Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsZS97_03G0148900 | OGI:03023520 | 16/16 | Zhenshan 97 | ZS97RS3 | HZAU | Chr03:8963574-8967968 | ||||||||
| Gene Symbol | PLS2, SQD2.3, OsSQD2.3 | ||||||||||
| DNA seq | CCCATCCGTCCTCCGTACGTGCCAATGAAATATTCGGCCGGTGGGGCGGAGGCACGCTGTCTGCAGCCAGACGCAGACCACCGGCGAGTGCGATCCGAGTGGCCGAGCCCGAGAGAAAAACCACGGCCACACCAAACCCGCCGTGCGGGGGAAGAAAAAAAGCACAATATTCTCCCTCTCGGCCTCTCCTCGCCGTAGTGCCCCCTCGGACCTCGGTTGATTTTTTGGTTCGCGCACGTCACCACCGAGAGTCCACCACCGCGGCGCACGGGAGGAGGCCCGATTCGATTCCACTCGCCCGTTCGTTCGCTCGTCCTATTTTTTTCTTCCCCCCACCACGGCAATTTTTTCTCTCCCACGGCCGCCACGCCACTGCCAGTCAACAGCTGCACCTGGGCTCCTCCTCTCCTCGTCGCCGTCACCGTCGCGCGCCGTCGTGTTGGTGGTGGTGGTGGTGTGCGGGCGAGCGCCGCTCGCGTCCCCGTGACGCTGCTTCCCAGCGCCGCTGCCTCCGCCTTCCACGCCGCGTGGGCGCGAAGGCGGGGCTTGGGAGTTGGAGGAGGAAGGATAGGGGGCACGGCACGGGTGGCAGTAGTGCAAGGCAAGCAGGTCCCCGTGTATAATTCGGGCGGCGGCGGCGGCGGGTTGGATCGGGGAATCGGCGACGCGGGCCAGAGGAGGAGGAGGATGGGGCAGCAGGCGGCGGAGGCGCAGCCGCTACTGCTGCAGGGGGACCAGGTGGACGCCGAGTGGGGCTGCAGGCCGCACCGCATTGTACTTTTCGTCGAGCCGTCGCCCTTCGCGTCAGTGCTCTCTCTCCTCGTAGTCCTACTAGTCAGATCATCGTACTAGCTTAGATCAGATCGAGATGTCAAACCTGCCGCTCTTTCGATCTATTGAACTGCAAAGTCAATAGTTTTTGCTCGTTGCTGTTTCGCAGTTACATCTCTGGGTACAAGAATCGCTTCCAGAACTTCATCAAGCATCTGCGAGAGATGGGCGATGAGGTATATGATCTTTTTACTTCATCTGGCTGCTGGCTGCTTGTGTGTGTAGGGCGTGTATATACCTTGGAATTGACGTGTGCTCTTTCGAAACAGGTGTTGGTGGTGACCACGCACAAGGGAGCTCCCGAGGAGTTCCATGGAGCTAAAGTCATTGGTTCGTGGAGGTAATCCAATACAAACTAGAAACTACTTTTACCTTCCATTTAGCATTCGGTCTACCTGAGGAGCACCAAACACAGAATACAAGAATTACTTTCCTGAAAGCACAAAACTTGCTCTCACTGCGAAATAGGGCCTTACTCGCATGCTGAAGCAAAAGGAAACAATGCAAGCGAAGTGTCATCTAGTCAACTAGCATGCTGATTTGGAACATGTGCTTGTTGTGAGGTGAAATTGGTGATGTTGCACTTGTTTTCCAATATTTTGTCTGGTCAAGTCGTCAAGTATATATATTTTAGAGGACACTAGAATTCTTCTTGTTGAAATTTCTTCTATCTGCATGCACTTAATTGCCTAAATTTCTATTTCTCAGTTTTCCATGTCCGTTATACCAAAATGTTCCACTCTCGCTGGCGTTGAGCCCTAGGATATTTTCGGCGGTGGCTAAATTTAAGCCGGACATAATCCATGCTACTTCACCTGGAGTTATGGTAATCATTAAAAACCCAATAGGTATCATTGTCCTTTCTTTTTGTAGTTTCTCACTATATATTGTGATTTCAGGTTTTTGGTGCTCGCTTTATCGCAAAGATGCTTTCAGTCCCAATGGTGATGTCATATCATACCCACCTTCCAGCGTGAGTTTCTCTTCTTAAAATCATGAATACTTCTGCGATATGAGTCCTGCATGCATAATATTGTTACGAGCAGATCTTACAGCCTCTAAATTAGGGACCAGATATAGTACTGTAGGGCAAGACCATCATAGTCCAGTGATTTCCCTGGCAGAGATATTTACTTTCGAAATTTTGGGGAAAAAAACACATTACTATGTCATGCTATTGGAGGATTAAAAAAAAACTTGGATGCATATGCATGGAATCAACAGGCAAAAGTGTTGCCTCCCCAATGTTGATTAAAGCATCCAACCGAGGCACATCATTACAACACTAATTCTTTCTGTTGCAAATTATAATACCTGGTGTTGATTCTTGAGCTGAATTCTTGTCATGACTTTCAGGTATATACCAAGATACAATTTAAATTGGTTACTTGGACCCACATGGAGTCTTATAAGTAAGCATAACATCACCTCTTAGTTTGTTCTTCATAAAAGAAATAATCTGACAGCAAAAATACAACTGTTCTTTCTCATTAAATTTGTACTGACACTCTTATTTTGTTTTGAAGGATGTCTTCATAGGTCTGCAGATCTTACTCTAGTTCCGTCAGTAGCTATTGCCGAGGACTTTGAAACTGCGAAAGTAGTATCAGGTTAAACAATTAAGATAAATCTATATTTCTTCATTTCATTCCTTCATCCATCATAACCGTAGTTTCCTTGTCTCTTCAGCAAACAGAGTTCGGCTTTGGAACAAAGGTGTTGATTCTGAAAGTTTCCATCCTAAATTTCGGAAGCATGAAATGCGCATTAAATTGAGGTTTGACCTATTTCTTTAATATTCAATAGCAGTATGTGAAAAAAAATTGTGCATAGCTAACTTATTTTCCTTTTTCTCTCTTGTTAGTGGTGGTGAACCAGAAAAACCACTCATAATACATGTGGGTCGTTTCGGGCGTGAAAAGAATTTGGATTTTCTGAAAAGGTAATCTTTTTGGCTTGTACATATCACTGTTTGTCAGTGTAAAATCAACTCCAAACAAAATTTGAAGAATATAGATGGGGGAAAAATGGAAAGAGAAAGCTCCTCAACTAACAATGGATTATTTCATAGTACATCCGTCCCAAAATATAACAACCTAGAACCGAATGTGATATTTCCTAGTACTATGAATCTGGACAACTACAGTGAAAACATCTGTGGCATGTTGTTTTCTCTGGCATGGCCATTTTCGTTAGTTGTCCCTGAGTTAGCATAACTTGCAATCGTCTTAGCCTTTTAGCTTGAATCATGCTTGTAATATGACTTACATGGTCCTGTTTATGACTTTAACCAAGCAGCCATTTCAAATTCGTCACATGTATCATAGATCACTTATCTGTATGTCACATGTTCACTACATGGTTGTTATTTTGTCATGTCATCAGAACTTTGCTTATTTTGGTGACAATACAGGGTTATGGAAAGGCTCCCAGGAGTAAGAATTGCTTTTGTTGGTGACGGACCATACAGGTGCATTCCTTAATGTTAAATATTTTTCGTTATCAACAAGACTCATACATGATAACATATATATTGAAATGACACTATTTGGAGCACTTCAGTTTTATCTTTTGCGTATGACTGGTATTATATGCACAACTGTAGGTGCCTAGCCATCTGTTTGATCCCTATAGTTTCATCTTGAATTTGGAGAAACTTATGCGGCCTGTTTAATCTTTGGCAGGGCTGAGCTGGAAAGAATGTTTACTGGCATGCCTGCAGTATTCACTGGAATGCTCCAAGGCGAGGAGCTCTCACAAGCATATGCCAGTGGCGACTTGTTTGCAATGCCTTCAGAATCTGAGACACTTGGTCAAGTAGTGCTGGAGTCCATGGCTTCTGGAGTCCCAGTTGTCGCTGCTCGTGCTGGAGGTATACCTGATATAATACCCAAGGACAAGGAGGGTAAAACCAGTTTCTTGTTTACACCCGGGGATCTCGACGAGTGTGTGAGGAAGATCGAACAGCTCCTTTCGTCGAAGGTTCTAAGAGAATCCATTGGAAGGGCTGCTAGGGAGGAGATGGAGAAGTGTGACTGGAGAGCAGCCTCGAAGACAATACGCAATGAGCACTACTGTACCGCAACGTTGTACTGGAGGAAGAAAATGGGCAGAACTAACTAGGTTTCGCTTATCGATTCAGGAATCGTTCACCGCCGTCTCCACCTAGTTACTGTTAATAACCAAAGAGTTTGTACATTGTATCCAACAGCAGCTCGCGAGTTTGTGCGGCTAGCTGCATTCATGTGTTCACAAATCACAATCATGGGATGGCCACTGACCAAAAGCTTGTATGCGAGTCATGTACATTAGACAGCTCTTTGAGATTGGCGATTACTATCGAAGTGCTAACTGCTAATTTAGAATACTGGAGGAGTTGCCTGCTGTAGTGCTGTCTCTAGAGTGAAAGTTGAATTGTGTGTTGTTACTGTGAGCTGCTACTGCCAACTTTCTGCCTTTCTGGTAGCTTTGCTACCTTTGCTTTTTGAACATTGCCATAGCGTAAAACCTCGAGACTACGGCTGTGTTTAGATCCAAAAACTTTTTCCATCACATCAACCTTAC
