Basic Info |
Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
OsZS97_04G0253200 | OGI:04051970 | 16/16 | Zhenshan 97 | ZS97RS3 | HZAU | Chr04:17331564-17331978 | ||||||||
Gene Symbol | - | ||||||||||
DNA seq | TCACTCATCGGTGGCTCCAAGAACGGGGAGAGTGCTCTGAATGGTCTCCAGGTTAGGGTCCGCGCATAGCGGTAGAACCACGGCGGGGAGATCAAACATGGCACCGAACCCGATGCGCAATCTGACCGCCACCATGATCTCTACCACGCTGACTGGGAGGTTGTCTGGATGAGTCCGGGTGGCGTCTTGGCGGCCGGAGTAGAGCCATGCACCCCCAACCTTGACGGCTGAGGGGAGCGATCCGGCGGTGGAGGTAATCGGCAGCCACCATAGACGCTGTCAATCCATTGTCCACCAGTAGGTTGACGCGGGTAAGGACCGGCTCTAGGCGTGGGTCGAGGGCCGGCGCGTCAGTCCAAGTTGGCTGCCAGTAAGCCGGTTGAACTGGAAGTTGAAGCCGGTCATGGGTCTCCAT
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CDS seq | ATGGAGACCCATGACCGGCTTCAACTTCCAGTTCAACCGGCTTACTGGCAGCCAACTTGGACTGACGCGCCGGCCCTCGACCCACGCCTAGAGCCGGTCCTTACCCGCGTCAACCTACTGGTGGACAATGGATTGACAGCGTCTATGGTGGCTGCCGATTACCTCCACCGCCGGATCGCTCCCCTCAGCCGTCAAGACAACCTCCCAGTCAGCGTGGTAGAGATCATGGTGGCGGTCAGATTGCGCATCGGGTTCGGTGCCATGTTTGATCTCCCCGCCGTGGTTCTACCGCTATGCGCGGACCCTAACCTGGAGACCATTCAGAGCACTCTCCCCGTTCTTGGAGCCACCGATGAGTGA |
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Protein seq | METHDRLQLPVQPAYWQPTWTDAPALDPRLEPVLTRVNLLVDNGLTASMVAADYLHRRIAPLSRQDNLPVSVVEIMVAVRLRIGFGAMFDLPAVVLPLCADPNLETIQSTLPVLGATDE |
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Function | - |
Transcripts
Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
OsZS97_04G0253200 | OsZS97_04T0253200.1 | Chr04 | 17331564 | 17331978 | - | makerRMon | ||
CDS seq | ATGGAGACCCATGACCGGCTTCAACTTCCAGTTCAACCGGCTTACTGGCAGCCAACTTGGACTGACGCGCCGGCCCTCGACCCACGCCTAGAGCCGGTCCTTACCCGCGTCAACCTACTGGTGGACAATGGATTGACAGCGTCTATGGTGGCTGCCGATTACCTCCACCGCCGGATCGCTCCCCTCAGCCGTCAAGACAACCTCCCAGTCAGCGTGGTAGAGATCATGGTGGCGGTCAGATTGCGCATCGGGTTCGGTGCCATGTTTGATCTCCCCGCCGTGGTTCTACCGCTATGCGCGGACCCTAACCTGGAGACCATTCAGAGCACTCTCCCCGTTCTTGGAGCCACCGATGAGTGA
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Protein seq | METHDRLQLPVQPAYWQPTWTDAPALDPRLEPVLTRVNLLVDNGLTASMVAADYLHRRIAPLSRQDNLPVSVVEIMVAVRLRIGFGAMFDLPAVVLPLCADPNLETIQSTLPVLGATDE |
Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
Leaf | Root | Panicle | |
FPKM | 0 | 0 | 0 |
Homologues
Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
---|---|---|---|---|---|
Leaf | Root | Panicle | |||
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
Nipponbare | IRGSP 1.0 | MSU | LOC_Os04g27440 | RBH | 0.0 | 0.0 | 0.0 |
Nipponbare | IRGSP 1.0 | RAP-db | NA | NA | NA | NA | NA |
Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_04g0008830 | RBH | 0.0 | 0.0 | 0.0 |
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_04g0009540 | RBH | 0.0 | 0.0 | 0.0 |
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_04g0009310 | RBH | 0.0 | 0.0 | 0.0 |
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_04g0008990 | RBH | 0.0 | 0.0 | None |
PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_04g0009150 | RBH | 0.0 | 0.0 | 0.0 |
Minghui 63 | MH63RS3 | HZAU | OsMH63_04G0256700 | RBH | 0 | 0 | 0 |
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_04g0008260 | RBH | 0.0 | 0.0 | 0.0 |
Zhenshan 97 | ZS97RS3 | HZAU | NA | NA | NA | NA | NA |
LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_04g0008700 | RBH | 0.0 | 0.0 | None |
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_04g0008480 | RBH | 0.0 | 0.0 | None |
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_04g0008530 | RBH | 0.0 | 0.0 | None |
LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_04g0008910 | RBH | 0.0 | 0.0 | 0.0 |
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_04g0009200 | RBH | 0.0 | 0.0 | None |
N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_04G008280 | RBH | 0.0 | 0.0 | 0.0 |
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_04g0008350 | RBH | 0.0 | 0.0 | 0.0 |