTGATATGTCTTGTAACTGGGCAACTAAAACTCTGAAGTTTTTCTATCAAGATCAGTGGATTGCACTGCAGGGTGTTCAAGAGTTTGATTCCCAGACTGAATTATGTGCTATTTCTTACCCTCAAATATTGAAATGGCAGAAGGAAGTAGTAGCTCCATTACTGTCTGAGTTTGCTGATGTTTTTCAAGAGCCCAAGTGTTTACCTCCTCATCGCACTTTTGATCATGCTATCTTCTTGTACCCTGATGATGCTCCTGTCAACAGTAAACCTTACAGGTATTCTCCTTTACAAAAGGATGAGATTGAATGCCAAGTCAAGGACATGATTGATTCTGGTCTTATTACTCCCAGCATGAGCCCTTTTGCCTCCCCAGTCTTGTTGGTCAAAAAGAAAGATGGGACATGGTGTTTTTGTGTGGATTATCGCAAACTCAACTCTGTCACTATTAAGAGTAAGTTTCCAATGCCGGTGGTTGATGAGTTATTGGATGAGTTAGCGGGCAAACAATACTTCTCTAAACTGGACTTGAGAGCCGGTTATCATCAAATCCGTATGGTGGAACAGGATGAGTTTAAAACCGCTTTCAAAACTCATCATGGGCAGTTTCAATTCAGGGTTATGCCCTTTGGTTTAACAAATGCTCCATCTACATTTCAATGCCTGATGAATTCAGTATTTGCATCTCTTATTCGCAATGTGTATTGGTTTTCATGGATGATATTTTAG
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| Protein seq | MEGKLLEKLELLTQKMEAMDDKMTKHGGRLDQAVVKVDLALEAVGKLQQDQLQAARLQKSLASSDQVSILGSPSAVSLGNAGVSPPPPLPPPPPPRFHTRPVFIRNEAESSQGFDQGVRAKSCLPKMDFPRFDGSDVRIWLDMCETYFDMYQIPAMFKVSAAVLHMSGNAAQWYQSFKLVEEICDWSQFRYAVALEFESTAQREKVQALQTLRQTGSVADYKSQFDSLVYQVRVFDPSVGGMMLLYRFILGLKEEIRSAVLVQLPDTVQQAAAIALVQESVLLDSGQKPLKKLTYKGVGAKVDTSVPVSEPSAIQPERAELWKAKQLKEYRRANGLCFKCGDKYSPDHQCVITVAAEEDSDAEEQYHISLNALSGASRHNAIRLRALVQNKVLLMLVDSGSSHSFIDLNFAQLLGLQLCPISPSLVQVANGEFLSCQYVVSNFTWWIQGQTFSYDLKVVQSGGHDAILGMNWLAQWGDMSCNWATKTLKFFYQDQWIALQGVQEFDSQTELCAISYPQILKWQKEVVAPLLSEFADVFQEPKCLPPHRTFDHAIFLYPDDAPVNSKPYRYSPLQKDEIECQVKDMIDSGLITPSMSPFASPVLLVKKKDGTWCFCVDYRKLNSVTIKSKFPMPVVDELLDELAGKQYFSKLDLRAGYHQIRMVEQDEFKTAFKTHHGQFQFRVMPFGLTNAPSTFQCLMNSVFASLIRNVYWFSWMIF |
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| Function | Transposon Ty3-I Gag-Pol polyprotein [UniProtKB/Swiss-Prot:Q7LHG5] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsZS97_05G0286900 | OsZS97_05T0286900-mRNA-1 | Chr05 | 18748272 | 18750590 | - | makerRMon | ||
