Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsZS97_05G0021900 | OGI:05003780 | 7/16 | Zhenshan 97 | ZS97RS3 | HZAU | Chr05:1324666-1326602 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | ATGGAGACAGTCGATTCATCTGTGACTACAGACAAAGATGAACCTACTACTACTACTACTGCTGCTGATGAGTTTGACCCATGGAACCCTCCACTTCCGCCGCCTCCTGACAACCCTGATTCAGCAATGTGCTATACTCCATCAGTTCTCCTAGAGTCCTTGTTTTTTACTGGGTTTCCAACATGCATGCATTTCGTTTTTCAGTATGCAGATGTAACAGAGGACATACTTACAGAGTCCAGGCTTACAAACATAATCACCCCAGAGCGCACTCCTAAGGTTCTTGGCTCACTTCATCTCTCTCATCATTTTCATTTAGTAGGAGGATTGGGCCTCCTTTTGGTTATCCTGCAATGTCATGGTTGACGCGTAGACACAAGAATTTTATGACATTCGTACAAAGTTAATCAAGATCCATTTGTTGCTATAAAACTTTGAAGGCTAATGTTGTAAAAACTAAAGCATAAGTAGTTTGGCATGTGCCTCCTACTGGTTTTTTTGCGCAAATATCTCGGGTATGCATCCGTATAACCATGTCCATGCTAGCTCTGCCCCTGATTTTTTTTAGTTATATTGCAACATTGCAAGTTCATAATCCTAATGTGTATTTCAGCAAGATATTATTTCTTCTTGCCTCTCATTTGGTTGATTGACTGTGTTACCCTTTTTTGTAACATGAATGGGTCAATCTAGTTGGTGATTTTTTACTTCTGCGATATACAAGGTCACTTTTCAACCATCCTGAAAGACGATTGTGTCCAAAGCTTCCTCGATCTATTCGAGGATAATGTGCACCGCATGACATGGGGCTTGATCTTCACCGCGCACACTATCAACTTCATTATTGCAAACAATGCCATGCACTGTGCCAAGGTTGCCCTGGAGGGCACGGCACCAGACCTCTATGGGAACCGATTAGCTTTGGGTTCTTCGGTTCTTCCCCATTCACCAAGCAGCTTCAATGTTTTCTATCAACATGATCAACTTGCTTCTAGACTATGGTGCATCAGCCAATGTATGCACCGTAGGCAAAAAGGTCATCGAAGGTCTTCTTCCACTTCATGTTGCGATTGATGATACTTGCACGCATAAGTATCTTGAGGATAATTTGTTAACTTATCAGAAGGATCTGGATCACAAGAAGTTACATGTTGACTATATCTACAAGATCATCCATCTGTTGTGCCTCCCTGAGATGATTTGTCTAAAATCTTCCTCTTCACTAATTACTCCTTTTACAGCATAACACAAATAATTAAGTTGATGTTGATCTCATTTTCTATCCCGAACAAGTGTTGTAACATTATTTGCAGATTGAACATGTGTTTATCTCCACCTGTGAGTTTCCAAATGTTCCATCTTTGGTATTTCTGTTCATGTGTCAAGAGGCATGTAAAGGTTTGCTTTGATAGTATTCCCTCTATCCAAAATGCGAGATATTTTTAACTTTTCACTATCTCAGACACAATACGTTAGATATAGCTGTCTCATCATGTACTAGCAAAATGCAAAACAATAAAAGCAAAATATTATGTCAGCACTTTTCCCGGTGAATCCAATAACATAATTCCATGTTAATATTTGAAACACAACATATTTAAGGTAGATTGAAAACCCTAGTAGCATGAATCTGACGATGACCAACATTTTTGGACAGAGGGAGTAGACTGTTAATATTTTATCATTTTTTTATGAACACAAGTATTGGTGGGATTGTTTGTAAACAGATTTATTCTGTTGGTTGTATTGTTCTGCATTTCTGAATATCTCGTTTTGGAAAACTAAGATTTGGATCCGCCTTATGTGTTTTGAGAAAAAAAACTTTACTAAGTTCTAAACAGATTCTGACAAATCCATGTTGATGTTGTTTGTAGAAGATGTGCTTGGACACAATTAGTGTCATGGGCATTGGGCCGGAAGGCAGAGGCCATAGGTAG
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| CDS seq | ATGGAGACAGTCGATTCATCTGTGACTACAGACAAAGATGAACCTACTACTACTACTACTGCTGCTGATGAGTTTGACCCATGGAACCCTCCACTTCCGCCGCCTCCTGACAACCCTGATTCAGCAATGTGCTATACTCCATCAGTTCTCCTAGAGTCCTTGTTTTTTACTGGGTTTCCAACATGCATGCATTTCGTTTTTCAGTATGCAGATGTAACAGAGGACATACTTACAGAGTCCAGGCTTACAAACATAATCACCCCAGAGCGCACTCCTAAGGATAATGTGCACCGCATGACATGGGGCTTGATCTTCACCGCGCACACTATCAACTTCATTATTGCAAACAATGCCATGCACTGTGCCAAGGTTGCCCTGGAGGGCACGGCACCAGACCTCTATGGGAACCGATTAGCTTTGGACTATGGTGCATCAGCCAATGTATGCACCGTAGGCAAAAAGGTCATCGAAGGTCTTCTTCCACTTCATGTTGCGATTGATGATACTTGCACGCATAAGTATCTTGAGGATAATTTGTTAACTTATCAGAAGGATCTGGATCACAAGAAGTTACATAAGATGTGCTTGGACACAATTAGTGTCATGGGCATTGGGCCGGAAGGCAGAGGCCATAGGTAG
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| Protein seq | METVDSSVTTDKDEPTTTTTAADEFDPWNPPLPPPPDNPDSAMCYTPSVLLESLFFTGFPTCMHFVFQYADVTEDILTESRLTNIITPERTPKDNVHRMTWGLIFTAHTINFIIANNAMHCAKVALEGTAPDLYGNRLALDYGASANVCTVGKKVIEGLLPLHVAIDDTCTHKYLEDNLLTYQKDLDHKKLHKMCLDTISVMGIGPEGRGHR |
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| Function | - | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsZS97_05G0021900 | OsZS97_05T0021900.1 | Chr05 | 1324666 | 1326602 | + | makerRMon | ||
| CDS seq | ATGGAGACAGTCGATTCATCTGTGACTACAGACAAAGATGAACCTACTACTACTACTACTGCTGCTGATGAGTTTGACCCATGGAACCCTCCACTTCCGCCGCCTCCTGACAACCCTGATTCAGCAATGTGCTATACTCCATCAGTTCTCCTAGAGTCCTTGTTTTTTACTGGGTTTCCAACATGCATGCATTTCGTTTTTCAGTATGCAGATGTAACAGAGGACATACTTACAGAGTCCAGGCTTACAAACATAATCACCCCAGAGCGCACTCCTAAGGATAATGTGCACCGCATGACATGGGGCTTGATCTTCACCGCGCACACTATCAACTTCATTATTGCAAACAATGCCATGCACTGTGCCAAGGTTGCCCTGGAGGGCACGGCACCAGACCTCTATGGGAACCGATTAGCTTTGGACTATGGTGCATCAGCCAATGTATGCACCGTAGGCAAAAAGGTCATCGAAGGTCTTCTTCCACTTCATGTTGCGATTGATGATACTTGCACGCATAAGTATCTTGAGGATAATTTGTTAACTTATCAGAAGGATCTGGATCACAAGAAGTTACATAAGATGTGCTTGGACACAATTAGTGTCATGGGCATTGGGCCGGAAGGCAGAGGCCATAGGTAG
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| Protein seq | METVDSSVTTDKDEPTTTTTAADEFDPWNPPLPPPPDNPDSAMCYTPSVLLESLFFTGFPTCMHFVFQYADVTEDILTESRLTNIITPERTPKDNVHRMTWGLIFTAHTINFIIANNAMHCAKVALEGTAPDLYGNRLALDYGASANVCTVGKKVIEGLLPLHVAIDDTCTHKYLEDNLLTYQKDLDHKKLHKMCLDTISVMGIGPEGRGHR
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0 | 0 | 0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_05g0124600 | SBH | 0.0 | 0.0 | 2.652671 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os05g03240 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os05g0124600 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_05g0001830 | SBH | 0.0 | 0.0 | 1.069074 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_05g0001850 | SBH | 0.0 | 0.0 | 0.878714 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_05g0001920 | SBH | 0.000000 | 0.000000 | 2.235575 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_05g0001780 | SBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_05g0001770 | RBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_05G0020800 | RBH | 0 | 0 | 0 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_05g0001830 | SBH | 0.209407 | 0.0 | 1.929145 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_05G0023100 | SBH | 0.00694 | 0 | 9.0124685 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_05g0001790 | SBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_05g0001720 | SBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_05g0001760 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_05g0001770 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_05g0001800 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_05G001720 | SBH | 0.0 | 0.0 | 1.319183 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_05g0001870 | SBH | 0.0 | 0.0 | 3.509330 |
