Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsZS97_03G0487200 | OGI:03079710 | 15/16 | Zhenshan 97 | ZS97RS3 | HZAU | Chr03:30980993-30986439 | ||||||||
| Gene Symbol | OsSERL8, OsBAK1-6, SERL8, BAK1-6, TMS10L | ||||||||||
| DNA seq | TATGATGGTAGAAAATGTGGCTCGGCTTCGCCAAGCAGATGCGACTTGGGACTTCTGAAGTCTGAACTCTGAACACATGCGTCTCTAGCTGTTTTCCTCTACACAAATGGAGGCTTGACATGGGTTCTTTAGTGACATAACCAACCCTATGGTAACTAAGAGCCAACCATACATATACATACATGTATATCTATCAACACTGGGATTGGGAAGTGCCATGCATCAGGACGTACGCAGTCGTCATCTGCCGGCGGAGAGCTCGATGGCTTCCTGGTTGAAGATGGAGTCCTCGCCCCAGTCGAAGCGCTGCTGCATCCGCTCGTAGTCCTGCCGCCGCGTCACCTCCACCTGCTGCCACTCCTCCCACCGCTCCGCGAGTCCTTCCCCTTCCAGCATCCGCACCACCTCCGACATGGACGGCCGGTCCTCCGGCGACGCCTGGGTGCACAGCAGCGCGATCTGTATCATCATCTCCACCTCCTGCCCGTCGTAGTTGCTGCTCAGGTTCCGGTCCACGATGGCGCCCAGCTGCCCTTCCCTCTGCAGCTTCTTCACCTGCACATTTTCAGCAGCAACCAGCAAGCATGATCATGACACTGATGATTCAAGCGGTGCAGGCTTCAGAATGAATATGATGTTCAATGAGAGCAACAATTATTTTGTTTTTTTTTCTTTTCCTGCTGATTATAGCCTCTCATGCTGTATTTTTATAATTTTTCTTGCTATATCAGTATGAAATTTCGCACTATCTGGCACAGTTAGTTTCAAAAAAAATTCGTTCAATTATGTCAACACATGGCTATCAGAGGCTAGGATAATTTTGTTCCAGCTTCGCAAGAGTAGACTCACATGGTCAAGCAGTAGCACATCGTCTTCTTCCTCCAACCGTGAGAAGTCGATGGCGCGTTGTCCAGTGACCAGCTCAAGAAGCATTATGCCATAACCAAAAACATCAGTTCTCTCCGATGACTTCCCTGTGGACAGATATTCAGGCGCAATGTGACCCATAGTTCCACGGACTTGAGTTGTCACTGATGTCTTCTGTACATCAACCAACTTTGCCAGGCCAAAGTCACCAACAACTGGCTCAAAATCCTCATCAAGCAGGACGTTGGCAGCCTTGACATCTCGATGTATGATCTTGGGATTACAGTGCTCGTGCAGGTACTCCAGTCCACGTGCTGTGCCTATTGCCACACGTTTCCTTGCTGACCAATCCAATATTGGTTCGCCAGGTTTGAATTCTGCATCGTTAAACACGATGAGGTACATATTGAAATCTTCCAATATTGAATCTAAACATAAGAAAGTGAGCATATGCGATGTTGAAATCAATAGTGCACATGCACCATATTACCCAACAAGCGTAAATTAAAAGCACTACAAGTATCAGTTGCATAATCCATAGGCACAATAGTGAAGTATCCGAGAAACTTTATAGTACAGTAGTAGAAGCATAAAATTGGAAGAACGAAACAAATTATTGATCAGTTATAGAAAGTACCTCGTAAACGATAGGCCACACTAAGATTCTGCATGAAAGGATAAACAAGTAGACGTTCTGTTTGTGTTGTACAGAAGCCAATCAATCTTAAAAGATTCCGGTGAACTGCAACACTGATAAGCTCTACTTCACGCAAGAATGCAGCCTCCCCACCAGGGCTTTCATAATCTGTCAACCGCTTTACAGCAATCTTAGTGCCATCTGGAAGTGCTCCTTTATACACTTTACCGAAACCCCCCTGTCCAAGGACATTTTTCTCACTGAAACTATCGGTTGCAAGTTGTAATTCTCGCCAGGCAAATCTTTTCAACTGACCAAATGCAATTCTTCGATCGTCCTCGCCTGGGGACATAAGTTACAGATTAGTTAACTAAAATTACTCTTGACTAAATGTAAATGCAGCCTATGCATATCCTAATCCTAAATTTGTAAATTGAAACGCTGCTTTAGAAACAACCTTCCATATCTTTTATCAGAAAATTACTGAAGGTGCTAAACACTTGACAGCTTTGCATATTGCATGCTACTTTTTTTTTCTCATTTTGCCATAAATTTTTTTGACCAAAATACTTCACCAAGATTATTTATTAAACATGGAGCAGTAAGCGAAACTGCCAGTAAAAATAGCTGTGTTGACATACACAACCTGGAAACCATAGTTTAGAAATAAACCAACATGTGTGAGTTATCTCTGCTTGCACTGTTTTTGTTTTGGGGGTCGCATGATAAAATTTTGCGGCATAATTTACATCTTTGTTTCAATAAAATAATAAACAAGACTGTAGGAAAAGGTTTAGTTGAATGAATGGATAGAAAGAAAATCATGAAGTAAAATACTACCTGATACATCGACAAAAACTTCTCGTAGATGGCTTTTCCTCCTTCCATTACAGACAATAAACACAGCCCCTATTATAAGTATCCCTATTGCTCCTACAACTGTTCCGAGTACAATGCCTACCTTTGAGCCATGGGATGAACCTATTAAACAGATAGAATTAGCATATTCCAGCGAAAATTCTGACAGGCATCCAATGGATGCTGTATGACAGATGTGCAATGTTGAACAGGGAAAAAATTGCTTCCTACCTTGATAAGAAATACTTGATGAGCATGGATGCAGAAAGTTTGCTCCACAAGTCAAGTTATTACCAGAAAAGCTGTAAAGAAAATTAACATTTGTCAGAACTCAAAGCTCAAACTTGAAAAAACATGAGTATACAAGTCACAGTGATCCAACAGTACTTGTAACGTGCAACTTGAAACAGTGAACCAGGTATTGAACCAGAGAGTTTATTGTAGGCTAACCTACTGCAATCATAAGAAAAAAAATATGTTAGTCAAATAATTCAGGCATGGACTGTTGTCAACAGAAATCATGTATGAGTCCTTGCATGTCTGTCAAGCTTGAGATTCTTGCTACAGTATCAGGTATAGTTCCGTTGAGATTGTTTTGACTTAGTATCCTGTTTAAGAGATAAAAAGGTGAGCAGGTTAAATCATTATACATTCATAAAACAAAGGAGTAAGGTTCAAGTACATACAGAATTTGGAGCTTTGAAAGCTGGCCAAGAGAAGCCGGTATTGGTCCAACCAACAAATTGTCTTCCAAATCCAAACTTGTCAAACTAGATAGGTTGCCGATCTGCTCAGGTATGCCACCAGTAATCTTATTACCAGGCAAGGACCTGCAATGACATGCACTACAGTGGTTAGCAAAAACTGGAGTCTAAGACCACAGTACATGGTAACTAAGACAACCAAATCTTTGGGCAGCAAGCACAGAAATAGCTAACAGTTGGCACTTCTCACATAATACCAGCTTCTGGTTTCCTCTAGGATCACAGTAGCTATTTCATCACAACTACCACCAAATATCTGAGAGAAATTCCAACAATCAACACAAGTACACTTACAAAACATTCAAAAACTGAAGCTCTCCAATTCGTGGTGATAGAACTCCAGTGAATCCCATAGATGCCAATGTTCTGCAGGAGGGCATCTGTCATCAGGCACACCAACTTGGAACAAACAAAAAACCTAGATATGGAACATGCATAACGGGGCCAACAGAATCATCTAGATGTTGTTTTGCCAGAAATAACAGATGGTGTGAAGAAGATTTAAAGAAACAGCATGTTGTATGATTTTTCCATTTTCATATAGTTCAATTATGAAATGTGCTCGTGCATCAAAGAAGTGCAGATAGCATGTGCAAGTGCATCAAAAAAATCATAATCATGTGCTCAAACAGATGCTTCTGGAGCTCACTGGTAATGAATGTGGAACATAAATCAAGAACTATTATGCCATATAAGTTTAAGAGATACGTAAATATAGAATTAACTCAAAATGGAGAGAAAATAAAAGTGAAGCAAAACATCAACAAAATAAACTTACACTTGCACAACATTGTAGTTGTTGTCACAAATAACAGAATTCCAAGTGCATGGGTTAACTTGATTTTGGTTCCAGTCAGAAAGCTGGTTACCAGTAGCATTCAGCTTCAGCTTCATATCATATAGTGCATCACCTAAGGAAATAAAAGAAATTTATTTATTACCCAAAAGTATTTGCAAACTCATGATTGTGGAAGCACTCCAAAATAGCTGAATAACTACATAAATGATAGGCATGTAAATAAACCTTGACGGTCAGATGCTGAAAATGGGAGCAGAGATGCTATAATTAGGAGGACGCTGAGCAGATCCATGACTCTTCAGTTATAATTACAGCATCAAAAGAGTTCCTTGGGGAAACTTGCCCGGCGAAAAAAAGTACACGAACTGATCATAGTAGTATAATACCGGAGTCCCTGGCTAACCCAGTTAACAAGCAAGCCAGTCCAGTATGGCACCTATAAGATAGACAAAATATTATTGGATAAGAAAAGAGGTTCATACAAGATTGAGTGATAGGCAAAGCAGAATTTGTAGTTACTGTTATTATTATACTATCTGTTCACTGTTATGCTGTTAGTTATGCTGAAAAGCAAAAGTTGCCTTGAAATGCACAATTGTTTCATCGGTATACTAAAATAGAGGCTTGAATTCATCACAGCAAAACGTACTAGAATTATTATTTCCAAAGAGAACGCATGAAACAAGCAAAACTTCCGTTCAAAAAAAAGGAAGCAAAACCAAGCTCCCAATTATGCCCCCAAACCAAAAGGTCGCCATGGTTAAAAATATCTAAATTTGCCTAACAAATCAAAATATCTGAACATGCCCATACAGCACATAAACCTTCTAATTTTTAGTATGTCAGCACCACTAAATTCTCTTGCTATTAAAAAAAAGGAATATTAGCAAGACTCAGATATTCTAGAAGCTATCATGAAGAACTACATCCATTCAAAAAAAAATCATGAAGAACTACAGACCTGATAGAATTAACCAAAACGTTCCCAGAAGCAGCACAACTGTGATCCAGTGATCCCTCCCAGTGAGAGACGGCACCAAAATTAAACCCACAATTCGAATTGAACAAACTCTTTAAACACCAGAGAGAATCAGAGATTCAGCCTCTCCAAATCTGATCCTTCTCTTACTGCTTACCTCCAGCACTTCCAAATTCCAATTCACACACACACAGACAGTGAAGACTGAAGAGAGAAGCACGTACTACCTACCAGTGGCTCGCCCTCGCAGGCTGGGCAGCAAGCAGGTCGTCGCAGGTCCACGCCGCCTCTCCCACTTCACCTCCTCACCCCGCCGCCGCCGCCGCCGCCGCTGGCGCGCGGGTAAAAGGCGTGGGTGGGGCGCTGCGCTGGAGCAGTTGACTCGAGGAAGCAGCAGGAATTGACCGGTGCTGCCGGGGCGGAGCGCGTGCGGCCATTTTTTTTAGGCGCGACGCAACTTGGTTGGTTAGGTGGATCCCCCTCCTTTTTACCTCCCCATCTCTGGATAAGACGGAATTCGGCGACCTTCTCCTCCGGATCGCA
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| CDS seq | ATGGATCTGCTCAGCGTCCTCCTAATTATAGCATCTCTGCTCCCATTTTCAGCATCTGACCGTCAAGGTGATGCACTATATGATATGAAGCTGAAGCTGAATGCTACTGGTAACCAGCTTTCTGACTGGAACCAAAATCAAGTTAACCCATGCACTTGGAATTCTGTTATTTGTGACAACAACTACAATGTTGTGCAAGTAACATTGGCATCTATGGGATTCACTGGAGTTCTATCACCACGAATTGGAGAGCTTCAGTTTTTGAATGTTTTGTCCTTGCCTGGTAATAAGATTACTGGTGGCATACCTGAGCAGATCGGCAACCTATCTAGTTTGACAAGTTTGGATTTGGAAGACAATTTGTTGGTTGGACCAATACCGGCTTCTCTTGGCCAGCTTTCAAAGCTCCAAATTCTGATACTAAGTCAAAACAATCTCAACGGAACTATACCTGATACTGTAGCAAGAATCTCAAGCTTGACAGACATTAGGTTAGCCTACAATAAACTCTCTGGTTCAATACCTGGTTCACTGTTTCAAGTTGCACGTTACAACTTTTCTGGTAATAACTTGACTTGTGGAGCAAACTTTCTGCATCCATGCTCATCAAGTATTTCTTATCAAGGTTCATCCCATGGCTCAAAGGTAGGCATTGTACTCGGAACAGTTGTAGGAGCAATAGGGATACTTATAATAGGGGCTGTGTTTATTGTCTGTAATGGAAGGAGGAAAAGCCATCTACGAGAAGTTTTTGTCGATGTATCAGGCGAGGACGATCGAAGAATTGCATTTGGTCAGTTGAAAAGATTTGCCTGGCGAGAATTACAACTTGCAACCGATAGTTTCAGTGAGAAAAATGTCCTTGGACAGGGGGGTTTCGGTAAAGTGTATAAAGGAGCACTTCCAGATGGCACTAAGATTGCTGTAAAGCGGTTGACAGATTATGAAAGCCCTGGTGGGGAGGCTGCATTCTTGCGTGAAGTAGAGCTTATCAGTGTTGCAGTTCACCGGAATCTTTTAAGATTGATTGGCTTCTGTACAACACAAACAGAACGTCTACTTGTTTATCCTTTCATGCAGAATCTTAGTGTGGCCTATCGTTTACGAGAATTCAAACCTGGCGAACCAATATTGGATTGGTCAGCAAGGAAACGTGTGGCAATAGGCACAGCACGTGGACTGGAGTACCTGCACGAGCACTGTAATCCCAAGATCATACATCGAGATGTCAAGGCTGCCAACGTCCTGCTTGATGAGGATTTTGAGCCAGTTGTTGGTGACTTTGGCCTGGCAAAGTTGGTTGATGTACAGAAGACATCAGTGACAACTCAAGTCCGTGGAACTATGGGTCACATTGCGCCTGAATATCTGTCCACAGGGAAGTCATCGGAGAGAACTGATGTTTTTGGTTATGGCATAATGCTTCTTGAGCTGGTCACTGGACAACGCGCCATCGACTTCTCACGGTTGGAGGAAGAAGACGATGTGCTACTGCTTGACCATGTGAAGAAGCTGCAGAGGGAAGGGCAGCTGGGCGCCATCGTGGACCGGAACCTGAGCAGCAACTACGACGGGCAGGAGGTGGAGATGATGATACAGATCGCGCTGCTGTGCACCCAGGCGTCGCCGGAGGACCGGCCGTCCATGTCGGAGGTGGTGCGGATGCTGGAAGGGGAAGGACTCGCGGAGCGGTGGGAGGAGTGGCAGCAGGTGGAGGTGACGCGGCGGCAGGACTACGAGCGGATGCAGCAGCGCTTCGACTGGGGCGAGGACTCCATCTTCAACCAGGAAGCCATCGAGCTCTCCGCCGGCAGATGA
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| Protein seq | MDLLSVLLIIASLLPFSASDRQGDALYDMKLKLNATGNQLSDWNQNQVNPCTWNSVICDNNYNVVQVTLASMGFTGVLSPRIGELQFLNVLSLPGNKITGGIPEQIGNLSSLTSLDLEDNLLVGPIPASLGQLSKLQILILSQNNLNGTIPDTVARISSLTDIRLAYNKLSGSIPGSLFQVARYNFSGNNLTCGANFLHPCSSSISYQGSSHGSKVGIVLGTVVGAIGILIIGAVFIVCNGRRKSHLREVFVDVSGEDDRRIAFGQLKRFAWRELQLATDSFSEKNVLGQGGFGKVYKGALPDGTKIAVKRLTDYESPGGEAAFLREVELISVAVHRNLLRLIGFCTTQTERLLVYPFMQNLSVAYRLREFKPGEPILDWSARKRVAIGTARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEPVVGDFGLAKLVDVQKTSVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLQREGQLGAIVDRNLSSNYDGQEVEMMIQIALLCTQASPEDRPSMSEVVRMLEGEGLAERWEEWQQVEVTRRQDYERMQQRFDWGEDSIFNQEAIELSAGR |
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| Function | LRR receptor kinase SERK2 [UniProtKB/Swiss-Prot:Q6K4T4] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsZS97_03G0487200 | OsZS97_03T0487200.1 | Chr03 | 30980993 | 30986439 | - | makerRMon | ||
| CDS seq | ATGGATCTGCTCAGCGTCCTCCTAATTATAGCATCTCTGCTCCCATTTTCAGCATCTGACCGTCAAGGTGATGCACTATATGATATGAAGCTGAAGCTGAATGCTACTGGTAACCAGCTTTCTGACTGGAACCAAAATCAAGTTAACCCATGCACTTGGAATTCTGTTATTTGTGACAACAACTACAATGTTGTGCAAGTAACATTGGCATCTATGGGATTCACTGGAGTTCTATCACCACGAATTGGAGAGCTTCAGTTTTTGAATGTTTTGTCCTTGCCTGGTAATAAGATTACTGGTGGCATACCTGAGCAGATCGGCAACCTATCTAGTTTGACAAGTTTGGATTTGGAAGACAATTTGTTGGTTGGACCAATACCGGCTTCTCTTGGCCAGCTTTCAAAGCTCCAAATTCTGATACTAAGTCAAAACAATCTCAACGGAACTATACCTGATACTGTAGCAAGAATCTCAAGCTTGACAGACATTAGGTTAGCCTACAATAAACTCTCTGGTTCAATACCTGGTTCACTGTTTCAAGTTGCACGTTACAACTTTTCTGGTAATAACTTGACTTGTGGAGCAAACTTTCTGCATCCATGCTCATCAAGTATTTCTTATCAAGGTTCATCCCATGGCTCAAAGGTAGGCATTGTACTCGGAACAGTTGTAGGAGCAATAGGGATACTTATAATAGGGGCTGTGTTTATTGTCTGTAATGGAAGGAGGAAAAGCCATCTACGAGAAGTTTTTGTCGATGTATCAGGCGAGGACGATCGAAGAATTGCATTTGGTCAGTTGAAAAGATTTGCCTGGCGAGAATTACAACTTGCAACCGATAGTTTCAGTGAGAAAAATGTCCTTGGACAGGGGGGTTTCGGTAAAGTGTATAAAGGAGCACTTCCAGATGGCACTAAGATTGCTGTAAAGCGGTTGACAGATTATGAAAGCCCTGGTGGGGAGGCTGCATTCTTGCGTGAAGTAGAGCTTATCAGTGTTGCAGTTCACCGGAATCTTTTAAGATTGATTGGCTTCTGTACAACACAAACAGAACGTCTACTTGTTTATCCTTTCATGCAGAATCTTAGTGTGGCCTATCGTTTACGAGAATTCAAACCTGGCGAACCAATATTGGATTGGTCAGCAAGGAAACGTGTGGCAATAGGCACAGCACGTGGACTGGAGTACCTGCACGAGCACTGTAATCCCAAGATCATACATCGAGATGTCAAGGCTGCCAACGTCCTGCTTGATGAGGATTTTGAGCCAGTTGTTGGTGACTTTGGCCTGGCAAAGTTGGTTGATGTACAGAAGACATCAGTGACAACTCAAGTCCGTGGAACTATGGGTCACATTGCGCCTGAATATCTGTCCACAGGGAAGTCATCGGAGAGAACTGATGTTTTTGGTTATGGCATAATGCTTCTTGAGCTGGTCACTGGACAACGCGCCATCGACTTCTCACGGTTGGAGGAAGAAGACGATGTGCTACTGCTTGACCATGTGAAGAAGCTGCAGAGGGAAGGGCAGCTGGGCGCCATCGTGGACCGGAACCTGAGCAGCAACTACGACGGGCAGGAGGTGGAGATGATGATACAGATCGCGCTGCTGTGCACCCAGGCGTCGCCGGAGGACCGGCCGTCCATGTCGGAGGTGGTGCGGATGCTGGAAGGGGAAGGACTCGCGGAGCGGTGGGAGGAGTGGCAGCAGGTGGAGGTGACGCGGCGGCAGGACTACGAGCGGATGCAGCAGCGCTTCGACTGGGGCGAGGACTCCATCTTCAACCAGGAAGCCATCGAGCTCTCCGCCGGCAGATGA
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| Protein seq | MDLLSVLLIIASLLPFSASDRQGDALYDMKLKLNATGNQLSDWNQNQVNPCTWNSVICDNNYNVVQVTLASMGFTGVLSPRIGELQFLNVLSLPGNKITGGIPEQIGNLSSLTSLDLEDNLLVGPIPASLGQLSKLQILILSQNNLNGTIPDTVARISSLTDIRLAYNKLSGSIPGSLFQVARYNFSGNNLTCGANFLHPCSSSISYQGSSHGSKVGIVLGTVVGAIGILIIGAVFIVCNGRRKSHLREVFVDVSGEDDRRIAFGQLKRFAWRELQLATDSFSEKNVLGQGGFGKVYKGALPDGTKIAVKRLTDYESPGGEAAFLREVELISVAVHRNLLRLIGFCTTQTERLLVYPFMQNLSVAYRLREFKPGEPILDWSARKRVAIGTARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEPVVGDFGLAKLVDVQKTSVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLQREGQLGAIVDRNLSSNYDGQEVEMMIQIALLCTQASPEDRPSMSEVVRMLEGEGLAERWEEWQQVEVTRRQDYERMQQRFDWGEDSIFNQEAIELSAGR
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsZS97_03G0487200 | OsZS97_03T0487200.2 | Chr03 | 30980993 | 30986356 | - | makerRMon | ||
