Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsZS97_04G0268100 | OGI:04054340 | 3/16 | Zhenshan 97 | ZS97RS3 | HZAU | Chr04:18295822-18298750 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | TCAATCAGTATCAGTTTTTTCATCATCAGACTTATCAGACCTAGTCGGCCGAAGGTCGACATCTTGGAATCTCTCAACTACATCAGCAGTAATCTTGTCAGCCGCTTTCTGCGCATCACTGATGAGGTCAAGAGCAGCTTCTTCGCTCGTCTCGTCTGCAAAGCCATCAATGGCATCAATGTCAACTCTTGGATAAAGGGATTTGGTCATCGCCAACGCCAGACTTGCTCCCATACTTCCAGCTTCTTTGATGTTCTTGAAGTAAGTATCTGGAGAGACTCTCAGCTTGTCGAAGATTTCGGCAGCATCAAGTGTACTCGAACTGGTATTATTGAAGAACATGGCCTGGATAAGTGGAGTAGTGGCATTAGCGACTTTATCCCTGGCTCCTTCAAGCTTGTTGATCTTGTCAACTAAGACATCAAATTGTGCTTAAGACTTGATCTTGCGGTCTGCGTCAACAGATTCACATTAATGAATCAGCATATAGAAGATAATGCCTTTTGAGGTATTGATTATTGGTACCTTCAACTGCCTTTAAAGCCGAATCCCTCTGTCTTGCCAGCTCTGCCTTGTCATTTTCCAGAGTTTGGATCTGCTTCTCTAGTTGAGATATCTTGGCAGCTTGCACTACATTAACTTCGGTTAATCAAGATTACAGAGATAACAGCACAAATCAGTTGGGCAGAGTTTGCGCGAACCTTTTGATGAGCCACTCAGTTCGAAATTGGACTCCTGGAGCTCAGCAATCCGATCCCTCAGATCGTGTTCATTCTTCTTGGCAAGTTCTCTGGCCTCGTGCAGTTGACTCCTGGTGGCTTCGAGGGTTCCAAGATGAGGAACTAGTCTCTCTAGGGTTGCGGTTTTCGCCTCGTTCCTAAGATGAATCCTCTGCGGAGCAGTTTAATCAGTGCTCGAGCCAGACGGTAAACAAGATGGCTGAGGTCAGGCGTCAAGGAACTTACATTTACAATGCGAGTCGCTTGGTTGAGTGCCTTTTTCAGTAGGCATACCTCTTCATCTTCTTTTTGCCGGTTTATTACAATTCCTTGAGGTTGCAAGTTGTCATCCCACCACTTGACCAGAATAGGAGGGCACGAATCTTTGGCTGCTTGTATACGATGAATTTCTTTTTCATCACCGATCATTGGTCCTAATGCATCCATTGACAAAGGTTAGACAATCGATCAGAGTTATTTGGGTCAACATGGTTTCAGACAAAGTGTTTACCTGTAATGATTTTTGGACAAGGACGAGTGGATTCGGATACTTTTAAAGGGGATCCAGATCTCCGGTCATTGCTGGCGTCTTGTCTGCGAGGGTTGTCTGCTTGGGTTTCGACTTCTGGAATCTCTTGGCTTGGCCCTGCGTCCGACTGGTTTCCAGTCGGGGGCTCCTGATTAACTCCGGCTTCGGCTTCGGCCGACTGGATTCCAGTCGGGGGTTGATCACCGGATTCTACATTATCGGTTGCCGGTTGATTGTCACTCGGATGATCCTCAGCAGTTGGCTCGGTTTCTTTGGAAGAACTTGTGTCCACGTTAGTCGGGTCAGAGTCTTTCCCAGACGGATCTATATCAGATGGTTTCCTGCAAATTTGATTATCAGTATTATTGCCGCAATGGGTGCGCATCAATGCAAGAGAGATCGTTATATGAGTTGCACCTAGAAGACTTCCTGATCTTTGGCACAGGGCGACTGGATGTTTTCTTCCTTGGAGTAGCCTGTTTTGGTAGTTTCTTGGTTGTCTCTCGGTCTCCAGGCCTCCTGGCGGTATCATCGGCTTCGTCGTCACTTAGAACCAGCTTCCTCTTTCGAGAATCTGACTGGCCAATTGGATCAGAAGCACTTGGTTGAGTTTCAGACCTAATTCTTGGTCCTCCGCTCCCTTGCCCAGTTTGGTGGCGGGGCGATCGGCGTTGAGCGATTGGGGGATCCGACTTCATCAAAGCAAATTCCTGGGTGTAATATCCTTCATTGTTAACTGATTCAATAAGAAAGCAAGATCATATTTTGAGAAAGGTTGAAGTGTATGAATACGTACCGGTGGAGGAGGATTGAATGCATTGAACGGTACGACTAGCAGCAAGTGTGAGTAGCTGACAACGATGGCGTTTGAGAAGATCTTATACATCCTTTCCTTCATGACCTTGAAGTCAAGAGAATCTGGATCTTCACGGTTTGGGTCATGCTTGCCGTCAAATTCGAAGGCTGTGCGAGATCTTTCTTTGATTGGAGCTAACTGACACTTGATAAAGTACCGGGTAATCTGTTCTCCTTGAAGGCCCTGTTCTTTCAGCTTTATCATCCTCTCCATCAGTTCTACTGCTTGTGCAGCTTCGTCTCCCATTGGCAGTGAGTTCCAAGTATCCCGATAAACTGGAGGAAGACAGGAGTATTCGGGAAGAACAGGCTCGGGGTTTTGAACATAAAACCAATTTGCGTGCCAGCCTTTATTTGAGGTCTTGAAGGGCATGGAGAAGTATTTTTGGCTTAGTGTTCCCCTGAGTTGTAAACCAGCACCCCCAACGACGCATGGTTTACTCTTGTTTCGTTGGGGCTTGAGGAAGAAGATGCGGCGGAACAAGGCGAAATGAGGCCTAATGCCCAGAAAAGCTTCGCAGGCATGAATAAAATTGGCAATATGCACTATGGAGTTTGGATTCAGATGATGCAAGCTAATCCCGTAGAAGTTTAGAATTCCCCGGAAAAATCTTGAGGTTGGAAGAGAAAATCCGCCGTAGAAGAAATGAGCAAATACCACGATTTCGTGTGTATCGGGGGTCTGGAATGCCTCACCAAATGCCAGTCGCCACCCGATGATCTCTTTTGCTGGAAGAACGCCGTGCGCCACCATCTCCTTCAGATTGTCTTCCGTCACATCGGAGGGCGCCCACTGACTCTCGAAGCTTTCTCTTTCTTCCGCCAT
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| CDS seq | ATGGCGGAAGAAAGAGAAAGCTTCGAGAGTCAGTGGGCGCCCTCCGATGTGACGGAAGACAATCTGAAGGAGATGGTGGCGCACGGCGTTCTTCCAGCAAAAGAGATCATCGGGTGGCGACTGGCATTTGGTGAGGCATTCCAGACCCCCGATACACACGAAATCGTGGTATTTGCTCATTTCTTCTACGGCGGATTTTCTCTTCCAACCTCAAGATTTTTCCGGGGAATTCTAAACTTCTACGGGATTAGCTTGCATCATCTGAATCCAAACTCCATAGTGCATATTGCCAATTTTATTCATGCCTGCGAAGCTTTTCTGGGCATTAGGCCTCATTTCGCCTTGTTCCGCCGCATCTTCTTCCTCAAGCCCCAACGAAACAAGAGTAAACCATGCGTCGTTGGGGGTGCTGGTTTACAACTCAGGGGAACACTAAGCCAAAAATACTTCTCCATGCCCTTCAAGACCTCAAATAAAGGCTGGCACGCAAATTGGTTTTATGTTCAAAACCCCGAGCCTGTTCTTCCCGAATACTCCTGTCTTCCTCCAGTTTATCGGGATACTTGGAACTCACTGCCAATGGGAGACGAAGCTGCACAAGCAGTAGAACTGATGGAGAGGATGATAAAGCTGAAAGAACAGGGCCTTCAAGGAGAACAGATTACCCGGTACTTTATCAAGTGTCAGTTAGCTCCAATCAAAGAAAGATCTCGCACAGCCTTCGAATTTGACGGCAAGCATGACCCAAACCGTGAAGATCCAGATTCTCTTGACTTCAAGGTCATGAAGGAAAGGATGTATAAGATCTTCTCAAACGCCATCGTTGTCAGCTACTCACACTTGCTGCTAGTCGTACCGTTCAATGCATTCAATCCTCCTCCACCGGAATTTGCTTTGATGAAGTCGGATCCCCCAATCGCTCAACGCCGATCGCCCCGCCACCAAACTGGGCAAGGGAGCGGAGGACCAAGAATTAGGTCTGAAACTCAACCAAGTGCTTCTGATCCAATTGGCCAGTCAGATTCTCGAAAGAGGAAGCTGGTTCTAAGTGACGACGAAGCCGATGATACCGCCAGGAGGCCTGGAGACCGAGAGACAACCAAGAAACTACCAAAACAGGCTACTCCAAGGAAGAAAACATCCAGTCGCCCTGTGCCAAAGATCAGGAAGTCTTCTAGGAAACCATCTGATATAGATCCGTCTGGGAAAGACTCTGACCCGACTAACGTGGACACAAGTTCTTCCAAAGAAACCGAGCCAACTGCTGAGGATCATCCGAGTGACAATCAACCGGCAACCGATAATGTAGAATCCGGTGATCAACCCCCGACTGGAATCCAGTCGGCCGAAGCCGAAGCCGGAGTTAATCAGGAGCCCCCGACTGGAAACCAGTCGGACGCAGGGCCAAGCCAAGAGATTCCAGAAGTCGAAACCCAAGCAGACAACCCTCGCAGACAAGACGCCAGCAATGACCGGAGATCTGGATCCCCTTTAAAAGTATCCGAATCCACTCGTCCTTGTCCAAAAATCATTACAGGACCAATGATCGGTGATGAAAAAGAAATTCATCGTATACAAGCAGCCAAAGATTCGTGCCCTCCTATTCTGGTCAAGTGGTGGGATGACAACTTGCAACCTCAAGGAATTGTAATAAACCGGCAAAAAGAAGATGAAGAGGTATGCCTACTGAAAAAGGCACTCAACCAAGCGACTCGCATTGTAAATAGGATTCATCTTAGGAACGAGGCGAAAACCGCAACCCTAGAGAGACTAGTTCCTCATCTTGGAACCCTCGAAGCCACCAGGAGTCAACTGCACGAGGCCAGAGAACTTGCCAAGAAGAATGAACACGATCTGAGGGATCGGATTGCTGAGCTCCAGGAGTCCAATTTCGAACTGAGTGGCTCATCAAAAGTGCAAGCTGCCAAGATATCTCAACTAGAGAAGCAGATCCAAACTCTGGAAAATGACAAGGCAGAGCTGGCAAGACAGAGGGATTCGGCTTTAAAGGCAGTTGAAGTTGACAAGATCAACAAGCTTGAAGGAGCCAGGGATAAAGTCGCTAATGCCACTACTCCACTTATCCAGGCCATGTTCTTCAATAATACCAGTTCGAGTACACTTGATGCTGCCGAAATCTTCGACAAGCTGAGAGTCTCTCCAGATACTTACTTCAAGAACATCAAAGAAGCTGGAAGTATGGGAGCAAGTCTGGCGTTGGCGATGACCAAATCCCTTTATCCAAGAGTTGACATTGATGCCATTGATGGCTTTGCAGACGAGACGAGCGAAGAAGCTGCTCTTGACCTCATCAGTGATGCGCAGAAAGCGGCTGACAAGATTACTGCTGATGTAGTTGAGAGATTCCAAGATGTCGACCTTCGGCCGACTAGGTCTGATAAGTCTGATGATGAAAAAACTGATACTGATTGA
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| Protein seq | MAEERESFESQWAPSDVTEDNLKEMVAHGVLPAKEIIGWRLAFGEAFQTPDTHEIVVFAHFFYGGFSLPTSRFFRGILNFYGISLHHLNPNSIVHIANFIHACEAFLGIRPHFALFRRIFFLKPQRNKSKPCVVGGAGLQLRGTLSQKYFSMPFKTSNKGWHANWFYVQNPEPVLPEYSCLPPVYRDTWNSLPMGDEAAQAVELMERMIKLKEQGLQGEQITRYFIKCQLAPIKERSRTAFEFDGKHDPNREDPDSLDFKVMKERMYKIFSNAIVVSYSHLLLVVPFNAFNPPPPEFALMKSDPPIAQRRSPRHQTGQGSGGPRIRSETQPSASDPIGQSDSRKRKLVLSDDEADDTARRPGDRETTKKLPKQATPRKKTSSRPVPKIRKSSRKPSDIDPSGKDSDPTNVDTSSSKETEPTAEDHPSDNQPATDNVESGDQPPTGIQSAEAEAGVNQEPPTGNQSDAGPSQEIPEVETQADNPRRQDASNDRRSGSPLKVSESTRPCPKIITGPMIGDEKEIHRIQAAKDSCPPILVKWWDDNLQPQGIVINRQKEDEEVCLLKKALNQATRIVNRIHLRNEAKTATLERLVPHLGTLEATRSQLHEARELAKKNEHDLRDRIAELQESNFELSGSSKVQAAKISQLEKQIQTLENDKAELARQRDSALKAVEVDKINKLEGARDKVANATTPLIQAMFFNNTSSSTLDAAEIFDKLRVSPDTYFKNIKEAGSMGASLALAMTKSLYPRVDIDAIDGFADETSEEAALDLISDAQKAADKITADVVERFQDVDLRPTRSDKSDDEKTDTD |
