Basic Info

Gene ID OGI # | Score   Accession | Assembly | Annotation Location Links
OsZS97_04G0059600 OGI:04011550 | 16/16 Zhenshan 97 | ZS97RS3 | HZAU Chr04:3862389-3866987
Gene Symbol -
DNA seq

CATTCGTCATCCTTCGGCGGGTGCACAGCAAGACAGCGAGGCATCTTCCACCTGCACCTTTGTGACAACAACGACCGACAATGTCGTCGTCGAGCGCATCATGGTTTGCGGGTGGGCAAAGACAACATCTTTTTTTTCCTTCTGCGTTGTGTGGTGGTCATATCTCTCTTCTCTCCTCGAATTACTTTTACGGTGATCTCAAAAGGTTGCCAACAAATACGTTGCACGGGCTTTTTAGTACTATTATACAAACCGTATGATTCTAATTATGTGTCGGGTGTATTGGTTAAAAATTTTATTTTCTGTGGAAAGATTAATAAATTTTATTAGTCATTTAACATAAATAAAACTTGGTGATAAAAAATTATATAGAACATGTTGCAATATTCCATCTGTTGCTATCTGTTTTCTTAATTTAATTGTTTAAATTTTTTGAATGAGTAAGTACTGATTTTTATTCATATGGTACTCTCAGTATAGTTTTTGTCTTGACTTCATTCAGTAATTTAAAACTAATAATTAAGTACTGAGTATTGTTTGGCGCCTTGTTTATAGCTTTTGAATCATTTAATAATTTTGAATTTTGTATGTAACATATATGGAGTTGTATTTGGCTTGGAATCTCAAGTATAGTTCTTCCATGATGTCATAATTCTGTGACTGGTATTAATAAGTACTTGTACCCTGTCAAAAAAAAAGTACTGAGTTGTACTCCGCTTGGAGTTTCAATTATGCTTTTTCTTATGATTTAATAATTCAGAAATTTATAGTTAGTCATTGCCTATTTGTTATTGTATTGAAGTCATTGACATTATTCCGAAATTAGGAAATTAATTATTACAAAATTAATAATAAGGAATTTTAGAATTAACAAGTATCAAGCTATACTAAGTATATCCTTGATTTAATGATCCTTAAATTCAAATTGACAGGTACGGAGTAGTATTTGTGGTATTATATTTTGAATCTTGTATTTCTTCAAAATTGACTAACATGTATTTTTGTTTTATTTTAATCTGATTTAGCCGATATTTGCGTGTTTATTTTCTTCGGAATTTCAGTTACATGTATTATATTTTACTATATCATTCTAATTCTACCTCACAGCCAGTGGAAGGCCATATTATTTTTAGAATTTGTCCTAATTAATGTTAGAATTTCTTATAGGCCTAACTTTTTTAAAGATAATATACTTCCTCTGTCCTAGAATATTTCATTTCTACCATTAAGTTTTATCAAAAAAAATATTATATTTCTAATGAGGTGGGACCCAATAAATTAATTGGATGAAGATTGCATTGCCTCAACCTTTATTTTAATCAAGTTCTCTAATAAGATTATTGTGGTCATTTGTGTATGCTGCTAATCTGAGATTCAATTATTCTCTAACTCCATACTTTTTAGCAAATGATACTAGGAAAAACAACTCCGCCAAAATGTGGTCGAGTAATTAACTAATAACCTACTCTGTCCCATAATTCTTGACATTTTGAATAATAACACGGTCTCCAAAATATATATTTTACTATGTTTTTCTATTATAATATATACAATAAATTAATAAAGTTAGTTTATTTTTATTGTAGTACATTGTAAGACAAATTTATATATGTTGTTTTAATACCTTTAAACTAAATAGCTTTAAAGTTATTGATAGTCAAAGTTATAAAAGTTTGATTTTAACCTTGTTCTAAACGTCAAGAAATATGGAACCGGAGGGAATACCATTTTCGCATGTGCCCGCTCTCGACTAATCTCGGTATATTACGTACTCGTACAGTGATATTAGTATATTAAAAGAAACTCCTTGCTCTTTGTCTTACATTGCAACTAATTATGCTACTAAATTTTTCAAGTAAAAACGTAGTGCAAGATAATGTGATGAATAACCAACAATCTTGTATTCAATCAAGCTGTATAAAAGGGAAATTTGTAAATGGAGATGTTTACCTGAGAAAAACATAATTGCTGCTTCGTCCATCATGGGTGAACGTCTGAGATTATATGCAAATGCGAACATGACACCACGGCATGGCTGCTTAGTTGCTTTCAATAGCAATTCCGAATATTCATATGGGTACAGCCGTACATGAGCGTTCAATCCAAATATTACGTATGGTTATATACCTTTGAATTCTGTTCCACGCATGCCAATTTAATTTCTGTGGAAAAGATTCTTACAATATCTATAGACACCGGTATGATTAGACTTACCATCATGATGATACGGTCCACATAACCAATAACTAGATGTTTCTGATTAATATATATGGAGCTCGTAGAAAGTGTCAAATTAGTATAGGTATAGTTATACTGATAGATTCTACTAGCAGTATTAGCCAGTACAAATGGCCTCAATGGTTGATTTATTAGTTTTATTACCAGTAGTTATTTATGATGATAGTATAAATACATATGATCTATTCGCGATTCTAATGCCCCTCTAAAACATATGCGCAGAGATCTTCACAGATGACAGGGTGAGGACCCTATCACACCAAGTCTCCACACTTGGGGACAGGGTGTGGGAGTTGGAGCACAAAAACACCAGGCTGCTTGGCGAGAAGGGTAAACTGGAGAAGCAATTGGAGGAGACGAAGGCGGTGGTTCAGGCCATCTCAAGCGAGAAGGAAGAGGTGGAGAGGAGCTTGAAGGGTGAAAATGATAAGCTTCGGTTGGAGGTTTTGACCGCGGAGGAAAAATATAGCCAGTCTGCAGCAGAGGTTGAGAAGCTTCAGAAGGAATTAGTTGCATTGGCAGAGGTGAAAGAGGTAGCTGCAAAGGCATTTGATGATGAGAAAGCAAAAATGATGATGGAATCTGTGGATCTTAAGAGTAGGCTAGAGGAAATCCAGGGTAACATGGATATGATTAAGAGTGAAAATGATAAGCTTCGGTCAGAAGCTTTGGTTGCAGAGCAGAAACTAAACATATGTGAAGCAGAGATTGAGAGGCTTAAGATGGAATTGGGTGCATTGACAGAAGCGAACGAAGCAGCTGCGAAAGCATTTGACACTCAAAATGAAGAAATCACGAAGGAGCTAGAGGATCTTAAGACAAAGTTGGAGGAAATCAAAACAAATAAGGATCTAGCGGAAAGTGAAAATGGTAAGCTTCGGTCGGAGCTTTTGTCAGCAGAGGAGAAATATAGCCAGTCTGAAGCAGAGGTTAAGTATCTTAAGCAGGTAATGGGAGCAGTGGTGGAGGCGAAGGAGGCAGCTGCAAAGGCATTTGCTGCCGAGAAGGAAGACATCATGAAAGAATCAGACAATCTTAAGAGGAAAGTTAAGGAAATTCAGGATAGCAAGCTTTTGGTGGAGAGTGAAAATGATGAGCTTCGGTCAGAGATTTTAAGTATGAAGCAGAAACATGGTCAATTTGAAGTAGAGGTTACTAGCCTCAAGAAGGAGCTGGGAGCACTAGAGGAGGCAAAGGAGATCACCACAAAGGCATTTGAGGTTGAGAAGACAGAAATCCTAAAGGAATTGGAGGATCTTAAGAGGAAGGTGGTGGAAATCCAAACCAACAAGGATTTAGTGGAGGTAGAGAATGATAAACTTCGGTTGGATGTTTTATCTGCACAACAGAAACAAAGCATATTAGAAGTAGAGGCTAACAATCTCAAGATGGAATTGGGTGCATTGGTGGAGGCAAAGGAGGTGGCTACGAAGGCATTCGACGCTGAGAAAGCAAAAATAACGAAGGAATTGGAGGATGTTAAGAGGAAGATGGAGGAAATCCAGGTCAAGAAGGATTTGGTGGAGGGTGAAAAGGATAAGCTTCGGTTGGAGATATTAATAGCGGAGCAGAAACATAGCATGTCTGAATTGGAGGTTAAAAGGCTCAAGATGGAACTTGGTGCATTGGCAGAGGCAAATGAGACAGCTGTGAAGTCATTTGATGCTGAGAAGGAAAAATTCATCAGGGAAATGGGGGACCTCAAGAGGAAGATAGAGGAAATCCAGGTCAGCAAGGAAGCTGCTGAGGAAGTAGGGCGCAACAAGAATGCAGAGGCTGATAGGCTGAGGGCTGAGTTGGTGAAGATCCAAGTTTCTTTATCGCAACTACAAGCATCCTATAATGAACTTGATGCTAAGCATTCTCTCCTAAATGATGAGAAGAATTCAGCCCAGAAAGCATTAGATGTTGAGAAGGTTGAAGCATGTAAGCTGAAGTCAAAATTTAAGGAACTTGAAAATTATAAGGCTGAAAAGGATGAAGAGGCTGGGAAACTGAAGGCGGCATTGGAGGAAAAGAAAAGTGAGATTGATGTCCTCATCAAGGACAATGAGTTGCTGCGTCTCGCAATTGCTGAGGCACAGGAAAAGAATAAGGGAAGCATTTTATCATGCTTATCACCATGCGGCTCCAAATAATTAGGTCGGGAATGTGTTGCATTAATAATGTAATGGTGATCAGTTAATACTATGCAATGAAATAAAACTTTCACTTCCTTTGTTATATATGATATGCTAGAATGCTAATGTTCTTGATTAGTCAGGTACATTTTGTGATGTCTCTAAACTGAGTATTTTGGTAAACCTGTCACCTTAACTATTACTCCCTTTGTCCCAATTTAGAGGGCATGTAAATTTTTTG

