Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsZS97_03G0081600 | OGI:03013110 | 16/16 | Zhenshan 97 | ZS97RS3 | HZAU | Chr03:4865734-4868095 | ||||||||
| Gene Symbol | PAOA, PAOa, OsPAO2, PAO2, OsPAOa | ||||||||||
| DNA seq | ATGGACAGTTTGCCAAATGGCCCGTCGTCGCCGGTAGACATGGTGGTAGACTACTACCTGTACGACTACGAGTACGCCGAGCCGCCGCGCGTGACCAGCCTGCAGAACGCCGTTCCCCAGAGGACCTTCAGCGACTTCGGAGATGACGTCTACTTCGTCGCCGACCAACGGGGCTACGAGTCCGTCGTCCACTACCTCGCCGGCCAGTACCTCAACACCGACGACTCCGGCAACGTCGCCGACCCCCGCCTGCAGCTCAACAAGGTTGCCACTTCTCTGTAACCCATACATATCACTACTGTCAGAAAAGAAAGGAATGCATCATCGATCCATGGTTAATCGTGCGGTTATAGTTACTCGATCGTGAGACACTTGTAAATTTACAAGCACGTCATGGGTGGTGAATTTTATAGGTGGTGCGAGAGATCTCCTACTCCTCGAGCGGAGTCACCGTCAAGACGGAGGACGGCTCAGTGTACCAGGCAGACTATCGTCATGGTCTCTGCCAGCTTGGGAGTCCTGCAGAGCGATCTTATACAGTTCAAGCCACAGCTGCCTGTAAGTTTCGAGTTCTCTGTCCTGCGCGCTTCTCCCGAATAGCATCTGATCGATGTGTTCTGCATGTATTTGATCAGAAATGGAAGATTCTTGCAATCTACGAATTCGACATGGCTGTGTACACCAAGATATTCGTCAAGTTCCCAAAGAGATTCTGGCCCGAAGGGGAAGGGAGGGAGTTCTTCCTCTACGCGAGCACCAGGAGAGGTTACTATGGAATATGGCAGGTACACAAGTCAGCGATACAAATAGCTGAATGCATATCTCAAAAATTTACAAGAGTTACACCGTGTTTAGTTCCAAAATATTTCTTCAAACTTCCAACTTTTCCATCACATCAAAACTTTCCTACACACATAAGCTTCCAACTTTTTCAACACATCGTTCCAATTTCAACCAAACTTTCAATTTTAACGTGAACTAAACACAGCCTTAGTACATCATTCGTACTACTGTAGCAAAACCACTGACCATGAATTGAAATACAGTTAACAGAACCAAAACCTTTGTATTCAATGATCAATGCTCCTTCTCGGTCACACGGGGGGAGGGGAAAAAAATCAGTCGCTCCCCCTCCCCCCATCACGTGCACACCAGCAGCCCCTCTGGCCCCCACCACATGTCCCCTGTCCCTACCTGCCACTGATCTACACACACAACTCAATTGCAACAAATCACCCACATATTTTAAAAACCCTCTATTAAGGGAATTTGGTTTATTTTTTGTTCCACCAAAAATGTTTCACCTAATGTATTCATAATGTTTCACTATATATAGATCTAATGTTGCTGCAGTGAACTAAAATATTCCATTGCAAAAAAAAACCCACATATTTTGGAAACTCCCTATTAAGGGAATTCGTTTTATTTTTTTGTTCTACCAAAAAAATGTTTCAGCTAGTGTACTTATAATGTTTCACTATGTATGAATCAAATGTTGCAGTGAACTAAAACATTTTTTCGCTATTTGCTGAAACATTGTTTTTATATAAGATAAAACAACATTCGATTTAAACGAGTGAAATATTTTCGATCTACTTAGTGAAACAATTCCGATATACTGGTGGAACATCGTGCAACATTTAAAAATAATTCAATAATAAGCTAAAAAAATTCGTCGGAATATATCCATGTGTGTTCTTGTTTTGAAGATTTAATTGCAACGAATTTAATGGTGCAATCGGATCATGATTTTGAATAAGTAATTTAAAAGAAAAATCAGTTTAAAATAGTTTTGCACGTAAATCGGACACTGACGTCATACTGACATCAGCACCCGATTTTTCTCCAAACCGATCGGACGTCCGACCCGTACACTCTCCCTAATTTTGTGTGTTTATTCAGGAGTTACGATAAGCAATACCCAGATTCCAATGTTCTTCTTGTCACGGTCACCGACAAGGAGTCGAGGCGGATCGAGCAGCAGTCGGACAACCAGACCAAGGCAGAGATCATGGAGGTGCTGAGGAACATGTTCCCTGACCAGGACGTCCCTGACGCCACTGACATCCTCGTCCCAAGATGGTGGTCAAACAGGTTCTACAAGGGCACCTTCTCCAACTGGCCCATTGGCGTCAACCGCTACGAATATGACCAGCTCAGGGTACTCCACAAAAATTGCTAATCACATCATAATGTTAATTGCAAATGTGATTTTATGATTGAGCCTGACAAGATTTCTAATGCTAAAGTTTTGTGCTTAATTATTCGCTTTTCTGCGTCAGGTATTTACTCTGCGGATATTCTGATCGACTGCGCGCAGAACCAGATGTGCAAGTATCACGTTCAGGGCAAGTACGACTAG
More
|
||||||||||
| CDS seq | ATGGACAGTTTGCCAAATGGCCCGTCGTCGCCGGTAGACATGGTGGTAGACTACTACCTGTACGACTACGAGTACGCCGAGCCGCCGCGCGTGACCAGCCTGCAGAACGCCGTTCCCCAGAGGACCTTCAGCGACTTCGGAGATGACGTCTACTTCGTCGCCGACCAACGGGGCTACGAGTCCGTCGTCCACTACCTCGCCGGCCAGTACCTCAACACCGACGACTCCGGCAACGTCGCCGACCCCCGCCTGCAGCTCAACAAGGTGGTGCGAGAGATCTCCTACTCCTCGAGCGGAGTCACCGTCAAGACGGAGGACGGCTCAGTGTACCAGGCAGACTATCGTCATGGTCTCTGCCAGCTTGGGAGTCCTGCAGAGCGATCTTATACAAAATGGAAGATTCTTGCAATCTACGAATTCGACATGGCTGTGTACACCAAGATATTCGTCAAGTTCCCAAAGAGATTCTGGCCCGAAGGGGAAGGGAGGGAGTTCTTCCTCTACGCGAGCACCAGGAGAGGTTACTATGGAATATGGCAGGAGTCGAGGCGGATCGAGCAGCAGTCGGACAACCAGACCAAGGCAGAGATCATGGAGGTGCTGAGGAACATGTTCCCTGACCAGGACGTCCCTGACGCCACTGACATCCTCGTCCCAAGATGGTGGTCAAACAGGTTCTACAAGGGCACCTTCTCCAACTGGCCCATTGGCGTCAACCGCTACGAATATGACCAGCTCAGGAACCAGATGTGCAAGTATCACGTTCAGGGCAAGTACGACTAG
More
|
||||||||||
| Protein seq | MDSLPNGPSSPVDMVVDYYLYDYEYAEPPRVTSLQNAVPQRTFSDFGDDVYFVADQRGYESVVHYLAGQYLNTDDSGNVADPRLQLNKVVREISYSSSGVTVKTEDGSVYQADYRHGLCQLGSPAERSYTKWKILAIYEFDMAVYTKIFVKFPKRFWPEGEGREFFLYASTRRGYYGIWQESRRIEQQSDNQTKAEIMEVLRNMFPDQDVPDATDILVPRWWSNRFYKGTFSNWPIGVNRYEYDQLRNQMCKYHVQGKYD |
||||||||||
| Function | Polyamine oxidase 6 [UniProtKB/Swiss-Prot:A0A0P0XM10] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsZS97_03G0081600 | OsZS97_03T0081600.1 | Chr03 | 4865734 | 4868095 | + | makerRMon | ||
| CDS seq | ATGGACAGTTTGCCAAATGGCCCGTCGTCGCCGGTAGACATGGTGGTAGACTACTACCTGTACGACTACGAGTACGCCGAGCCGCCGCGCGTGACCAGCCTGCAGAACGCCGTTCCCCAGAGGACCTTCAGCGACTTCGGAGATGACGTCTACTTCGTCGCCGACCAACGGGGCTACGAGTCCGTCGTCCACTACCTCGCCGGCCAGTACCTCAACACCGACGACTCCGGCAACGTCGCCGACCCCCGCCTGCAGCTCAACAAGGTGGTGCGAGAGATCTCCTACTCCTCGAGCGGAGTCACCGTCAAGACGGAGGACGGCTCAGTGTACCAGGCAGACTATCGTCATGGTCTCTGCCAGCTTGGGAGTCCTGCAGAGCGATCTTATACAAAATGGAAGATTCTTGCAATCTACGAATTCGACATGGCTGTGTACACCAAGATATTCGTCAAGTTCCCAAAGAGATTCTGGCCCGAAGGGGAAGGGAGGGAGTTCTTCCTCTACGCGAGCACCAGGAGAGGTTACTATGGAATATGGCAGGAGTCGAGGCGGATCGAGCAGCAGTCGGACAACCAGACCAAGGCAGAGATCATGGAGGTGCTGAGGAACATGTTCCCTGACCAGGACGTCCCTGACGCCACTGACATCCTCGTCCCAAGATGGTGGTCAAACAGGTTCTACAAGGGCACCTTCTCCAACTGGCCCATTGGCGTCAACCGCTACGAATATGACCAGCTCAGGAACCAGATGTGCAAGTATCACGTTCAGGGCAAGTACGACTAG
More
|
|||||||
| Protein seq | MDSLPNGPSSPVDMVVDYYLYDYEYAEPPRVTSLQNAVPQRTFSDFGDDVYFVADQRGYESVVHYLAGQYLNTDDSGNVADPRLQLNKVVREISYSSSGVTVKTEDGSVYQADYRHGLCQLGSPAERSYTKWKILAIYEFDMAVYTKIFVKFPKRFWPEGEGREFFLYASTRRGYYGIWQESRRIEQQSDNQTKAEIMEVLRNMFPDQDVPDATDILVPRWWSNRFYKGTFSNWPIGVNRYEYDQLRNQMCKYHVQGKYD
More
|
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0 | 0 | 0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_03g0193400 | RBH | 0.000000 | 0.000000 | 0.000000 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os03g09810 | RBH | 0.036348 | 0.0 | 0.000000 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os03g0193400 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_03g0006900 | RBH | 0.000000 | 0.0 | 0.000000 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_03g0006870 | RBH | 0.000000 | 0.0 | 0.279698 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_03g0006930 | RBH | 0.000000 | 1.055185 | 0.861692 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_03g0006900 | RBH | 0.000000 | 0.038926 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_03g0006800 | RBH | 0.0 | 4.544835 | 1.756871 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_03G0081200 | RBH | 0.0442555 | 0.290944 | 0.211414 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_03g0006730 | RBH | 0.0 | 0.0 | 0.100178 |
| Zhenshan 97 | ZS97RS3 | HZAU | NA | NA | NA | NA | NA |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_03g0006760 | RBH | 0.0 | 0.000000 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_03g0006820 | RBH | 0.000000 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_03g0006790 | RBH | 0.0 | 0.000000 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_03g0006800 | RBH | 0.0 | 0.000000 | 0.000000 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_03g0006780 | RBH | 0.0 | 0.000000 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_03G006820 | RBH | 0.0 | 0.000000 | 0.000000 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_03g0006640 | SBH | 0.0 | 2.168772 | 0.743761 |