| CDS seq | ATGGAGGGGAAATTGTTGGAGAAGTTGGAGTTACTCACTCAGAAGATGGAGGCTATGGACGACAAGATGACGAAACACGGAGGGCGGCTCGATCAGGCCGTCGTCAAGGTGGATCTCGCTCTGGAGGCGGTCGGGAAGCTGCAGCAAGATCAGCTTCAGGCGGCGCGGCTGCAAAAGAGTTTGGCGTCTTCCGATCAAGTGAGTATTCTGGGCTCCCCATCTGCGGTTTCTCTTGGCAATGCGGGTGTTTCCCCACCACCACCACTACCGCCGCCGCCGCCGCCAAGGTTCCATACTCGTCCTGTGTTTATTCGCAACGAAGCGGAGTCTAGCCAGGGTTTTGATCAGGGTGTTCGTGCTAAGAGTTGCTTGCCTAAGATGGATTTTCCTCGTTTCGATGGCTCTGATGTCCGTATTTGGCTAGATATGTGCGAGACCTATTTTGACATGTACCAAATTCCGGCTATGTTTAAGGTTTCTGCGGCAGTCTTGCATATGTCTGGAAATGCAGCACAGTGGTACCAATCCTTTAAGTTAGTAGAAGAGATTTGTGACTGGTCTCAATTTCGTTATGCGGTTGCTCTCGAGTTTGAAAGTACTGCACAGCGTGAAAAAGTTCAGGCGCTGCAAACCTTACGGCAAACTGGTTCAGTTGCCGATTATAAGTCCCAGTTTGATTCACTAGTGTACCAGGTGCGTGTGTTTGATCCATCTGTGGGAGGGATGATGCTGCTGTATCGTTTTATTCTGGGTCTAAAGGAAGAAATCCGCTCAGCTGTGCTGGTCCAGTTACCTGACACTGTTCAGCAGGCTGCTGCAATTGCTTTAGTGCAAGAAAGTGTGTTACTAGACAGTGGACAGAAACCTCTTAAGAAATTGACATACAAAGGGGTTGGCGCTAAAGTGGATACGTCTGTTCCTGTCTCTGAGCCATCAGCCATTCAACCTGAAAGAGCTGAATTATGGAAAGCTAAACAGTTGAAGGAATATAGAAGAGCGAATGGACTCTGTTTTAAATGTGGGGATAAATATTCACCTGATCATCAGTGTGTGATCACTGTGGCTGCCGAAGAAGATTCTGATGCTGAGGAGCAGTATCATATTTCTTTGAATGCGTTATCTGGTGCATCTCGCCATAATGCTATTCGTTTGAGAGCATTGGTTCAGAATAAAGTATTGTTGATGTTGGTGGATTCCGGCAGCTCTCATAGTTTCATTGATCTCAATTTCGCTCAGCTGTTGGGTTTGCAGTTGTGCCCTATTTCCCCTTCCTTGGTTCAGGGTGTTCAAGAGTTTGATTCCCAGACTGAATTATGTGCTATTTCTTACCCTCAAATATTGAAATGGCAGAAGGAAGTAGTAGCTCCATTACTGTCTGAGTTTGCTGATGTTTTTCAAGAGCCCAAGTGTTTACCTCCTCATCGCACTTTTGATCATGCTATCTTCTTGTACCCTGATGATGCTCCTGTCAACAGTAAACCTTACAGGTATTCTCCTTTACAAAAGGATGAGATTGAATGCCAAGTCAAGGACATGATTGATTCTGGTCTTATTACTCCCAGCATGAGCCCTTTTGCCTCCCCAGTCTTGTTGGTCAAAAAGAAAGATGGGACATGGGTTATGCCCTTTGGTTTAACAAATGCTCCATCTACATTTCAATGCCTGATGAATTCAGTATTTGCATCTCTTATTCGCAATTGTACAGCCCTGACTTGGATTCTCACCTACATCATCTGA
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| Protein seq | MEGKLLEKLELLTQKMEAMDDKMTKHGGRLDQAVVKVDLALEAVGKLQQDQLQAARLQKSLASSDQVSILGSPSAVSLGNAGVSPPPPLPPPPPPRFHTRPVFIRNEAESSQGFDQGVRAKSCLPKMDFPRFDGSDVRIWLDMCETYFDMYQIPAMFKVSAAVLHMSGNAAQWYQSFKLVEEICDWSQFRYAVALEFESTAQREKVQALQTLRQTGSVADYKSQFDSLVYQVRVFDPSVGGMMLLYRFILGLKEEIRSAVLVQLPDTVQQAAAIALVQESVLLDSGQKPLKKLTYKGVGAKVDTSVPVSEPSAIQPERAELWKAKQLKEYRRANGLCFKCGDKYSPDHQCVITVAAEEDSDAEEQYHISLNALSGASRHNAIRLRALVQNKVLLMLVDSGSSHSFIDLNFAQLLGLQLCPISPSLVQGVQEFDSQTELCAISYPQILKWQKEVVAPLLSEFADVFQEPKCLPPHRTFDHAIFLYPDDAPVNSKPYRYSPLQKDEIECQVKDMIDSGLITPSMSPFASPVLLVKKKDGTWVMPFGLTNAPSTFQCLMNSVFASLIRNCTALTWILTYII