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CDS seq

ATGTCGTCGTCGAGCGCATCATGGTTTGCGGAGATCTTCACAGATGACAGGGTGAGGACCCTATCACACCAAGTCTCCACACTTGGGGACAGGGTGTGGGAGTTGGAGCACAAAAACACCAGGCTGCTTGGCGAGAAGGGTAAACTGGAGAAGCAATTGGAGGAGACGAAGGCGGTGGTTCAGGCCATCTCAAGCGAGAAGGAAGAGGTGGAGAGGAGCTTGAAGGGTGAAAATGATAAGCTTCGGTTGGAGGTTTTGACCGCGGAGGAAAAATATAGCCAGTCTGCAGCAGAGGTTGAGAAGCTTCAGAAGGAATTAGTTGCATTGGCAGAGGTGAAAGAGGTAGCTGCAAAGGCATTTGATGATGAGAAAGCAAAAATGATGATGGAATCTGTGGATCTTAAGAGTAGGCTAGAGGAAATCCAGGGTAACATGGATATGATTAAGAGTGAAAATGATAAGCTTCGGTCAGAAGCTTTGGTTGCAGAGCAGAAACTAAACATATGTGAAGCAGAGATTGAGAGGCTTAAGATGGAATTGGGTGCATTGACAGAAGCGAACGAAGCAGCTGCGAAAGCATTTGACACTCAAAATGAAGAAATCACGAAGGAGCTAGAGGATCTTAAGACAAAGTTGGAGGAAATCAAAACAAATAAGGATCTAGCGGAAAGTGAAAATGGTAAGCTTCGGTCGGAGCTTTTGTCAGCAGAGGAGAAATATAGCCAGTCTGAAGCAGAGGTTAAGTATCTTAAGCAGGTAATGGGAGCAGTGGTGGAGGCGAAGGAGGCAGCTGCAAAGGCATTTGCTGCCGAGAAGGAAGACATCATGAAAGAATCAGACAATCTTAAGAGGAAAGTTAAGGAAATTCAGGATAGCAAGCTTTTGGTGGAGAGTGAAAATGATGAGCTTCGGTCAGAGATTTTAAGTATGAAGCAGAAACATGGTCAATTTGAAGTAGAGGTTACTAGCCTCAAGAAGGAGCTGGGAGCACTAGAGGAGGCAAAGGAGATCACCACAAAGGCATTTGAGGTTGAGAAGACAGAAATCCTAAAGGAATTGGAGGATCTTAAGAGGAAGGTGGTGGAAATCCAAACCAACAAGGATTTAGTGGAGGTAGAGAATGATAAACTTCGGTTGGATGTTTTATCTGCACAACAGAAACAAAGCATATTAGAAGTAGAGGCTAACAATCTCAAGATGGAATTGGGTGCATTGGTGGAGGCAAAGGAGGTGGCTACGAAGGCATTCGACGCTGAGAAAGCAAAAATAACGAAGGAATTGGAGGATGTTAAGAGGAAGATGGAGGAAATCCAGGTCAAGAAGGATTTGGTGGAGGGTGAAAAGGATAAGCTTCGGTTGGAGATATTAATAGCGGAGCAGAAACATAGCATGTCTGAATTGGAGGTTAAAAGGCTCAAGATGGAACTTGGTGCATTGGCAGAGGCAAATGAGACAGCTGTGAAGTCATTTGATGCTGAGAAGGAAAAATTCATCAGGGAAATGGGGGACCTCAAGAGGAAGATAGAGGAAATCCAGGTCAGCAAGGAAGCTGCTGAGGAAGTAGGGCGCAACAAGAATGCAGAGGCTGATAGGCTGAGGGCTGAGTTGGTGAAGATCCAAGTTTCTTTATCGCAACTACAAGCATCCTATAATGAACTTGATGCTAAGCATTCTCTCCTAAATGATGAGAAGAATTCAGCCCAGAAAGCATTAGATGTTGAGAAGGTTGAAGCATGTAAGCTGAAGTCAAAATTTAAGGAACTTGAAAATTATAAGGCTGAAAAGGATGAAGAGGCTGGGAAACTGAAGGCGGCATTGGAGGAAAAGAAAAGTGAGATTGATGTCCTCATCAAGGACAATGAGTTGCTGCGTCTCGCAATTGCTGAGGCACAGGAAAAGAATAAGGGAAGCATTTTATCATGCTTATCACCATGCGGCTCCAAATAA

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Protein seq

MSSSSASWFAEIFTDDRVRTLSHQVSTLGDRVWELEHKNTRLLGEKGKLEKQLEETKAVVQAISSEKEEVERSLKGENDKLRLEVLTAEEKYSQSAAEVEKLQKELVALAEVKEVAAKAFDDEKAKMMMESVDLKSRLEEIQGNMDMIKSENDKLRSEALVAEQKLNICEAEIERLKMELGALTEANEAAAKAFDTQNEEITKELEDLKTKLEEIKTNKDLAESENGKLRSELLSAEEKYSQSEAEVKYLKQVMGAVVEAKEAAAKAFAAEKEDIMKESDNLKRKVKEIQDSKLLVESENDELRSEILSMKQKHGQFEVEVTSLKKELGALEEAKEITTKAFEVEKTEILKELEDLKRKVVEIQTNKDLVEVENDKLRLDVLSAQQKQSILEVEANNLKMELGALVEAKEVATKAFDAEKAKITKELEDVKRKMEEIQVKKDLVEGEKDKLRLEILIAEQKHSMSELEVKRLKMELGALAEANETAVKSFDAEKEKFIREMGDLKRKIEEIQVSKEAAEEVGRNKNAEADRLRAELVKIQVSLSQLQASYNELDAKHSLLNDEKNSAQKALDVEKVEACKLKSKFKELENYKAEKDEEAGKLKAALEEKKSEIDVLIKDNELLRLAIAEAQEKNKGSILSCLSPCGSK

Function -

Transcripts

Gene Transcript Chromosome Start End Strand Source
OsZS97_04G0059600 OsZS97_04T0059600.1 Chr04 3862389 3866987 + makerRMon
CDS seq

