Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsZS97_04G0402500 | OGI:04077440 | 16/16 | Zhenshan 97 | ZS97RS3 | HZAU | Chr04:27131327-27136538 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | CTCAGAACAACGTAAATATATTTCATAGGAAATGTACTAGAAAACAGCCTCCACACCACCATGTCACCATCTGACCGAGTTTCATTGATAACATTTACTCATGACTCCAGCTTCAAAGGCTTATGAGTCATCCAATCAGCATCTACTATATGTTTAACAACATCATTCAAGAATCTTGTACCACAAGTTGCAACGTAGGATCACACTGTAAACTATTATGTATTGACTTTACAAGCAGTATCCAGGTTTAGCACAAGAAGATTTGACCATCAAGCTGACTTCATAATAGCTAGTCTATGCAAATAATCTCAACCTCCTCTGGCTGGCCTATTTGGACCCAAACCGGTTTGCAGGATACAAGCTCAACAGCTTCATCCTGTCCTATGTGGAATATTACACCATTGCCGATTTCCTCTGAAACATATTAAACATACAAGTCGATCAGAGCAATATTCTTTAGATGGATCGAATTTGAACATGATTGGGTGCCATCAGCACACAAGTTTCGAAAATGGTGGAAGGCAATAAAGAACAAGAAAGAAAAATGTAAGCTACCTTCAGAAGAGTGGACATTCGTCTGGCCGAAGGTAAGATCAGTACAAGCAACAACATTACATTCAAGGATTTGCCCGGCACACCTTAAAAATGTCCAAGTTTTCTGAAATGCACAGAAAACCACAAAGCATGCAATGCTTTAGAGTATGCAACATTTGATAGCAATCATGTTTGATTTCTACTTGAGAAAGAACAAATACCTGACTATCTTGAACAGAGGGATTCTGGAATGGCAACACTTCACAACCTGATACCTTTTGTACTAGTTCTTTTCTCAATCTCAAACTGTGAAATGGGGAAATATGCTGGAGTTTTCTCAGCGATACGAGTTTTTTGTGACACCGAAGTTCTAGCATCTCAAGCTGAGAGAATAGAGGGAGTTGCAACAAATGGTTGACACGGCAGAAACCCTCCATTTTAATGCACTGGAGGGATGGGAAACTTGGCAAGTCGAGTAGACACTCACAATTTTTTATTCGCAGATCTACCAATGCCAGAAGCTTGGGCAACCCCGTTAGTTTGCTACAATTCAAAATGGTAAGGTGTCGGAGACAAGGGAAGTCTGTAGCCTCAGTTTCATCCCAATGCTCCCAAGATTCCATGTCTGTGAATTTCAGTGTCTCCAATGTAGGAAAAGCAATCCTGGACTGAAAATCACCAGAGCTAGTATGATCACCGCTAGATAACATCCGTCTCACGTGCTTGATGCTGGTGAGTGAGTTGATGAAAAGATGTTTCAGACAGGGTAATAGACCAAGAGATGGCAATTCTTTACAATTCCGACAATCTTTCAGCTCTAGGAAGGACAATTTAAACGAGCACTGGCTCCCCATCCATACAGGAAATTTGACACCAAAAAAGCCCATGATAATGAGTTCCTCCAGAGCAGGGTGGGGTTGAAGGCTGTCCAACACAGATGATGCGTCATTAGCAAACATGGAGTCATTGTGTGACCACTGGAGTACCAACTTACGCAATTCACCTTTGTTCTTCATGATAGCTTCTGTAGCAATTTGTTCTTTGCTTACGTTCTCTATGCCTGATATGCACAGCTCACCTCTAAGATTGTCCAAGTTAACCAAGTCAGCAATCCCACAACTTCCTGAATCACTTGTGAACTTGATCGTGTGCATTGTTTGGAGATTAGTTAATTCAGAAATTCCACATGGCATGTACACATTCCAGTTATCTATGCGTGGTAGTTCAAGATGCCTTAAGTTAGCAAGGAATTTTATCCCTTGTGGCAGCTCACTAAGATAGTTGCAACACTTGAGGTTCATCGTGTGCAACTTGAATAGAGAACTTATTGACTCTGGCAGGCACTTGATTTTGGTGTTCTCAAGACTGAGGTACCTAAGGTGTATCAGTTCCCCAATAGAGTTTGGCAGGCCCTCCATGTCAGTATTACTCAAATCCAGAGCCCTTAAACATACAAAAGCTTTGAACAGAACACTTGGTTTTTGTATGCTCGAAGTTTTTCTTCCATCGTCATGTTTGGTTCTCTGGACAACCAGCAAAGTTCGCAGGCCAGGGTATTGGGATTCATTCATATATTTGTTATTGGATGCATGAAATTCTCCTATTTCATGAGAATGAGTCTCGCTTGGAGTCAAGGATAGATGGCGAGCTTCTCCATTTACGTTGCTCAATGTAAATCTCTCTATTCTAGAGTACTCATCGGCTGCTACGTACTCAGCAAGCTCATGGTAGAGATCATGCATGACATACCTGTTAGTATAATCAGTGTTATGGAAGTTTCTGAAGGATCTTAAAACAGCATAAACCCATGAAGCAAGAATATGATTAAAATGAGTTATACCTAACTAACATGAAGCCTGAAAAGGTTTAACCAGAAATGAATGTTTATATGACCAACATTAGTAGTTGTTTAAGGCCATCCATCTAGTTATAACCATAGGAGCTTTTCATCTAATAATCAATAGCCATCAATACAAATATTCATCAAACCACTGGGATTAAGACATGGAAAATATGGAAGGCTATCAAAGTGTGAGCTCTTGCAGTGCTACTCTTCAGCCACTAAGGAAATAATAGCAGCAATATTAAGGTTTAAACTCCACTACATAATAGTGGCACTTATGTGACATTGTCCATAAAAAGCATTCAATTCGGAAATTTCAAGAAAAAAATGTATAGACTCACCTATTACAAGGAGAATACTAATAAAAGCACCACAGAAAAATGAAACATAAGTTTTTATTAAAAATAATAAATTTATAGCAATCTTAACATGCTGTATTTCCTGAATATCTTTGGTAACACGGCACATCTGCACCAATTCTATATCCATTCATCAAGTTTGGTTGTGCATATGCAGAATTACAATTTTTTACTTCAGAAGTTCTTGTTGTCTCTAGTATTATTGTTCTGCATAAAGCATGCATACTGAAACATTTCAAGTTAGATTTGTAAACCAAGTCTTCCATGCTTTACTTTTAACTTCCCATATTAAAATTAAAATATATTTAGCAGCATTATTTTGACATTCACCAAGTCACCATGTCGAATTCAGTGCCAAATTTCTATTTTAGATTGCAAAATAACATGTAAGCAGTACAGACATTTATGTGGTGTAGCTAGTGATGTTTGAGTATTTGAATGGTACATAAAATGGAGTGCGCTAACATTGAGTTTAATTTGCATGCCAGTTCAATTTTTGTGCATGCCATGAATAATTGCATATTTATCCTTGGGAGCATAAAGGTAAAATAACAATGCAGTAATATTTTCTTGTGGAACTTTCCTTCAACAATCAACCAAAGGATGGTCACTCATGCATAATTGCACATCCCTGTGACATAATTAATAGTTCATGGTTTTTTGGAGTTGGAAAATAAGTGACATTACCTTTGCTCGTTATGGTCATAAGATGGAGATTGCTGAAGAAAGAACCTCTCCACGAGGTTATGAAAGTACCTGCAAGCAATATCTTCAGCATCGCTTTCTCCATCTGCTGCAGCAAAGCCTTGTGCCAACCATAGCCTGACCAGCTTGTCTTTTCTAAACACATACTCCTTCGGAAACAGCGAGCAATACGAGAAACAATGTTTCAAAGGCTTCTGTAAGCTATTGTAGCTCACTAGAAGAGCAGGAAGGGTATGATCAATCACTTCATTGTTAGCCCACAAGTCACTTTGCTCAACAGTCTCCCAGTGCTTCCTATCAATTGCAATGGATAGAACACTTCCTGCTGCATTTGCAGCCAATGGCAAGCCTTTGCACTTGGCTGCAACAGATTTACCTATAGAAATCAAGCCGTCATCAATAATACTAGGATCACGGTCTTGCAAGGCAGCATTTCGGCACACAGACCAGCAGGTAGTATCAGTGAGGTACCCCAGTTGGTGTATCTTGAATGCCATCATTCGAGCAACTTTAGCACTTCTAGTCGTCACTACAATTCTACTACCAGGTGCAGCAGATTTTAGAGGAACCAGCAAGCTTGTCCAGCGGAGTAGACTCTCATCCCATACATCATCAAGAACAAGCAAGAATCGCTTTCCCTCCAGCCGTTTAGCAATGATTCGATGTAGTTGATTCATCTCAGCGAAGCCGCAAGGGGACTCCGTTGCTTCTTCAGCGAGCTTCCTTGTGAGCTTCAATACATCAAACTCTTGGCACACCCAGACCCACATTTTCATGTCAAACTTGGATCTCAAGGCCTCATCATTGTAGATGTGTTGAACCAGACTAGTCTTCCCAACACCAGCAGCGCCAACTATAGGCACAACAGAGTAGACACCCTGGCAGTTATATTCATCAGATAGGAGCAGCTTAATGACCTGCTTCTTGTCCCGCTCTCTTCCATGAAGGGAGCATTTCGTCAAACAGCTGGTCGGCGTCAGTGGGCTCGGCTCACGTCGCCTCTCCTCATCACTGCTTCGCAGCCGCAGCGCGTCCCGGTCCCTGGCGAGATCGTTGTAGCGCTCCATGATCTTCCCAATCTTGCGGTTGAGGCGATCCGGGGAGGAGGAGAAGAGCGAGCTGAGCTCGCGCTTCCGCTTGCCGGCGCTGGACCGGAGGAGCTGGAGCTTGAACCGCTCGAGGCGGGACGCGCGGAGCGCCTCGAACTCGAGCTCCTCGAGCACGTCCTCGGCCATGCGCTCCAGGTCCTCCAGCTCCCGCAGCCACAGCCTGACGAAGTCATCGGTGACCACGCGCTCCTCGGCGGCCCGGAGCGCCGCGCGGATGCGCCTGAGCCCGTCGATCTCCGCGCCGTCAAGCGCCACCGCCTCGGAGGCGCGGCCGAACGGCTGCAGCAGCGGCGCGGCCAGCCGCTTGGCCCGGAACGCGAAGTCGTCCAGCACGTCGCGCAGCTCGTCCACCATCCTTTCGCCGCCGCAGCGCGCCATGGACAGGGATCGGAACCGGAGCTCCGATTACTCTGGCAATTCTAATCGAGACAGGAGTAGCACGGATGAGATCAGTGAGGTGAGCGAGCGAGCGAGCGCTCTTTGACCGGCCGGCCATCCGCGATGCGAGGACGTTGACGATAGAGAGTTGACCAAGAATTTTACTCCGGGCGACGCAGCGTGAGGACGAAACGGGCAGGCGTGAAGGCCTCGGTGGGCCAAATGTTCAAGCGTGATGGGCCAGTCCAGTCGGAGCCCACCACTAGTGAGTTTTCTCGATGGAC
More
|
||||||||||
| CDS seq | ATGGCGCGCTGCGGCGGCGAAAGGATGGTGGACGAGCTGCGCGACGTGCTGGACGACTTCGCGTTCCGGGCCAAGCGGCTGGCCGCGCCGCTGCTGCAGCCGTTCGGCCGCGCCTCCGAGGCGGTGGCGCTTGACGGCGCGGAGATCGACGGGCTCAGGCGCATCCGCGCGGCGCTCCGGGCCGCCGAGGAGCGCGTGGTCACCGATGACTTCGTCAGGCTGTGGCTGCGGGAGCTGGAGGACCTGGAGCGCATGGCCGAGGACGTGCTCGAGGAGCTCGAGTTCGAGGCGCTCCGCGCGTCCCGCCTCGAGCGGTTCAAGCTCCAGCTCCTCCGGTCCAGCGCCGGCAAGCGGAAGCGCGAGCTCAGCTCGCTCTTCTCCTCCTCCCCGGATCGCCTCAACCGCAAGATTGGGAAGATCATGGAGCGCTACAACGATCTCGCCAGGGACCGGGACGCGCTGCGGCTGCGAAGCAGTGATGAGGAGAGGCGACGTGAGCCGAGCCCACTGACGCCGACCAGCTGTTTGACGAAATGCTCCCTTCATGGAAGAGAGCGGGACAAGAAGCAGGTCATTAAGCTGCTCCTATCTGATGAATATAACTGCCAGGGTGTCTACTCTGTTGTGCCTATAGTTGGCGCTGCTGGTGTTGGGAAGACTAGTCTGGTTCAACACATCTACAATGATGAGGCCTTGAGATCCAAGTTTGACATGAAAATGTGGGTCTGGGTGTGCCAAGAGTTTGATGTATTGAAGCTCACAAGGAAGCTCGCTGAAGAAGCAACGGAGTCCCCTTGCGGCTTCGCTGAGATGAATCAACTACATCGAATCATTGCTAAACGGCTGGAGGGAAAGCGATTCTTGCTTGTTCTTGATGATGTATGGGATGAGAGTCTACTCCGCTGGACAAGCTTGCTGGTTCCTCTAAAATCTGCTGCACCTGGTAGTAGAATTGTAGTGACGACTAGAAGTGCTAAAGTTGCTCGAATGATGGCATTCAAGATACACCAACTGGGGTACCTCACTGATACTACCTGCTGGTCTGTGTGCCGAAATGCTGCCTTGCAAGACCGTGATCCTAGTATTATTGATGACGGCTTGATTTCTATAGGTAAATCTGTTGCAGCCAAGTGCAAAGGCTTGCCATTGGCTGCAAATGCAGCAGGAAGTGTTCTATCCATTGCAATTGATAGGAAGCACTGGGAGACTGTTGAGCAAAGTGACTTGTGGGCTAACAATGAAGTGATTGATCATACCCTTCCTGCTCTTCTAGTGAGCTACAATAGCTTACAGAAGCCTTTGAAACATTGTTTCTCGTATTGCTCGCTGTTTCCGAAGGAGTATGTGTTTAGAAAAGACAAGCTGGTCAGGCTATGGTTGGCACAAGGCTTTGCTGCAGCAGATGGAGAAAGCGATGCTGAAGATATTGCTTGCAGGTACTTTCATAACCTCGTGGAGAGGTTCTTTCTTCAGCAATCTCCATCTTATGACCATAACGAGCAAAGGTATGTCATGCATGATCTCTACCATGAGCTTGCTGAGTACGTAGCAGCCGATGAGTACTCTAGAATAGAGAGATTTACATTGAGCAACGTAAATGGAGAAGCTCGCCATCTATCCTTGACTCCAAGCGAGACTCATTCTCATGAAATAGGAGAATTTCATGCATCCAATAACAAATATATGAATGAATCCCAATACCCTGGCCTGCGAACTTTGCTGGTTGTCCAGAGAACCAAACATGACGATGGAAGAAAAACTTCGAGCATACAAAAACCAAGTGTTCTGTTCAAAGCTTTTGTATGTTTAAGGGCTCTGGATTTGAGTAATACTGACATGGAGGGCCTGCCAAACTCTATTGGGGAACTGATACACCTTAGGTACCTCAGTCTTGAGAACACCAAAATCAAGTGCCTGCCAGAGTCAATAAGTTCTCTATTCAAGTTGCACACGATGAACCTCAAGTGTTGCAACTATCTTAGTGAGCTGCCACAAGGGATAAAATTCCTTGCTAACTTAAGGCATCTTGAACTACCACGCATAGATAACTGGAATGTGTACATGCCATGTGGAATTTCTGAATTAACTAATCTCCAAACAATGCACACGATCAAGTTCACAAGTGATTCAGGAAGTTGTGGGATTGCTGACTTGGTTAACTTGGACAATCTTAGAGGTGAGCTGTGCATATCAGGCATAGAGAACGTAAGCAAAGAACAAATTGCTACAGAAGCTATCATGAAGAACAAAGGTGAATTGCGTAAGTTGGTACTCCAGTGGTCACACAATGACTCCATGTTTGCTAATGACGCATCATCTGTGTTGGACAGCCTTCAACCCCACCCTGCTCTGGAGGAACTCATTATCATGGGCTTTTTTGGTGTCAAATTTCCTGTATGGATGGGGAGCCAGTGCTCGTTTAAATTGTCCTTCCTAGAGCTGAAAGATTGTCGGAATTGTAAAGAATTGCCATCTCTTGGTCTATTACCCTGTCTGAAACATCTTTTCATCAACTCACTCACCAGCATCAAGCACGTGAGACGGATGTTATCTAGCGGTGATCATACTAGCTCTGGTGATTTTCAGTCCAGGATTGCTTTTCCTACATTGGAGACACTGAAATTCACAGACATGGAATCTTGGGAGCATTGGGATGAAACTGAGGCTACAGACTTCCCTTGTCTCCGACACCTTACCATTTTGAATTGTAGCAAACTAACGGGGTTGCCCAAGCTTCTGGCATTGGTAGATCTGCGAATAAAAAATTGTGAGTGTCTACTCGACTTGCCAAGTTTCCCATCCCTCCAGTGCATTAAAATGGAGGGTTTCTGCCGTGTCAACCATTTGTTGCAACTCCCTCTATTCTCTCAGCTTGAGATGCTAGAACTTCGGTGTCACAAAAAACTCGTATCGCTGAGAAAACTCCAGCATATTTCCCCATTTCACAGTTTGAGATTGAGAAAAGAACTAGTACAAAAGGTATCAGGTTGTGAAGTGTTGCCATTCCAGAATCCCTCTGTTCAAGATAGTCAGAAAACTTGGACATTTTTAAGGTGTGCCGGGCAAATCCTTGAATGTAATGTTGTTGCTTGTACTGATCTTACCTTCGGCCAGACGAATGTCCACTCTTCTGAAGAGGAAATCGGCAATGGTGTAATATTCCACATAGGACAGGATGAAGCTGTTGAGCTTGTATCCTGCAAACCGGTTTGGGTCCAAATAGGCCAGCCAGAGGAGGTTGAGATTATTTGCATAGACTAG
More
|
||||||||||
| Protein seq | MARCGGERMVDELRDVLDDFAFRAKRLAAPLLQPFGRASEAVALDGAEIDGLRRIRAALRAAEERVVTDDFVRLWLRELEDLERMAEDVLEELEFEALRASRLERFKLQLLRSSAGKRKRELSSLFSSSPDRLNRKIGKIMERYNDLARDRDALRLRSSDEERRREPSPLTPTSCLTKCSLHGRERDKKQVIKLLLSDEYNCQGVYSVVPIVGAAGVGKTSLVQHIYNDEALRSKFDMKMWVWVCQEFDVLKLTRKLAEEATESPCGFAEMNQLHRIIAKRLEGKRFLLVLDDVWDESLLRWTSLLVPLKSAAPGSRIVVTTRSAKVARMMAFKIHQLGYLTDTTCWSVCRNAALQDRDPSIIDDGLISIGKSVAAKCKGLPLAANAAGSVLSIAIDRKHWETVEQSDLWANNEVIDHTLPALLVSYNSLQKPLKHCFSYCSLFPKEYVFRKDKLVRLWLAQGFAAADGESDAEDIACRYFHNLVERFFLQQSPSYDHNEQRYVMHDLYHELAEYVAADEYSRIERFTLSNVNGEARHLSLTPSETHSHEIGEFHASNNKYMNESQYPGLRTLLVVQRTKHDDGRKTSSIQKPSVLFKAFVCLRALDLSNTDMEGLPNSIGELIHLRYLSLENTKIKCLPESISSLFKLHTMNLKCCNYLSELPQGIKFLANLRHLELPRIDNWNVYMPCGISELTNLQTMHTIKFTSDSGSCGIADLVNLDNLRGELCISGIENVSKEQIATEAIMKNKGELRKLVLQWSHNDSMFANDASSVLDSLQPHPALEELIIMGFFGVKFPVWMGSQCSFKLSFLELKDCRNCKELPSLGLLPCLKHLFINSLTSIKHVRRMLSSGDHTSSGDFQSRIAFPTLETLKFTDMESWEHWDETEATDFPCLRHLTILNCSKLTGLPKLLALVDLRIKNCECLLDLPSFPSLQCIKMEGFCRVNHLLQLPLFSQLEMLELRCHKKLVSLRKLQHISPFHSLRLRKELVQKVSGCEVLPFQNPSVQDSQKTWTFLRCAGQILECNVVACTDLTFGQTNVHSSEEEIGNGVIFHIGQDEAVELVSCKPVWVQIGQPEEVEIICID |