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsZS97_05G0286900 | OsZS97_05T0286900-mRNA-2 | Chr05 | 18746034 | 18750590 | - | makerRMon | ||
| CDS seq | ATGCTTGTTATACCTCATTGTGCTGCACTGTCAGTGGCTTCTCCCTTCTGGCTCCAGGAGGTGTTAAATTCTTATCTAGTGGATCCTACTGCTCAAACTTTGCTGACCGAATTGGCTGTTCAATCTCCTAATACACAAGGTTTTTCTCTGCATGATGGATTAATCAGACATCATGAACGAGTATGGATTGGAGCTAACACTGGATTACAAACGAAATTGATTAATGCTTTTCATTCTTCTCCTGTTGGGGGTCATTCTGGCTCTACTGCTACCTATCAAAGGATGAAGAAGTTATTTTCTTGGGTAGGTCTGAAATCAGATGTGGCTAACTTTGTTAAGCAGTGTCAGATTTGTCAGCAGGCCAAGTCTGAACACTGCAAGCTCCCTGGCTTGTTAACACCATTACCAATTCCTAAGGAAGCCTGGGTGGACATATCAATGGATTTTATCAAAGGTCTTCCCAAGTCTGATGGATTCACTGTCATTCTTGTGGTAGTGGATAGATTCACTAAGTTTGCCCATTTTATTCCCTTGCGTCATCCATTTACTGCTTCCCAAGTGGCCAATGCAGTTGACAAAACAGCTTTCAAGACACATGGCATCCCTCATTCTATCGTCTCAGATCGGGATAAAATTTTCACCAGCCGATTTTGGAGTGATTTGTTCAAAGTGTGGGACACTACTCTGAGTATGAGCTCCGCTTATCATCCTCAAACGGACGGCCAGACCGAGCGTGTTAATCAATGTCTTGAAATGTACTTGCGTTGTATTACTCAAGCAACATCAACTAAGTGGAACAAATGGCTGCACTTGGCAGAATACTGGTACAATACCTCTTTTCACACTGCATTGGGTTGTTCTCCTCATAAAGCTTTGTTTGGAGCTGATCCTCATCTATCTGCTTTCTTACAACAACAACTGCAACGGGCTCAGTTGCGCATGAAGCATCAAGCAGACAAAGGCCGGTCTGAACGATCCTTTGCAGTTGGGGATTATGTGTTTCTGAAGTTGCAGCCATATACTCAATCTTCGGTGGTGAATCGTCCATACCCCAAACTAGCTTTCAAGTTCTTTGGCCCATTTGAAATTCTAGAGAAAATTGAAATACTCGATCGTCGGCTTGTGAAAAAGGGCAATGCAGCACATGTTCAGGTGTTGATTAAGTGGTCTTCTTTACCGGCGCATCAGGCTACCTGGGAGGATTATGAAGTGCTCAAGACCTGCTTTCCATCAGCACCAGTTTGGGGACAAGCTGTTTCTCGGGCAGGCGGTACTGTCACGTCTGTACCACACGCGTGA
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| Protein seq | MLVIPHCAALSVASPFWLQEVLNSYLVDPTAQTLLTELAVQSPNTQGFSLHDGLIRHHERVWIGANTGLQTKLINAFHSSPVGGHSGSTATYQRMKKLFSWVGLKSDVANFVKQCQICQQAKSEHCKLPGLLTPLPIPKEAWVDISMDFIKGLPKSDGFTVILVVVDRFTKFAHFIPLRHPFTASQVANAVDKTAFKTHGIPHSIVSDRDKIFTSRFWSDLFKVWDTTLSMSSAYHPQTDGQTERVNQCLEMYLRCITQATSTKWNKWLHLAEYWYNTSFHTALGCSPHKALFGADPHLSAFLQQQLQRAQLRMKHQADKGRSERSFAVGDYVFLKLQPYTQSSVVNRPYPKLAFKFFGPFEILEKIEILDRRLVKKGNAAHVQVLIKWSSLPAHQATWEDYEVLKTCFPSAPVWGQAVSRAGGTVTSVPHA