ATGTCGTCGTCGAGCGCATCATGGTTTGCGGAGATCTTCACAGATGACAGGGTGAGGACCCTATCACACCAAGTCTCCACACTTGGGGACAGGGTGTGGGAGTTGGAGCACAAAAACACCAGGCTGCTTGGCGAGAAGGGTAAACTGGAGAAGCAATTGGAGGAGACGAAGGCGGTGGTTCAGGCCATCTCAAGCGAGAAGGAAGAGGTGGAGAGGAGCTTGAAGGGTGAAAATGATAAGCTTCGGTTGGAGGTTTTGACCGCGGAGGAAAAATATAGCCAGTCTGCAGCAGAGGTTGAGAAGCTTCAGAAGGAATTAGTTGCATTGGCAGAGGTGAAAGAGGTAGCTGCAAAGGCATTTGATGATGAGAAAGCAAAAATGATGATGGAATCTGTGGATCTTAAGAGTAGGCTAGAGGAAATCCAGGGTAACATGGATATGATTAAGAGTGAAAATGATAAGCTTCGGTCAGAAGCTTTGGTTGCAGAGCAGAAACTAAACATATGTGAAGCAGAGATTGAGAGGCTTAAGATGGAATTGGGTGCATTGACAGAAGCGAACGAAGCAGCTGCGAAAGCATTTGACACTCAAAATGAAGAAATCACGAAGGAGCTAGAGGATCTTAAGACAAAGTTGGAGGAAATCAAAACAAATAAGGATCTAGCGGAAAGTGAAAATGGTAAGCTTCGGTCGGAGCTTTTGTCAGCAGAGGAGAAATATAGCCAGTCTGAAGCAGAGGTTAAGTATCTTAAGCAGGTAATGGGAGCAGTGGTGGAGGCGAAGGAGGCAGCTGCAAAGGCATTTGCTGCCGAGAAGGAAGACATCATGAAAGAATCAGACAATCTTAAGAGGAAAGTTAAGGAAATTCAGGATAGCAAGCTTTTGGTGGAGAGTGAAAATGATGAGCTTCGGTCAGAGATTTTAAGTATGAAGCAGAAACATGGTCAATTTGAAGTAGAGGTTACTAGCCTCAAGAAGGAGCTGGGAGCACTAGAGGAGGCAAAGGAGATCACCACAAAGGCATTTGAGGTTGAGAAGACAGAAATCCTAAAGGAATTGGAGGATCTTAAGAGGAAGGTGGTGGAAATCCAAACCAACAAGGATTTAGTGGAGGTAGAGAATGATAAACTTCGGTTGGATGTTTTATCTGCACAACAGAAACAAAGCATATTAGAAGTAGAGGCTAACAATCTCAAGATGGAATTGGGTGCATTGGTGGAGGCAAAGGAGGTGGCTACGAAGGCATTCGACGCTGAGAAAGCAAAAATAACGAAGGAATTGGAGGATGTTAAGAGGAAGATGGAGGAAATCCAGGTCAAGAAGGATTTGGTGGAGGGTGAAAAGGATAAGCTTCGGTTGGAGATATTAATAGCGGAGCAGAAACATAGCATGTCTGAATTGGAGGTTAAAAGGCTCAAGATGGAACTTGGTGCATTGGCAGAGGCAAATGAGACAGCTGTGAAGTCATTTGATGCTGAGAAGGAAAAATTCATCAGGGAAATGGGGGACCTCAAGAGGAAGATAGAGGAAATCCAGGTCAGCAAGGAAGCTGCTGAGGAAGTAGGGCGCAACAAGAATGCAGAGGCTGATAGGCTGAGGGCTGAGTTGGTGAAGATCCAAGTTTCTTTATCGCAACTACAAGCATCCTATAATGAACTTGATGCTAAGCATTCTCTCCTAAATGATGAGAAGAATTCAGCCCAGAAAGCATTAGATGTTGAGAAGGTTGAAGCATGTAAGCTGAAGTCAAAATTTAAGGAACTTGAAAATTATAAGGCTGAAAAGGATGAAGAGGCTGGGAAACTGAAGGCGGCATTGGAGGAAAAGAAAAGTGAGATTGATGTCCTCATCAAGGACAATGAGTTGCTGCGTCTCGCAATTGCTGAGGCACAGGAAAAGAATAAGGGAAGCATTTTATCATGCTTATCACCATGCGGCTCCAAATAA