||||||||||
| Function | Putative disease resistance RPP13-like protein 1 [UniProtKB/Swiss-Prot:Q9LRR4] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsZS97_04G0402500 | OsZS97_04T0402500.1 | Chr04 | 27131327 | 27136538 | - | makerRMon | ||
| CDS seq | ATGGCGCGCTGCGGCGGCGAAAGGATGGTGGACGAGCTGCGCGACGTGCTGGACGACTTCGCGTTCCGGGCCAAGCGGCTGGCCGCGCCGCTGCTGCAGCCGTTCGGCCGCGCCTCCGAGGCGGTGGCGCTTGACGGCGCGGAGATCGACGGGCTCAGGCGCATCCGCGCGGCGCTCCGGGCCGCCGAGGAGCGCGTGGTCACCGATGACTTCGTCAGGCTGTGGCTGCGGGAGCTGGAGGACCTGGAGCGCATGGCCGAGGACGTGCTCGAGGAGCTCGAGTTCGAGGCGCTCCGCGCGTCCCGCCTCGAGCGGTTCAAGCTCCAGCTCCTCCGGTCCAGCGCCGGCAAGCGGAAGCGCGAGCTCAGCTCGCTCTTCTCCTCCTCCCCGGATCGCCTCAACCGCAAGATTGGGAAGATCATGGAGCGCTACAACGATCTCGCCAGGGACCGGGACGCGCTGCGGCTGCGAAGCAGTGATGAGGAGAGGCGACGTGAGCCGAGCCCACTGACGCCGACCAGCTGTTTGACGAAATGCTCCCTTCATGGAAGAGAGCGGGACAAGAAGCAGGTCATTAAGCTGCTCCTATCTGATGAATATAACTGCCAGGGTGTCTACTCTGTTGTGCCTATAGTTGGCGCTGCTGGTGTTGGGAAGACTAGTCTGGTTCAACACATCTACAATGATGAGGCCTTGAGATCCAAGTTTGACATGAAAATGTGGGTCTGGGTGTGCCAAGAGTTTGATGTATTGAAGCTCACAAGGAAGCTCGCTGAAGAAGCAACGGAGTCCCCTTGCGGCTTCGCTGAGATGAATCAACTACATCGAATCATTGCTAAACGGCTGGAGGGAAAGCGATTCTTGCTTGTTCTTGATGATGTATGGGATGAGAGTCTACTCCGCTGGACAAGCTTGCTGGTTCCTCTAAAATCTGCTGCACCTGGTAGTAGAATTGTAGTGACGACTAGAAGTGCTAAAGTTGCTCGAATGATGGCATTCAAGATACACCAACTGGGGTACCTCACTGATACTACCTGCTGGTCTGTGTGCCGAAATGCTGCCTTGCAAGACCGTGATCCTAGTATTATTGATGACGGCTTGATTTCTATAGGTAAATCTGTTGCAGCCAAGTGCAAAGGCTTGCCATTGGCTGCAAATGCAGCAGGAAGTGTTCTATCCATTGCAATTGATAGGAAGCACTGGGAGACTGTTGAGCAAAGTGACTTGTGGGCTAACAATGAAGTGATTGATCATACCCTTCCTGCTCTTCTAGTGAGCTACAATAGCTTACAGAAGCCTTTGAAACATTGTTTCTCGTATTGCTCGCTGTTTCCGAAGGAGTATGTGTTTAGAAAAGACAAGCTGGTCAGGCTATGGTTGGCACAAGGCTTTGCTGCAGCAGATGGAGAAAGCGATGCTGAAGATATTGCTTGCAGGTACTTTCATAACCTCGTGGAGAGGTTCTTTCTTCAGCAATCTCCATCTTATGACCATAACGAGCAAAGGTATGTCATGCATGATCTCTACCATGAGCTTGCTGAGTACGTAGCAGCCGATGAGTACTCTAGAATAGAGAGATTTACATTGAGCAACGTAAATGGAGAAGCTCGCCATCTATCCTTGACTCCAAGCGAGACTCATTCTCATGAAATAGGAGAATTTCATGCATCCAATAACAAATATATGAATGAATCCCAATACCCTGGCCTGCGAACTTTGCTGGTTGTCCAGAGAACCAAACATGACGATGGAAGAAAAACTTCGAGCATACAAAAACCAAGTGTTCTGTTCAAAGCTTTTGTATGTTTAAGGGCTCTGGATTTGAGTAATACTGACATGGAGGGCCTGCCAAACTCTATTGGGGAACTGATACACCTTAGGTACCTCAGTCTTGAGAACACCAAAATCAAGTGCCTGCCAGAGTCAATAAGTTCTCTATTCAAGTTGCACACGATGAACCTCAAGTGTTGCAACTATCTTAGTGAGCTGCCACAAGGGATAAAATTCCTTGCTAACTTAAGGCATCTTGAACTACCACGCATAGATAACTGGAATGTGTACATGCCATGTGGAATTTCTGAATTAACTAATCTCCAAACAATGCACACGATCAAGTTCACAAGTGATTCAGGAAGTTGTGGGATTGCTGACTTGGTTAACTTGGACAATCTTAGAGGTGAGCTGTGCATATCAGGCATAGAGAACGTAAGCAAAGAACAAATTGCTACAGAAGCTATCATGAAGAACAAAGGTGAATTGCGTAAGTTGGTACTCCAGTGGTCACACAATGACTCCATGTTTGCTAATGACGCATCATCTGTGTTGGACAGCCTTCAACCCCACCCTGCTCTGGAGGAACTCATTATCATGGGCTTTTTTGGTGTCAAATTTCCTGTATGGATGGGGAGCCAGTGCTCGTTTAAATTGTCCTTCCTAGAGCTGAAAGATTGTCGGAATTGTAAAGAATTGCCATCTCTTGGTCTATTACCCTGTCTGAAACATCTTTTCATCAACTCACTCACCAGCATCAAGCACGTGAGACGGATGTTATCTAGCGGTGATCATACTAGCTCTGGTGATTTTCAGTCCAGGATTGCTTTTCCTACATTGGAGACACTGAAATTCACAGACATGGAATCTTGGGAGCATTGGGATGAAACTGAGGCTACAGACTTCCCTTGTCTCCGACACCTTACCATTTTGAATTGTAGCAAACTAACGGGGTTGCCCAAGCTTCTGGCATTGGTAGATCTGCGAATAAAAAATTGTGAGTGTCTACTCGACTTGCCAAGTTTCCCATCCCTCCAGTGCATTAAAATGGAGGGTTTCTGCCGTGTCAACCATTTGTTGCAACTCCCTCTATTCTCTCAGCTTGAGATGCTAGAACTTCGGTGTCACAAAAAACTCGTATCGCTGAGAAAACTCCAGCATATTTCCCCATTTCACAGTTTGAGATTGAGAAAAGAACTAGTACAAAAGGTATCAGGTTGTGAAGTGTTGCCATTCCAGAATCCCTCTGTTCAAGATAGTCAGAAAACTTGGACATTTTTAAGGTGTGCCGGGCAAATCCTTGAATGTAATGTTGTTGCTTGTACTGATCTTACCTTCGGCCAGACGAATGTCCACTCTTCTGAAGAGGAAATCGGCAATGGTGTAATATTCCACATAGGACAGGATGAAGCTGTTGAGCTTGTATCCTGCAAACCGGTTTGGGTCCAAATAGGCCAGCCAGAGGAGGTTGAGATTATTTGCATAGACTAG
More
|
|||||||
| Protein seq | MARCGGERMVDELRDVLDDFAFRAKRLAAPLLQPFGRASEAVALDGAEIDGLRRIRAALRAAEERVVTDDFVRLWLRELEDLERMAEDVLEELEFEALRASRLERFKLQLLRSSAGKRKRELSSLFSSSPDRLNRKIGKIMERYNDLARDRDALRLRSSDEERRREPSPLTPTSCLTKCSLHGRERDKKQVIKLLLSDEYNCQGVYSVVPIVGAAGVGKTSLVQHIYNDEALRSKFDMKMWVWVCQEFDVLKLTRKLAEEATESPCGFAEMNQLHRIIAKRLEGKRFLLVLDDVWDESLLRWTSLLVPLKSAAPGSRIVVTTRSAKVARMMAFKIHQLGYLTDTTCWSVCRNAALQDRDPSIIDDGLISIGKSVAAKCKGLPLAANAAGSVLSIAIDRKHWETVEQSDLWANNEVIDHTLPALLVSYNSLQKPLKHCFSYCSLFPKEYVFRKDKLVRLWLAQGFAAADGESDAEDIACRYFHNLVERFFLQQSPSYDHNEQRYVMHDLYHELAEYVAADEYSRIERFTLSNVNGEARHLSLTPSETHSHEIGEFHASNNKYMNESQYPGLRTLLVVQRTKHDDGRKTSSIQKPSVLFKAFVCLRALDLSNTDMEGLPNSIGELIHLRYLSLENTKIKCLPESISSLFKLHTMNLKCCNYLSELPQGIKFLANLRHLELPRIDNWNVYMPCGISELTNLQTMHTIKFTSDSGSCGIADLVNLDNLRGELCISGIENVSKEQIATEAIMKNKGELRKLVLQWSHNDSMFANDASSVLDSLQPHPALEELIIMGFFGVKFPVWMGSQCSFKLSFLELKDCRNCKELPSLGLLPCLKHLFINSLTSIKHVRRMLSSGDHTSSGDFQSRIAFPTLETLKFTDMESWEHWDETEATDFPCLRHLTILNCSKLTGLPKLLALVDLRIKNCECLLDLPSFPSLQCIKMEGFCRVNHLLQLPLFSQLEMLELRCHKKLVSLRKLQHISPFHSLRLRKELVQKVSGCEVLPFQNPSVQDSQKTWTFLRCAGQILECNVVACTDLTFGQTNVHSSEEEIGNGVIFHIGQDEAVELVSCKPVWVQIGQPEEVEIICID
More
|
|||||||
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsZS97_04G0402500 | OsZS97_04T0402500.2 | Chr04 | 27131327 | 27136538 | - | makerRMon | ||