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| Function | - | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsZS97_04G0268100 | OsZS97_04T0268100.1 | Chr04 | 18295822 | 18298750 | - | makerRMon | ||
| CDS seq | ATGGCGGAAGAAAGAGAAAGCTTCGAGAGTCAGTGGGCGCCCTCCGATGTGACGGAAGACAATCTGAAGGAGATGGTGGCGCACGGCGTTCTTCCAGCAAAAGAGATCATCGGGTGGCGACTGGCATTTGGTGAGGCATTCCAGACCCCCGATACACACGAAATCGTGGTATTTGCTCATTTCTTCTACGGCGGATTTTCTCTTCCAACCTCAAGATTTTTCCGGGGAATTCTAAACTTCTACGGGATTAGCTTGCATCATCTGAATCCAAACTCCATAGTGCATATTGCCAATTTTATTCATGCCTGCGAAGCTTTTCTGGGCATTAGGCCTCATTTCGCCTTGTTCCGCCGCATCTTCTTCCTCAAGCCCCAACGAAACAAGAGTAAACCATGCGTCGTTGGGGGTGCTGGTTTACAACTCAGGGGAACACTAAGCCAAAAATACTTCTCCATGCCCTTCAAGACCTCAAATAAAGGCTGGCACGCAAATTGGTTTTATGTTCAAAACCCCGAGCCTGTTCTTCCCGAATACTCCTGTCTTCCTCCAGTTTATCGGGATACTTGGAACTCACTGCCAATGGGAGACGAAGCTGCACAAGCAGTAGAACTGATGGAGAGGATGATAAAGCTGAAAGAACAGGGCCTTCAAGGAGAACAGATTACCCGGTACTTTATCAAGTGTCAGTTAGCTCCAATCAAAGAAAGATCTCGCACAGCCTTCGAATTTGACGGCAAGCATGACCCAAACCGTGAAGATCCAGATTCTCTTGACTTCAAGGTCATGAAGGAAAGGATGTATAAGATCTTCTCAAACGCCATCGTTGTCAGCTACTCACACTTGCTGCTAGTCGTACCGTTCAATGCATTCAATCCTCCTCCACCGGAATTTGCTTTGATGAAGTCGGATCCCCCAATCGCTCAACGCCGATCGCCCCGCCACCAAACTGGGCAAGGGAGCGGAGGACCAAGAATTAGGTCTGAAACTCAACCAAGTGCTTCTGATCCAATTGGCCAGTCAGATTCTCGAAAGAGGAAGCTGGTTCTAAGTGACGACGAAGCCGATGATACCGCCAGGAGGCCTGGAGACCGAGAGACAACCAAGAAACTACCAAAACAGGCTACTCCAAGGAAGAAAACATCCAGTCGCCCTGTGCCAAAGATCAGGAAGTCTTCTAGGAAACCATCTGATATAGATCCGTCTGGGAAAGACTCTGACCCGACTAACGTGGACACAAGTTCTTCCAAAGAAACCGAGCCAACTGCTGAGGATCATCCGAGTGACAATCAACCGGCAACCGATAATGTAGAATCCGGTGATCAACCCCCGACTGGAATCCAGTCGGCCGAAGCCGAAGCCGGAGTTAATCAGGAGCCCCCGACTGGAAACCAGTCGGACGCAGGGCCAAGCCAAGAGATTCCAGAAGTCGAAACCCAAGCAGACAACCCTCGCAGACAAGACGCCAGCAATGACCGGAGATCTGGATCCCCTTTAAAAGTATCCGAATCCACTCGTCCTTGTCCAAAAATCATTACAGGACCAATGATCGGTGATGAAAAAGAAATTCATCGTATACAAGCAGCCAAAGATTCGTGCCCTCCTATTCTGGTCAAGTGGTGGGATGACAACTTGCAACCTCAAGGAATTGTAATAAACCGGCAAAAAGAAGATGAAGAGGTATGCCTACTGAAAAAGGCACTCAACCAAGCGACTCGCATTGTAAATAGGATTCATCTTAGGAACGAGGCGAAAACCGCAACCCTAGAGAGACTAGTTCCTCATCTTGGAACCCTCGAAGCCACCAGGAGTCAACTGCACGAGGCCAGAGAACTTGCCAAGAAGAATGAACACGATCTGAGGGATCGGATTGCTGAGCTCCAGGAGTCCAATTTCGAACTGAGTGGCTCATCAAAAGTGCAAGCTGCCAAGATATCTCAACTAGAGAAGCAGATCCAAACTCTGGAAAATGACAAGGCAGAGCTGGCAAGACAGAGGGATTCGGCTTTAAAGGCAGTTGAAGTTGACAAGATCAACAAGCTTGAAGGAGCCAGGGATAAAGTCGCTAATGCCACTACTCCACTTATCCAGGCCATGTTCTTCAATAATACCAGTTCGAGTACACTTGATGCTGCCGAAATCTTCGACAAGCTGAGAGTCTCTCCAGATACTTACTTCAAGAACATCAAAGAAGCTGGAAGTATGGGAGCAAGTCTGGCGTTGGCGATGACCAAATCCCTTTATCCAAGAGTTGACATTGATGCCATTGATGGCTTTGCAGACGAGACGAGCGAAGAAGCTGCTCTTGACCTCATCAGTGATGCGCAGAAAGCGGCTGACAAGATTACTGCTGATGTAGTTGAGAGATTCCAAGATGTCGACCTTCGGCCGACTAGGTCTGATAAGTCTGATGATGAAAAAACTGATACTGATTGA
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| Protein seq | MAEERESFESQWAPSDVTEDNLKEMVAHGVLPAKEIIGWRLAFGEAFQTPDTHEIVVFAHFFYGGFSLPTSRFFRGILNFYGISLHHLNPNSIVHIANFIHACEAFLGIRPHFALFRRIFFLKPQRNKSKPCVVGGAGLQLRGTLSQKYFSMPFKTSNKGWHANWFYVQNPEPVLPEYSCLPPVYRDTWNSLPMGDEAAQAVELMERMIKLKEQGLQGEQITRYFIKCQLAPIKERSRTAFEFDGKHDPNREDPDSLDFKVMKERMYKIFSNAIVVSYSHLLLVVPFNAFNPPPPEFALMKSDPPIAQRRSPRHQTGQGSGGPRIRSETQPSASDPIGQSDSRKRKLVLSDDEADDTARRPGDRETTKKLPKQATPRKKTSSRPVPKIRKSSRKPSDIDPSGKDSDPTNVDTSSSKETEPTAEDHPSDNQPATDNVESGDQPPTGIQSAEAEAGVNQEPPTGNQSDAGPSQEIPEVETQADNPRRQDASNDRRSGSPLKVSESTRPCPKIITGPMIGDEKEIHRIQAAKDSCPPILVKWWDDNLQPQGIVINRQKEDEEVCLLKKALNQATRIVNRIHLRNEAKTATLERLVPHLGTLEATRSQLHEARELAKKNEHDLRDRIAELQESNFELSGSSKVQAAKISQLEKQIQTLENDKAELARQRDSALKAVEVDKINKLEGARDKVANATTPLIQAMFFNNTSSSTLDAAEIFDKLRVSPDTYFKNIKEAGSMGASLALAMTKSLYPRVDIDAIDGFADETSEEAALDLISDAQKAADKITADVVERFQDVDLRPTRSDKSDDEKTDTD
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0 | 0.054531 | 0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_06g0360600 | SBH | 3.952186 | 4.299544 | 3.660229 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os04g28900 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os06g0360600 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_04G0270800 | RBH | 0 | 0.003629 | 0 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_05G0157700 | RBH | 0 | 0.014548 | 0 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_04g0008480 | SBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_04g0008530 | SBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_04g0009200 | SBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_04G008280 | SBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_04g0008350 | SBH | 0.0 | 0.0 | 0.0 |