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| CDS seq | ATGGGGCAGCAGGCGGCGGAGGCGCAGCCGCTACTGCTGCAGGGGGACCAGGTGGACGCCGAGTGGGGCTGCAGGCCGCACCGCATTGTACTTTTCGTCGAGCCGTCGCCCTTCGCTTACATCTCTGGGTACAAGAATCGCTTCCAGAACTTCATCAAGCATCTGCGAGAGATGGGCGATGAGGTGTTGGTGGTGACCACGCACAAGGGAGCTCCCGAGGAGTTCCATGGAGCTAAAGTCATTGGTTCGTGGAGTTTTCCATGTCCGTTATACCAAAATGTTCCACTCTCGCTGGCGTTGAGCCCTAGGATATTTTCGGCGGTGGCTAAATTTAAGCCGGACATAATCCATGCTACTTCACCTGGAGTTATGGTTTTTGGTGCTCGCTTTATCGCAAAGATGCTTTCAGTCCCAATGGTGATGTCATATCATACCCACCTTCCAGCGTATATACCAAGATACAATTTAAATTGGTTACTTGGACCCACATGGAGTCTTATAAGATGTCTTCATAGGTCTGCAGATCTTACTCTAGTTCCGTCAGTAGCTATTGCCGAGGACTTTGAAACTGCGAAAGTAGTATCAGCAAACAGAGTTCGGCTTTGGAACAAAGGTGTTGATTCTGAAAGTTTCCATCCTAAATTTCGGAAGCATGAAATGCGCATTAAATTGAGTGGTGGTGAACCAGAAAAACCACTCATAATACATGTGGGTCGTTTCGGGCGTGAAAAGAATTTGGATTTTCTGAAAAGGGTTATGGAAAGGCTCCCAGGAGTAAGAATTGCTTTTGTTGGTGACGGACCATACAGGGCTGAGCTGGAAAGAATGTTTACTGGCATGCCTGCAGTATTCACTGGAATGCTCCAAGGCGAGGAGCTCTCACAAGCATATGCCAGTGGCGACTTGTTTGCAATGCCTTCAGAATCTGAGACACTTGGTCAAGTAGTGCTGGAGTCCATGGCTTCTGGAGTCCCAGTTGTCGCTGCTCGTGCTGGAGGTATACCTGATATAATACCCAAGGACAAGGAGGGTAAAACCAGTTTCTTGTTTACACCCGGGGATCTCGACGAGTGTGTGAGGAAGATCGAACAGCTCCTTTCGTCGAAGGTTCTAAGAGAATCCATTGGAAGGGCTGCTAGGGAGGAGATGGAGAAGTGTGACTGGAGAGCAGCCTCGAAGACAATACGCAATGAGCACTACTGTACCGCAACGTTGTACTGGAGGAAGAAAATGGGCAGAACTAACTAG
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| Protein seq | MGQQAAEAQPLLLQGDQVDAEWGCRPHRIVLFVEPSPFAYISGYKNRFQNFIKHLREMGDEVLVVTTHKGAPEEFHGAKVIGSWSFPCPLYQNVPLSLALSPRIFSAVAKFKPDIIHATSPGVMVFGARFIAKMLSVPMVMSYHTHLPAYIPRYNLNWLLGPTWSLIRCLHRSADLTLVPSVAIAEDFETAKVVSANRVRLWNKGVDSESFHPKFRKHEMRIKLSGGEPEKPLIIHVGRFGREKNLDFLKRVMERLPGVRIAFVGDGPYRAELERMFTGMPAVFTGMLQGEELSQAYASGDLFAMPSESETLGQVVLESMASGVPVVAARAGGIPDIIPKDKEGKTSFLFTPGDLDECVRKIEQLLSSKVLRESIGRAAREEMEKCDWRAASKTIRNEHYCTATLYWRKKMGRTN |