| CDS seq | ATGGATCTGCTCAGCGTCCTCCTAATTATAGCATCTCTGCTCCCATTTTCAGCATCTGACCGTCAAGGTGATGCACTATATGATATGAAGCTGAAGCTGAATGCTACTGGTAACCAGCTTTCTGACTGGAACCAAAATCAAGTTAACCCATGCACTTGGAATTCTGTTATTTGTGACAACAACTACAATGTTGTGCAAGTAACATTGGCATCTATGGGATTCACTGGAGTTCTATCACCACGAATTGGAGAGCTTCAGTTTTTGAATGTTTTGTCCTTGCCTGGTAATAAGATTACTGGTGGCATACCTGAGCAGATCGGCAACCTATCTAGTTTGACAAGTTTGGATTTGGAAGACAATTTGTTGGTTGGACCAATACCGGCTTCTCTTGGCCAGCTTTCAAAGCTCCAAATTCTGATACTAAGTCAAAACAATCTCAACGGAACTATACCTGATACTGTAGCAAGAATCTCAAGCTTGACAGACATTAGGTTAGCCTACAATAAACTCTCTGGTTCAATACCTGGTTCACTGTTTCAAGTTGCACGTTACAACTTTTCTGGTAATAACTTGACTTGTGGAGCAAACTTTCTGCATCCATGCTCATCAAGTATTTCTTATCAAGGTTCATCCCATGGCTCAAAGGTAGGCATTGTACTCGGAACAGTTGTAGGAGCAATAGGGATACTTATAATAGGGGCTGTGTTTATTGTCTGTAATGGAAGGAGGAAAAGCCATCTACGAGAAGTTTTTGTCGATGTATCAGGCGAGGACGATCGAAGAATTGCATTTGGTCAGTTGAAAAGATTTGCCTGGCGAGAATTACAACTTGCAACCGATAGTTTCAGTGAGAAAAATGTCCTTGGACAGGGGGGTTTCGGTAAAGTGTATAAAGGAGCACTTCCAGATGGCACTAAGATTGCTGTAAAGCGGTTGACAGATTATGAAAGCCCTGGTGGGGAGGCTGCATTCTTGCGTGAAGTAGAGCTTATCAGTGTTGCAGTTCACCGGAATCTTTTAAGATTGATTGGCTTCTGTACAACACAAACAGAACGTCTACTTGTTTATCCTTTCATGCAGAATCTTAGTGTGGCCTATCGTTTACGAGAATTCAAACCTGGCGAACCAATATTGGATTGGTCAGCAAGGAAACGTGTGGCAATAGGCACAGCACGTGGACTGGAGTACCTGCACGAGCACTGTAATCCCAAGATCATACATCGAGATGTCAAGGCTGCCAACGTCCTGCTTGATGAGGATTTTGAGCCAGTTGTTGGTGACTTTGGCCTGGCAAAGTTGGTTGATGTACAGAAGACATCAGTGACAACTCAAGTCCGTGGAACTATGGGTCACATTGCGCCTGAATATCTGTCCACAGGGAAGTCATCGGAGAGAACTGATGTTTTTGGTTATGGCATAATGCTTCTTGAGCTGGTCACTGGACAACGCGCCATCGACTTCTCACGGTTGGAGGAAGAAGACGATGTGCTACTGCTTGACCATGTGAAGAAGCTGCAGAGGGAAGGGCAGCTGGGCGCCATCGTGGACCGGAACCTGAGCAGCAACTACGACGGGCAGGAGGTGGAGATGATGATACAGATCGCGCTGCTGTGCACCCAGGCGTCGCCGGAGGACCGGCCGTCCATGTCGGAGGTGGTGCGGATGCTGGAAGGGGAAGGACTCGCGGAGCGGTGGGAGGAGTGGCAGCAGGTGGAGGTGACGCGGCGGCAGGACTACGAGCGGATGCAGCAGCGCTTCGACTGGGGCGAGGACTCCATCTTCAACCAGGAAGCCATCGAGCTCTCCGCCGGCAGATGA
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| Protein seq | MDLLSVLLIIASLLPFSASDRQGDALYDMKLKLNATGNQLSDWNQNQVNPCTWNSVICDNNYNVVQVTLASMGFTGVLSPRIGELQFLNVLSLPGNKITGGIPEQIGNLSSLTSLDLEDNLLVGPIPASLGQLSKLQILILSQNNLNGTIPDTVARISSLTDIRLAYNKLSGSIPGSLFQVARYNFSGNNLTCGANFLHPCSSSISYQGSSHGSKVGIVLGTVVGAIGILIIGAVFIVCNGRRKSHLREVFVDVSGEDDRRIAFGQLKRFAWRELQLATDSFSEKNVLGQGGFGKVYKGALPDGTKIAVKRLTDYESPGGEAAFLREVELISVAVHRNLLRLIGFCTTQTERLLVYPFMQNLSVAYRLREFKPGEPILDWSARKRVAIGTARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEPVVGDFGLAKLVDVQKTSVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLQREGQLGAIVDRNLSSNYDGQEVEMMIQIALLCTQASPEDRPSMSEVVRMLEGEGLAERWEEWQQVEVTRRQDYERMQQRFDWGEDSIFNQEAIELSAGR
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 13.750557 | 81.743393 | 18.7566025 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_03g0703200 | RBH | 3.788614 | 3.905721 | 2.867503 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os03g49620 | RBH | 2.305739 | 2.442045 | 0.674421 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os03g0703200 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_03g0031510 | RBH | 2.077156 | 41.690350 | 6.714775 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_03g0031210 | RBH | 0.308161 | 5.798515 | 1.646772 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_03g0031300 | RBH | 2.718431 | 32.102711 | 11.678741 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_03g0031390 | RBH | 0.385495 | 0.325988 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_03g0031090 | RBH | 5.497243 | 26.904888 | 17.691984 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_03G0487300 | RBH | 9.5322395 | 81.4772875 | 46.3783625 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_03g0030760 | RBH | 0.756656 | 1.412715 | 0.469060 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_02G0178200 | RBH | 9.981467 | 32.370039 | 17.6869155 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_03g0031150 | RBH | 0.144673 | 0.753423 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_03g0031200 | RBH | 0.335709 | 16.523039 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_03g0031160 | RBH | 7.033159 | 41.912403 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_03g0030920 | RBH | 1.938744 | 1.983577 | 1.841062 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_03g0030950 | RBH | 0.904567 | 21.847174 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_03G030940 | RBH | 0.959896 | 1.859567 | 2.041692 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_03g0030820 | RBH | 3.735638 | 52.260235 | 5.654400 |