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsZS97_05G0286900 | OsZS97_05T0286900-mRNA-3 | Chr05 | 18748311 | 18751063 | - | makerRMon | ||
| CDS seq | ATGGAGGGGAAATTGTTGGAGAAGTTGGAGTTACTCACTCAGAAGATGGAGGCTATGGACGACAAGATGACGAAACACGGAGGGCGGCTCGATCAGGCCGTCGTCAAGGTGGATCTCGCTCTGGAGGCGGTCGGGAAGCTGCAGCAAGATCAGCTTCAGGCGGCGCGGCTGCAAAAGAGTTTGGCGTCTTCCGATCAACGTGAAAAAGTTCAGGCGCTGCAAACCTTACGGCAAACTGGTTCAGTTGCCGATTATAAGTCCCAGTTTGATTCACTAGTGTACCAGGTGCGTGTGTTTGATCCATCTGTGGGAGGGATGATGCTGCTGTATCGTTTTATTCTGGGTCTAAAGGAAGAAATCCGCTCAGCTGTGCTGGTCCAGTTACCTGACACTGTTCAGCAGGCTGCTGCAATTGCTTTAGTGCAAGAAAGTGTGTTACTAGACAGTGGACAGAAACCTCTTAAGAAATTGACATACAAAGGGGTTGGCGCTAAAGTGGATACGTCTGTTCCTGTCTCTGAGCCATCAGCCATTCAACCTGAAAGAGCTGAATTATGGAAAGCTAAACAGTTGAAGGAATATAGAAGAGCGAATGGACTCTGTTTTAAATGTGGGGATAAATATTCACCTGATCATCAGTGTGTGATCACTGTGGCTGCCGAAGAAGATTCTGATGCTGAGGAGCAGTATCATATTTCTTTGAATGCGTTATCTGGTGCATCTCGCCATAATGCTATTCGTTTGAGAGCATTGGTTCAGAATAAAGTAGCTAATGGTGAGTTTCTCTCTTGCCAATATGTGGTTTCTAATTTCACATGGTGGATCCAAGGTCAGACATTCTCTTATGATCTGAAAGTGGTTCAGTCGGGGGGCCATGATGCAATATTGGGGATGAATTGGTTGGCTCAATGGGGTGATATGTCTTGTAACTGGGCAACTAAAACTCTGAAGTTTTTCTATCAAGATCAGTGGATTGCACTGCAGGGTGTTCAAGAGTTTGATTCCCAGACTGAATTATGTGCTATTTCTTACCCTCAAATATTGAAATGGCAGAAGGAAGTAGTAGCTCCATTACTGTCTGAGTTTGCTGATGTTTTTCAAGAGCCCAAGTGTTTACCTCCTCATCGCACTTTTGATCATGCTATCTTCTTGTACCCTGATGATGCTCCTGTCAACAGTAAACCTTACAGGTATTCTCCTTTACAAAAGGATGAGATTGAATGCCAAGTCAAGGACATGATTGATTCTGGTCTTATTACTCCCAGCATGAGCCCTTTTGCCTCCCCAGTCTTGTTGGTCAAAAAGAAAGATGGGACATGGTGTTTTTGTGTGGATTATCGCAAACTCAACTCTGTCACTATTAAGAGTAAGTTTCCAATGCCGGTGGTTGATGAGTTATTGGATGAGTTAGCGGGCAAACAATACTTCTCTAAACTGGACTTGAGAGCCGGTTATCATCAAATCCGTATGGTGGAACAGGATGAGTTTAAAACCGCTTTCAAAACTCATCATGGGCAGTTTCAATTCAGGGTTATGCCCTTTGGTTTAACAAATGCTCCATCTACATTTCAATGCCTGATGAATTCAGTATTTGCATCTCTTATTCGCAATGTGTATTGGTTTTCATGGATGATATTTTAG