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| Function | Sulfoquinovosyl transferase SQD2 [UniProtKB/Swiss-Prot:Q8S4F6] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsZS97_03G0148900 | OsZS97_03T0148900.1 | Chr03 | 8963716 | 8967788 | + | makerRMon | ||
| CDS seq | ATGGGGCAGCAGGCGGCGGAGGCGCAGCCGCTACTGCTGCAGGGGGACCAGGTGGACGCCGAGTGGGGCTGCAGGCCGCACCGCATTGTACTTTTCGTCGAGCCGTCGCCCTTCGCTTACATCTCTGGGTACAAGAATCGCTTCCAGAACTTCATCAAGCATCTGCGAGAGATGGGCGATGAGGTGTTGGTGGTGACCACGCACAAGGGAGCTCCCGAGGAGTTCCATGGAGCTAAAGTCATTGGTTCGTGGAGTTTTCCATGTCCGTTATACCAAAATGTTCCACTCTCGCTGGCGTTGAGCCCTAGGATATTTTCGGCGGTGGCTAAATTTAAGCCGGACATAATCCATGCTACTTCACCTGGAGTTATGGTTTTTGGTGCTCGCTTTATCGCAAAGATGCTTTCAGTCCCAATGGTGATGTCATATCATACCCACCTTCCAGCGTATATACCAAGATACAATTTAAATTGGTTACTTGGACCCACATGGAGTCTTATAAGATGTCTTCATAGGTCTGCAGATCTTACTCTAGTTCCGTCAGTAGCTATTGCCGAGGACTTTGAAACTGCGAAAGTAGTATCAGCAAACAGAGTTCGGCTTTGGAACAAAGGTGTTGATTCTGAAAGTTTCCATCCTAAATTTCGGAAGCATGAAATGCGCATTAAATTGAGTGGTGGTGAACCAGAAAAACCACTCATAATACATGTGGGTCGTTTCGGGCGTGAAAAGAATTTGGATTTTCTGAAAAGGGTTATGGAAAGGCTCCCAGGAGTAAGAATTGCTTTTGTTGGTGACGGACCATACAGGGCTGAGCTGGAAAGAATGTTTACTGGCATGCCTGCAGTATTCACTGGAATGCTCCAAGGCGAGGAGCTCTCACAAGCATATGCCAGTGGCGACTTGTTTGCAATGCCTTCAGAATCTGAGACACTTGGTCAAGTAGTGCTGGAGTCCATGGCTTCTGGAGTCCCAGTTGTCGCTGCTCGTGCTGGAGGTATACCTGATATAATACCCAAGGACAAGGAGGGTAAAACCAGTTTCTTGTTTACACCCGGGGATCTCGACGAGTGTGTGAGGAAGATCGAACAGCTCCTTTCGTCGAAGGTTCTAAGAGAATCCATTGGAAGGGCTGCTAGGGAGGAGATGGAGAAGTGTGACTGGAGAGCAGCCTCGAAGACAATACGCAATGAGCACTACTGTACCGCAACGTTGTACTGGAGGAAGAAAATGGGCAGAACTAACTAG
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| Protein seq | MGQQAAEAQPLLLQGDQVDAEWGCRPHRIVLFVEPSPFAYISGYKNRFQNFIKHLREMGDEVLVVTTHKGAPEEFHGAKVIGSWSFPCPLYQNVPLSLALSPRIFSAVAKFKPDIIHATSPGVMVFGARFIAKMLSVPMVMSYHTHLPAYIPRYNLNWLLGPTWSLIRCLHRSADLTLVPSVAIAEDFETAKVVSANRVRLWNKGVDSESFHPKFRKHEMRIKLSGGEPEKPLIIHVGRFGREKNLDFLKRVMERLPGVRIAFVGDGPYRAELERMFTGMPAVFTGMLQGEELSQAYASGDLFAMPSESETLGQVVLESMASGVPVVAARAGGIPDIIPKDKEGKTSFLFTPGDLDECVRKIEQLLSSKVLRESIGRAAREEMEKCDWRAASKTIRNEHYCTATLYWRKKMGRTN
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsZS97_03G0148900 | OsZS97_03T0148900.2 | Chr03 | 8963592 | 8967834 | + | makerRMon | ||