| CDS seq | ATGGCGCGCTGCGGCGGCGAAAGGATGGTGGACGAGCTGCGCGACGTGCTGGACGACTTCGCGTTCCGGGCCAAGCGGCTGGCCGCGCCGCTGCTGCAGCCGTTCGGCCGCGCCTCCGAGGCGGTGGCGCTTGACGGCGCGGAGATCGACGGGCTCAGGCGCATCCGCGCGGCGCTCCGGGCCGCCGAGGAGCGCGTGGTCACCGATGACTTCGTCAGGCTGTGGCTGCGGGAGCTGGAGGACCTGGAGCGCATGGCCGAGGACGTGCTCGAGGAGCTCGAGTTCGAGGCGCTCCGCGCGTCCCGCCTCGAGCGGTTCAAGCTCCAGCTCCTCCGGTCCAGCGCCGGCAAGCGGAAGCGCGAGCTCAGCTCGCTCTTCTCCTCCTCCCCGGATCGCCTCAACCGCAAGATTGGGAAGATCATGGAGCGCTACAACGATCTCGCCAGGGACCGGGACGCGCTGCGGCTGCGAAGCAGTGATGAGGAGAGGCGACGTGAGCCGAGCCCACTGACGCCGACCAGCTGTTTGACGAAATGCTCCCTTCATGGAAGAGAGCGGGACAAGAAGCAGGTCATTAAGCTGCTCCTATCTGATGAATATAACTGCCAGGGTGTCTACTCTGTTGTGCCTATAGTTGGCGCTGCTGGTGTTGGGAAGACTAGTCTGGTTCAACACATCTACAATGATGAGGCCTTGAGATCCAAGTTTGACATGAAAATGTGGGTCTGGGTGTGCCAAGAGTTTGATGTATTGAAGCTCACAAGGAAGCTCGCTGAAGAAGCAACGGAGTCCCCTTGCGGCTTCGCTGAGATGAATCAACTACATCGAATCATTGCTAAACGGCTGGAGGGAAAGCGATTCTTGCTTGTTCTTGATGATGTATGGGATGAGAGTCTACTCCGCTGGACAAGCTTGCTGGTTCCTCTAAAATCTGCTGCACCTGGTAGTAGAATTGTAGTGACGACTAGAAGTGCTAAAGTTGCTCGAATGATGGCATTCAAGATACACCAACTGGGGTACCTCACTGATACTACCTGCTGGTCTGTGTGCCGAAATGCTGCCTTGCAAGACCGTGATCCTAGTATTATTGATGACGGCTTGATTTCTATAGGTAAATCTGTTGCAGCCAAGTGCAAAGGCTTGCCATTGGCTGCAAATGCAGCAGGAAGTGTTCTATCCATTGCAATTGATAGGAAGCACTGGGAGACTGTTGAGCAAAGTGACTTGTGGGCTAACAATGAAGTGATTGATCATACCCTTCCTGCTCTTCTAGTGAGCTACAATAGCTTACAGAAGCCTTTGAAACATTGTTTCTCGTATTGCTCGCTGTTTCCGAAGGAGTATGTGTTTAGAAAAGACAAGCTGGTCAGGCTATGGTTGGCACAAGGCTTTGCTGCAGCAGATGGAGAAAGCGATGCTGAAGATATTGCTTGCAGGTACTTTCATAACCTCGTGGAGAGGTTCTTTCTTCAGCAATCTCCATCTTATGACCATAACGAGCAAAGGTATGTCATGCATGATCTCTACCATGAGCTTGCTGAGTACGTAGCAGCCGATGAGTACTCTAGAATAGAGAGATTTACATTGAGCAACGTAAATGGAGAAGCTCGCCATCTATCCTTGACTCCAAGCGAGACTCATTCTCATGAAATAGGAGAATTTCATGCATCCAATAACAAATATATGAATGAATCCCAATACCCTGGCCTGCGAACTTTGCTGGTTGTCCAGAGAACCAAACATGACGATGGAAGAAAAACTTCGAGCATACAAAAACCAAGTGTTCTGTTCAAAGCTTTTGTATGTTTAAGGGCTCTGGATTTGAGTAATACTGACATGGAGGGCCTGCCAAACTCTATTGGGGAACTGATACACCTTAGGTACCTCAGTCTTGAGAACACCAAAATCAAGTGCCTGCCAGAGTCAATAAGTTCTCTATTCAAGTTGCACACGATGAACCTCAAGTGTTGCAACTATCTTAGTGAGCTGCCACAAGGGATAAAATTCCTTGCTAACTTAAGGCATCTTGAACTACCACGCATAGATAACTGGAATGTGTACATGCCATGTGGAATTTCTGAATTAACTAATCTCCAAACAATGCACACGATCAAGTTCACAAGTGATTCAGGAAGTTGTGGGATTGCTGACTTGGTTAACTTGGACAATCTTAGAGGTGAGCTGTGCATATCAGGCATAGAGAACGTAAGCAAAGAACAAATTGCTACAGAAGCTATCATGAAGAACAAAGCCTTCAACCCCACCCTGCTCTGGAGGAACTCATTATCATGGGCTTTTTTGGTGTCAAATTTCCTGTATGGATGGGGAGCCAGTGCTCGTTTAAATTGTCCTTCCTAG
More
|
|||||||