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| Protein seq | MEGKLLEKLELLTQKMEAMDDKMTKHGGRLDQAVVKVDLALEAVGKLQQDQLQAARLQKSLASSDQREKVQALQTLRQTGSVADYKSQFDSLVYQVRVFDPSVGGMMLLYRFILGLKEEIRSAVLVQLPDTVQQAAAIALVQESVLLDSGQKPLKKLTYKGVGAKVDTSVPVSEPSAIQPERAELWKAKQLKEYRRANGLCFKCGDKYSPDHQCVITVAAEEDSDAEEQYHISLNALSGASRHNAIRLRALVQNKVANGEFLSCQYVVSNFTWWIQGQTFSYDLKVVQSGGHDAILGMNWLAQWGDMSCNWATKTLKFFYQDQWIALQGVQEFDSQTELCAISYPQILKWQKEVVAPLLSEFADVFQEPKCLPPHRTFDHAIFLYPDDAPVNSKPYRYSPLQKDEIECQVKDMIDSGLITPSMSPFASPVLLVKKKDGTWCFCVDYRKLNSVTIKSKFPMPVVDELLDELAGKQYFSKLDLRAGYHQIRMVEQDEFKTAFKTHHGQFQFRVMPFGLTNAPSTFQCLMNSVFASLIRNVYWFSWMIF
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsZS97_05G0286900 | OsZS97_05T0286900-mRNA-4 | Chr05 | 18748311 | 18750590 | - | makerRMon | ||
| CDS seq | ATGGAGGGGAAATTGTTGGAGAAGTTGGAGTTACTCACTCAGAAGATGGAGGCTATGGACGACAAGATGACGAAACACGGAGGGCGGCTCGATCAGGCCGTCGTCAAGGTGGATCTCGCTCTGGAGGCGGTCGGGAAGCTGCAGCAAGATCAGCTTCAGGCGGCGCGGCTGCAAAAGAGTTTGGCGTCTTCCGATCAAGTGAGTATTCTGGGCTCCCCATCTGCGGTTTCTCTTGGCAATGCGGGTGTTTCCCCACCACCACCACTACCGCCGCCGCCGCCGCCAAGGTTCCATACTCGTCCTGTGTTTATTCGCAACGAAGCGGAGTCTAGCCAGGGTTTTGATCAGGGTGTTCGTGCTAAGAGTTGCTTGCCTAAGATGGATTTTCCTCGTTTCGATGGCTCTGATGTCCGTATTTGGCTAGATATGTGCGAGACCTATTTTGACATGTACCAAATTCCGGCTATGTTTAAGGTTTCTGCGGCAGTCTTGCATATGTCTGGAAATGCAGCACAGTGGTACCAATCCTTTAAGTTAGTAGAAGAGATTTGTGACTGGTCTCAATTTCGTTATGCGGTTGCTCTCGAGTTTGAAAGTACTGCACAGCGTGAAAAAGTTCAGGCGCTGCAAACCTTACGGCAAACTGGTTCAGTTGCCGATTATAAGTCCCAGTTTGATTCACTAGTGTACCAGGTGCGTGTGTTTGATCCATCTGTGGGAGGGATGATGCTGCTGTATCGTTTTATTCTGGGTCTAAAGGAAGAAATCCGCTCAGCTGTGCTGGTCCAGTTACCTGACACTGTTCAGCAGGCTGCTGCAATTGCTTTAGTGCAAGAAAGTGTGTTACTAGACAGTGGACAGAAACCTCTTAAGAAATTGACATACAAAGGGGTTGGCGCTAAAGTGGATACGTCTGTTCCTGTCTCTGAGCCATCAGCCATTCAACCTGAAAGAGCTGAATTATGGAAAGCTAAACAGTTGAAGGAATATAGAAGAGCGAATGGACTCTGTTTTAAATGTGGGGATAAATATTCACCTGATCATCAGTGTGTGATCACTGTGGCTGCCGAAGAAGATTCTGATGCTGAGGAGCAGTATCATATTTCTTTGAATGCGTTATCTGGTGCATCTCGCCATAATGCTATTCGTTTGAGAGCATTGGTTCAGAATAAAGTATTGTTGATGTTGGTGGATTCCGGCAGCTCTCATAGTTTCATTGATCTCAATTTCGCTCAGCTGTTGGGTTTGCAGTTGTGCCCTATTTCCCCTTCCTTGGTTCAGGTAGCTAATGGTGAGTTTCTCTCTTGCCAATATGTGGTTTCTAATTTCACATGGTGGATCCAAGGTCAGACATTCTCTTATGATCTGAAAGTGGTTCAGTCGGGGGGCCATGATGCAATATTGGGGATGAATTGGTTGGCTCAATGGGGTGATATGTCTTGTAACTGGGCAACTAAAACTCTGAAGTTTTTCTATCAAGATCAGTGGATTGCACTGCAGGGTGTTCAAGAGTTTGATTCCCAGACTGAATTATGTGCTATTTCTTACCCTCAAATATTGAAATGGCAGAAGGAAGTAGTAGCTCCATTACTGTCTGAGTTTGCTGATGTTTTTCAAGAGCCCAAGTGTTTACCTCCTCATCGCACTTTTGATCATGCTATCTTCTTGTACCCTGATGATGCTCCTGTCAACAGTAAACCTTACAGGTATTCTCCTTTACAAAAGGATGAGATTGAATGCCAAGTCAAGGACATGATTGATTCTGGTCTTATTACTCCCAGCATGAGCCCTTTTGCCTCCCCAGTCTTGTTGGTCAAAAAGAAAGATGGGACATGGTGTTTTTGTGTGGATTATCGCAAACTCAACTCTGTCACTATTAAGAGTAAGTTTCCAATGCCGGTGGTTGATGAGTTATTGGATGAGTTAGCGGGCAAACAATACTTCTCTAAACTGGACTTGAGAGCCGGTTATCATCAAATCCGTATGGTGGAACAGGATGAGTTTAAAACCGCTTTCAAAACTCATCATGGGCAGTTTCAATTCAGGGTTATGCCCTTTGGTTTAACAAATGCTCCATCTACATTTCAATGCCTGATGAATTCAGTATTTGCATCTCTTATTCGCAATGTGTATTGGTTTTCATGGATGATATTTTAG
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| Protein seq | MEGKLLEKLELLTQKMEAMDDKMTKHGGRLDQAVVKVDLALEAVGKLQQDQLQAARLQKSLASSDQVSILGSPSAVSLGNAGVSPPPPLPPPPPPRFHTRPVFIRNEAESSQGFDQGVRAKSCLPKMDFPRFDGSDVRIWLDMCETYFDMYQIPAMFKVSAAVLHMSGNAAQWYQSFKLVEEICDWSQFRYAVALEFESTAQREKVQALQTLRQTGSVADYKSQFDSLVYQVRVFDPSVGGMMLLYRFILGLKEEIRSAVLVQLPDTVQQAAAIALVQESVLLDSGQKPLKKLTYKGVGAKVDTSVPVSEPSAIQPERAELWKAKQLKEYRRANGLCFKCGDKYSPDHQCVITVAAEEDSDAEEQYHISLNALSGASRHNAIRLRALVQNKVLLMLVDSGSSHSFIDLNFAQLLGLQLCPISPSLVQVANGEFLSCQYVVSNFTWWIQGQTFSYDLKVVQSGGHDAILGMNWLAQWGDMSCNWATKTLKFFYQDQWIALQGVQEFDSQTELCAISYPQILKWQKEVVAPLLSEFADVFQEPKCLPPHRTFDHAIFLYPDDAPVNSKPYRYSPLQKDEIECQVKDMIDSGLITPSMSPFASPVLLVKKKDGTWCFCVDYRKLNSVTIKSKFPMPVVDELLDELAGKQYFSKLDLRAGYHQIRMVEQDEFKTAFKTHHGQFQFRVMPFGLTNAPSTFQCLMNSVFASLIRNVYWFSWMIF
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsZS97_05G0286900 | OsZS97_05T0286900-mRNA-5 | Chr05 | 18746034 | 18747560 | - | makerRMon | ||
| CDS seq | ATGCTTGTTATACCTCATTGTGCTGCACTGTCAGTGGCTTCTCCCTTCTGGCTCCAGGAGGTGTTAAATTCTTATCTAGTGGATCCTACTGCTCAAACTTTGCTGACCGAATTGGCTGTTCAATCTCCTAATACACAAGGTTTTTCTCTGCATGATGGATTAATCAGACATCATGAACGAGTATGGATTGGAGCTAACACTGGATTACAAACGAAATTGATTAATGCTTTTCATTCTTCTCCTGTTGGGGGTCATTCTGGCTCTACTGCTACCTATCAAAGGATGAAGAAGTTATTTTCTTGGGTAGGTCTGAAATCAGATGTGGCTAACTTTGTTAAGCAGTGTCAGATTTGTCAGCAGGCCAAGTCTGAACACTGCAAGCTCCCTGGCTTGTTAACACCATTACCAATTCCTAAGGAAGCCTGGGTGGACATATCAATGGATTTTATCAAAGGTCTTCCCAAGTCTGATGGATTCACTGTCATTCTTGTGGTAGTGGATAGATTCACTAAGTTTGCCCATTTTATTCCCTTGCGTCATCCATTTACTGCTTCCCAAGTGGCCAATGCAGTTGACAAAACAGCTTTCAAGACACATGGCATCCCTCATTCTATCGTCTCAGATCGGGATAAAATTTTCACCAGCCGATTTTGGAGTGATTTGTTCAAAGTGTGGGACACTACTCTGAGTATGAGCTCCGCTTATCATCCTCAAACGGACGGCCAGACCGAGCGTGTTAATCAATGTCTTGAAATGTACTTGCGTTGTATTACTCAAGCAACATCAACTAAGTGGAACAAATGGCTGCACTTGGCAGAATACTGGTACAATACCTCTTTTCACACTGCATTGGGTTGTTCTCCTCATAAAGCTTTGTTTGGAGCTGATCCTCATGTCAGTCAAGTGCTAGTACTTCTCTCCTCAGTCCATCAGTCAGTGGTTGATCTTGTTTCTGAACGCAATCAGCTATCTGCTTTCTTACAACAACAACTGCAACGGGCTCAGTTGCGCATGAAGCATCAAGCAGACAAAGGCCGGTCTGAACGATCCTTTGCAGTTGGGGATTATGTGTTTCTGAAGTTGCAGCCATATACTCAATCTTCGGTGGTGAATCGTCCATACCCCAAACTAGCTTTCAAGTTCTTTGGCCCATTTGAAATTCTAGAGAAAATTGGTCAGTCGGCTTATCGGTTACAGTTACCAGACTCAAGTTTGATTCATCCCGTCTTTCATGTCTCTCAGTTGAAAGCACATGTTCCTGATCATACACCGGTCTTTACTTCTCTTCCTCACCCTGTGGTTTTGGATGCCGCTGACGGCAATGCAGCACATGTTCAGGTGTTGATTAAGTGGTCTTCTTTACCGGCGCATCAGGCTACCTGGGAGGATTATGAAGTGCTCAAGACCTGCTTTCCATCAGCACCAGTTTGGGGACAAGCTGTTTCTCGGGCAGGCGGTACTGTCACGTCTGTACCACACGCGTGA
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| Protein seq | MLVIPHCAALSVASPFWLQEVLNSYLVDPTAQTLLTELAVQSPNTQGFSLHDGLIRHHERVWIGANTGLQTKLINAFHSSPVGGHSGSTATYQRMKKLFSWVGLKSDVANFVKQCQICQQAKSEHCKLPGLLTPLPIPKEAWVDISMDFIKGLPKSDGFTVILVVVDRFTKFAHFIPLRHPFTASQVANAVDKTAFKTHGIPHSIVSDRDKIFTSRFWSDLFKVWDTTLSMSSAYHPQTDGQTERVNQCLEMYLRCITQATSTKWNKWLHLAEYWYNTSFHTALGCSPHKALFGADPHVSQVLVLLSSVHQSVVDLVSERNQLSAFLQQQLQRAQLRMKHQADKGRSERSFAVGDYVFLKLQPYTQSSVVNRPYPKLAFKFFGPFEILEKIGQSAYRLQLPDSSLIHPVFHVSQLKAHVPDHTPVFTSLPHPVVLDAADGNAAHVQVLIKWSSLPAHQATWEDYEVLKTCFPSAPVWGQAVSRAGGTVTSVPHA
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0074555 | 0.072759 | 0.0078485 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os05g31070 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | NA | NA | NA | NA | NA |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_05G0276200 | RBH | 0 | 0.031801 | 0.023425 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Zhenshan 97 | ZS97RS3 | HZAU | NA | NA | NA | NA | NA |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