| CDS seq | ATGGGCGATGAGGTGTTGGTGGTGACCACGCACAAGGGAGCTCCCGAGGAGTTCCATGGAGCTAAAGTCATTGGTTCGTGGAGTTTTCCATGTCCGTTATACCAAAATGTTCCACTCTCGCTGGCGTTGAGCCCTAGGATATTTTCGGCGGTGGCTAAATTTAAGCCGGACATAATCCATGCTACTTCACCTGGAGTTATGGTTTTTGGTGCTCGCTTTATCGCAAAGATGCTTTCAGTCCCAATGGTGATGTCATATCATACCCACCTTCCAGCGTATATACCAAGATACAATTTAAATTGGTTACTTGGACCCACATGGAGTCTTATAAGATGTCTTCATAGGTCTGCAGATCTTACTCTAGTTCCGTCAGTAGCTATTGCCGAGGACTTTGAAACTGCGAAAGTAGTATCAGCAAACAGAGTTCGGCTTTGGAACAAAGGTGTTGATTCTGAAAGTTTCCATCCTAAATTTCGGAAGCATGAAATGCGCATTAAATTGAGTGGTGGTGAACCAGAAAAACCACTCATAATACATGTGGGTCGTTTCGGGCGTGAAAAGAATTTGGATTTTCTGAAAAGGGTTATGGAAAGGCTCCCAGGAGTAAGAATTGCTTTTGTTGGTGACGGACCATACAGGGCTGAGCTGGAAAGAATGTTTACTGGCATGCCTGCAGTATTCACTGGAATGCTCCAAGGCGAGGAGCTCTCACAAGCATATGCCAGTGGCGACTTGTTTGCAATGCCTTCAGAATCTGAGACACTTGGTCAAGTAGTGCTGGAGTCCATGGCTTCTGGAGTCCCAGTTGTCGCTGCTCGTGCTGGAGGTATACCTGATATAATACCCAAGGACAAGGAGGGTAAAACCAGTTTCTTGTTTACACCCGGGGATCTCGACGAGTGTGTGAGGAAGATCGAACAGCTCCTTTCGTCGAAGGTTCTAAGAGAATCCATTGGAAGGGCTGCTAGGGAGGAGATGGAGAAGTGTGACTGGAGAGCAGCCTCGAAGACAATACGCAATGAGCACTACTGTACCGCAACGTTGTACTGGAGGAAGAAAATGGGCAGAACTAACTAG
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| Protein seq | MGDEVLVVTTHKGAPEEFHGAKVIGSWSFPCPLYQNVPLSLALSPRIFSAVAKFKPDIIHATSPGVMVFGARFIAKMLSVPMVMSYHTHLPAYIPRYNLNWLLGPTWSLIRCLHRSADLTLVPSVAIAEDFETAKVVSANRVRLWNKGVDSESFHPKFRKHEMRIKLSGGEPEKPLIIHVGRFGREKNLDFLKRVMERLPGVRIAFVGDGPYRAELERMFTGMPAVFTGMLQGEELSQAYASGDLFAMPSESETLGQVVLESMASGVPVVAARAGGIPDIIPKDKEGKTSFLFTPGDLDECVRKIEQLLSSKVLRESIGRAAREEMEKCDWRAASKTIRNEHYCTATLYWRKKMGRTN
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsZS97_03G0148900 | OsZS97_03T0148900.3 | Chr03 | 8963574 | 8967942 | + | makerRMon | ||
| CDS seq | ATGGGGCAGCAGGCGGCGGAGGCGCAGCCGCTACTGCTGCAGGGGGACCAGGTGGACGCCGAGTGGGGCTGCAGGCCGCACCGCATTGTACTTTTCGTCGAGCCGTCGCCCTTCGCTTACATCTCTGGGTACAAGAATCGCTTCCAGAACTTCATCAAGCATCTGCGAGAGATGGGCGATGAGGTGTTGGTGGTGACCACGCACAAGGGAGCTCCCGAGGAGTTCCATGGAGCTAAAGTCATTGGTTCGTGGAGTTTTCCATGTCCGTTATACCAAAATGTTCCACTCTCGCTGGCGTTGAGCCCTAGGATATTTTCGGCGGTGGCTAAATTTAAGCCGGACATAATCCATGCTACTTCACCTGGAGTTATGGTTTTTGGTGCTCGCTTTATCGCAAAGATGCTTTCAGTCCCAATGGTGATGTCATATCATACCCACCTTCCAGCGTATATACCAAGATACAATTTAAATTGGTTACTTGGACCCACATGGAGTCTTATAAGATGTCTTCATAGGTCTGCAGATCTTACTCTAGTTCCGTCAGTAGCTATTGCCGAGGACTTTGAAACTGCGAAAGTAGTATCAGCAAACAGAGTTCGGCTTTGGAACAAAGGTGTTGATTCTGAAAGTTTCCATCCTAAATTTCGGAAGCATGAAATGCGCATTAAATTGAGTGGTGGTGAACCAGAAAAACCACTCATAATACATGTGGGTCGTTTCGGGCGTGAAAAGAATTTGGATTTTCTGAAAAGGGTTATGGAAAGGCTCCCAGGAGTAAGAATTGCTTTTGTTGGTGACGGACCATACAGGGCTGAGCTGGAAAGAATGTTTACTGGCATGCCTGCAGTATTCACTGGAATGCTCCAAGGCGAGGAGCTCTCACAAGCATATGCCAGTGGCGACTTGTTTGCAATGCCTTCAGAATCTGAGACACTTGGTCAAGTAGTGCTGGAGTCCATGGCTTCTGGAGTCCCAGTTGTCGCTGCTCGTGCTGGAGGTATACCTGATATAATACCCAAGGACAAGGAGGGTAAAACCAGTTTCTTGTTTACACCCGGGGATCTCGACGAGTGTGTGAGGAAGATCGAACAGCTCCTTTCGTCGAAGGTTCTAAGAGAATCCATTGGAAGGGCTGCTAGGGAGGAGATGGAGAAGTGTGACTGGAGAGCAGCCTCGAAGACAATACGCAATGAGCACTACTGTACCGCAACGTTGTACTGGAGGAAGAAAATGGGCAGAACTAACTAG
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| Protein seq | MGQQAAEAQPLLLQGDQVDAEWGCRPHRIVLFVEPSPFAYISGYKNRFQNFIKHLREMGDEVLVVTTHKGAPEEFHGAKVIGSWSFPCPLYQNVPLSLALSPRIFSAVAKFKPDIIHATSPGVMVFGARFIAKMLSVPMVMSYHTHLPAYIPRYNLNWLLGPTWSLIRCLHRSADLTLVPSVAIAEDFETAKVVSANRVRLWNKGVDSESFHPKFRKHEMRIKLSGGEPEKPLIIHVGRFGREKNLDFLKRVMERLPGVRIAFVGDGPYRAELERMFTGMPAVFTGMLQGEELSQAYASGDLFAMPSESETLGQVVLESMASGVPVVAARAGGIPDIIPKDKEGKTSFLFTPGDLDECVRKIEQLLSSKVLRESIGRAAREEMEKCDWRAASKTIRNEHYCTATLYWRKKMGRTN
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsZS97_03G0148900 | OsZS97_03T0148900.4 | Chr03 | 8963576 | 8967968 | + | makerRMon | ||
| CDS seq | ATGGTTTTTGGTGCTCGCTTTATCGCAAAGATGCTTTCAGTCCCAATGGTGATGTCATATCATACCCACCTTCCAGCGTATATACCAAGATACAATTTAAATTGGTTACTTGGACCCACATGGAGTCTTATAAGATGTCTTCATAGGTCTGCAGATCTTACTCTAGTTCCGTCAGTAGCTATTGCCGAGGACTTTGAAACTGCGAAAGTAGTATCAGCAAACAGAGTTCGGCTTTGGAACAAAGGTGTTGATTCTGAAAGTTTCCATCCTAAATTTCGGAAGCATGAAATGCGCATTAAATTGAGTGGTGGTGAACCAGAAAAACCACTCATAATACATGTGGGTCGTTTCGGGCGTGAAAAGAATTTGGATTTTCTGAAAAGGGTTATGGAAAGGCTCCCAGGAGTAAGAATTGCTTTTGTTGGTGACGGACCATACAGGGCTGAGCTGGAAAGAATGTTTACTGGCATGCCTGCAGTATTCACTGGAATGCTCCAAGGCGAGGAGCTCTCACAAGCATATGCCAGTGGCGACTTGTTTGCAATGCCTTCAGAATCTGAGACACTTGGTCAAGTAGTGCTGGAGTCCATGGCTTCTGGAGTCCCAGTTGTCGCTGCTCGTGCTGGAGGTATACCTGATATAATACCCAAGGACAAGGAGGGTAAAACCAGTTTCTTGTTTACACCCGGGGATCTCGACGAGTGTGTGAGGAAGATCGAACAGCTCCTTTCGTCGAAGGTTCTAAGAGAATCCATTGGAAGGGCTGCTAGGGAGGAGATGGAGAAGTGTGACTGGAGAGCAGCCTCGAAGACAATACGCAATGAGCACTACTGTACCGCAACGTTGTACTGGAGGAAGAAAATGGGCAGAACTAACTAG