| Protein seq | MARCGGERMVDELRDVLDDFAFRAKRLAAPLLQPFGRASEAVALDGAEIDGLRRIRAALRAAEERVVTDDFVRLWLRELEDLERMAEDVLEELEFEALRASRLERFKLQLLRSSAGKRKRELSSLFSSSPDRLNRKIGKIMERYNDLARDRDALRLRSSDEERRREPSPLTPTSCLTKCSLHGRERDKKQVIKLLLSDEYNCQGVYSVVPIVGAAGVGKTSLVQHIYNDEALRSKFDMKMWVWVCQEFDVLKLTRKLAEEATESPCGFAEMNQLHRIIAKRLEGKRFLLVLDDVWDESLLRWTSLLVPLKSAAPGSRIVVTTRSAKVARMMAFKIHQLGYLTDTTCWSVCRNAALQDRDPSIIDDGLISIGKSVAAKCKGLPLAANAAGSVLSIAIDRKHWETVEQSDLWANNEVIDHTLPALLVSYNSLQKPLKHCFSYCSLFPKEYVFRKDKLVRLWLAQGFAAADGESDAEDIACRYFHNLVERFFLQQSPSYDHNEQRYVMHDLYHELAEYVAADEYSRIERFTLSNVNGEARHLSLTPSETHSHEIGEFHASNNKYMNESQYPGLRTLLVVQRTKHDDGRKTSSIQKPSVLFKAFVCLRALDLSNTDMEGLPNSIGELIHLRYLSLENTKIKCLPESISSLFKLHTMNLKCCNYLSELPQGIKFLANLRHLELPRIDNWNVYMPCGISELTNLQTMHTIKFTSDSGSCGIADLVNLDNLRGELCISGIENVSKEQIATEAIMKNKAFNPTLLWRNSLSWAFLVSNFLYGWGASARLNCPS
More
|
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 1.239795 | 11.2218125 | 4.4612115 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_04g0512900 | RBH | 0.670620 | 0.138024 | 1.098016 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os04g43340 | RBH | 0.453258 | 0.092781 | 0.282495 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os04g0512900 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_04g0019740 | RBH | 0.0 | 4.333783 | 0.700201 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_04g0020530 | RBH | 0.000000 | 0.880847 | 0.221434 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_04g0020240 | RBH | 0.698612 | 0.616387 | 0.726146 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_04g0019960 | RBH | 0.000000 | 0.086293 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_04g0020170 | RBH | 1.447105 | 0.954690 | 2.818251 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_04G0402000 | RBH | 1.2861005 | 9.7204 | 2.2288775 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_04g0018970 | RBH | 0.111075 | 0.265926 | 0.085185 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_02G0436300 | RBH | 0.321953 | 1.0772605 | 1.37528 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_04g0019450 | RBH | 0.000000 | 0.046164 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_04g0019300 | RBH | 0.0 | 3.338167 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_04g0019420 | RBH | 0.0 | 15.531773 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_04g0019800 | RBH | 0.101584 | 0.265754 | 0.249739 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_04g0019960 | RBH | 0.020658 | 3.344111 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_04G019240 | RBH | 0.0 | 0.0 | 0.078721 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_04g0019200 | RBH | 0.174074 | 0.000000 | 0.0 |