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Protein seq

MSSSSASWFAEIFTDDRVRTLSHQVSTLGDRVWELEHKNTRLLGEKGKLEKQLEETKAVVQAISSEKEEVERSLKGENDKLRLEVLTAEEKYSQSAAEVEKLQKELVALAEVKEVAAKAFDDEKAKMMMESVDLKSRLEEIQGNMDMIKSENDKLRSEALVAEQKLNICEAEIERLKMELGALTEANEAAAKAFDTQNEEITKELEDLKTKLEEIKTNKDLAESENGKLRSELLSAEEKYSQSEAEVKYLKQVMGAVVEAKEAAAKAFAAEKEDIMKESDNLKRKVKEIQDSKLLVESENDELRSEILSMKQKHGQFEVEVTSLKKELGALEEAKEITTKAFEVEKTEILKELEDLKRKVVEIQTNKDLVEVENDKLRLDVLSAQQKQSILEVEANNLKMELGALVEAKEVATKAFDAEKAKITKELEDVKRKMEEIQVKKDLVEGEKDKLRLEILIAEQKHSMSELEVKRLKMELGALAEANETAVKSFDAEKEKFIREMGDLKRKIEEIQVSKEAAEEVGRNKNAEADRLRAELVKIQVSLSQLQASYNELDAKHSLLNDEKNSAQKALDVEKVEACKLKSKFKELENYKAEKDEEAGKLKAALEEKKSEIDVLIKDNELLRLAIAEAQEKNKGSILSCLSPCGSK

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Event Type Chromosome Start End Strand Alternative mRNAs Total mRNAs Source

Expression

Leaf Root Panicle
FPKM 0.2819125 3.556173 0.0273425

Homologues

Genome & Annotation Homologs Type Expression(FPKM)
Leaf Root Panicle
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) OsNip_04g0155200 SBH 0.0 0.0 0.0
Nipponbare | IRGSP 1.0 | MSU LOC_Os04g07280 SBH 1.193407 0.477181 0.336403
Nipponbare | IRGSP 1.0 | RAP-db Os04g0155200 SBH None None None
Azucena | AzucenaRS1 | Gramene(+IsoSeq) OsAzu_04g0001950 SBH 0.0 0.0 0.0
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) OsKeNa_04g0002440 SBH 0.108136 0.551527 0.382590
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) OsCMeo_04g0002150 SBH 0.677213 4.254839 2.550593
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) OsARC_04g0002310 SBH 0.058668 0.0 None
PR 106 | Os127742RS1 | Gramene(+IsoSeq) OsPr106_04g0002200 RBH 3.562133 4.792177 8.721021
Minghui 63 | MH63RS3 | HZAU OsMH63_04G0054900 SBH 0.3956885 1.5440075 0.1638735
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) OsIR64_04g0002340 SBH 1.290577 0.354366 2.126323
Zhenshan 97 | ZS97RS3 | HZAU OsZS97_04G0063400 SBH 1.2810975 5.9950465 0.1335795
LIMA | Os127564RS1 | Gramene(+IsoSeq) OsLima_04g0002220 SBH 0.051991 0.084238 None
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) OsKYG_04g0002460 SBH 0.095330 2.168955 None
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) OsGoSa_04g0002220 SBH 2.694831 0.000000 None
LIU XU | Os125827RS1 | Gramene(+IsoSeq) OsLiXu_04g0002140 SBH 0.048971 0.223775 0.0
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) OsLaMu_04g0002190 SBH 0.0 0.433495 None
N22 | OsN22RS2 | Gramene(+IsoSeq) OsN22_04G002340 RBH 0.0 0.0 0.306953
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) OsNaBo_04g0002240 SBH 0.084174 4.018119 0.130735
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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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