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| Protein seq | MVFGARFIAKMLSVPMVMSYHTHLPAYIPRYNLNWLLGPTWSLIRCLHRSADLTLVPSVAIAEDFETAKVVSANRVRLWNKGVDSESFHPKFRKHEMRIKLSGGEPEKPLIIHVGRFGREKNLDFLKRVMERLPGVRIAFVGDGPYRAELERMFTGMPAVFTGMLQGEELSQAYASGDLFAMPSESETLGQVVLESMASGVPVVAARAGGIPDIIPKDKEGKTSFLFTPGDLDECVRKIEQLLSSKVLRESIGRAAREEMEKCDWRAASKTIRNEHYCTATLYWRKKMGRTN
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 14.0715675 | 15.276558 | 11.949297 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_03g0265100 | RBH | 3.195137 | 2.449174 | 3.942035 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os03g15840 | RBH | 2.354678 | 2.046198 | 1.056311 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os03g0265100 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_03g0012000 | RBH | 0.978563 | 11.555347 | 3.288324 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_03g0011820 | RBH | 0.810506 | 3.194081 | 1.325551 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_03g0011850 | RBH | 2.885194 | 14.338746 | 5.916972 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_03g0011800 | RBH | 0.380448 | 0.631836 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_03g0011670 | RBH | 14.079039 | 41.198421 | 8.108065 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_03G0147500 | RBH | 10.2550835 | 14.7099045 | 10.8883425 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_03g0011560 | RBH | 0.322839 | 1.362103 | 0.631911 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_01G0039700 | RBH | 11.9267575 | 1.0704635 | 16.902441 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_03g0011710 | RBH | 0.993149 | 0.802694 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_03g0011790 | RBH | 2.537637 | 35.471100 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_03g0011770 | RBH | 6.759902 | 60.686813 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_03g0011730 | RBH | 1.753203 | 2.206609 | 1.142944 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_03g0011670 | RBH | 0.334501 | 9.582902 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_03G011650 | RBH | 0.812738 | 5.870450 | 0.907663 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_03g0011520 | RBH | 1.447456 | 22.255415 | 6.146165 |
