Basic Info |
Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
OsZS97_02G0414900 | OGI:02067540 | 16/16 | Zhenshan 97 | ZS97RS3 | HZAU | Chr02:24998010-24999212 | ||||||||
Gene Symbol | - | ||||||||||
DNA seq | ATGGGGGATTTGATCTTGGATCCCTACATGGAGGACGCGATCATGGATCATCCCTGCCTCGCCGAACTTCTTGCTGATCAAACATCGCTCCCAATGTTCCATCCTTTCTCCGGCGGCGGCACTCCGCAGATGGTGGATACCGACACCTTCCTCCGCGCCATCGGCGCACTGCCTCCGCTTGCACCGCCACCGGCAGCTCCGCTCGCACCGGCGCCGCCACCGGACTCCCCCCGTACCCCTCACACCTACGGCAGCTTCCTCCCAATCTACGGTGATCTTCCACCGCTCTCCGTCACCGTCGTCCAGGAGACCTTGCCGCTGCCAGAAGGCGGCGATCACCCGGTGCCACCCAAGAAGACGATCGATGTCGCACCACTGCTGCCAGAGCACGCTGATCAGCCGGTGGTCACCAACAACTCAGCGACGACACGACCGCAGCTGTGCGCGCCCTACGACGACGACATCGAGGCCACCCTCCGTGCCATGGAGACGAACCCCGCGGAGAGGCCCTCCCCGTACTTCTTGGAGACGACACAAGGTGGGCGGATGACCGCACTGGTGCGCGCCTCGATGATCGCCTTCATGGACGAGTTCAGCCGGTTCTACGAGCTCGCCGATGGCACGCTCCAGCGCGCCGCCTACTTCCTGGACCGCTACCTGTCGGTGACACCCGAGTCGGACGACGTGCTGCAGCTCCGCCTCGTCGGGGCCACGGCCGTGTTCCTCGCCGCCAAGTACGAGGACCAGTACACCCTGAGGAAGATCGACGCCAGCATGGTCGCCGCCCGGTGCGGCTACACTAGCGAGACCAGGCACAAGATGGTGTCGTGCATGGAGACCGAGATCCTCGCCGCGCTCGACTACAACCTAAGCGGCCCGACGGCGTCCACGTTCGTGCAGCACTTCACGAGGTACTACGGCGACGGAAAAGAAGAGGAGCTGTTGAAGGAGGCGGCGCATCGGTTCACCGACGGGTCGCTGCTGACGTACGGGTTCCACCGCTACCTGCCGTCCGTGGTGGCGGCGTCGGCGATCTTCCTGGCGAGGCTGCACGTGCTGGGGCATGAGCCGTGGAGCAGGGATCTCGCCGAGCTCACCGGGTACGAGGCCATCGACTTGATGGGCTGCGTCTGCGACATGTACAGTCAAATCGCATGTCCTCGCTTTGCTCTCTTTCAAGAGTACTTCTTCCAGGATCCATAG
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CDS seq | ATGGGGGATTTGATCTTGGATCCCTACATGGAGGACGCGATCATGGATCATCCCTGCCTCGCCGAACTTCTTGCTGATCAAACATCGCTCCCAATGTTCCATCCTTTCTCCGGCGGCGGCACTCCGCAGATGGTGGATACCGACACCTTCCTCCGCGCCATCGGCGCACTGCCTCCGCTTGCACCGCCACCGGCAGCTCCGCTCGCACCGGCGCCGCCACCGGACTCCCCCCGTACCCCTCACACCTACGGCAGCTTCCTCCCAATCTACGGTGATCTTCCACCGCTCTCCGTCACCGTCGTCCAGGAGACCTTGCCGCTGCCAGAAGGCGGCGATCACCCGGTGCCACCCAAGAAGACGATCGATGTCGCACCACTGCTGCCAGAGCACGCTGATCAGCCGGTGGTCACCAACAACTCAGCGACGACACGACCGCAGCTGTGCGCGCCCTACGACGACGACATCGAGGCCACCCTCCGTGCCATGGAGACGAACCCCGCGGAGAGGCCCTCCCCGTACTTCTTGGAGACGACACAAGGTGGGCGGATGACCGCACTGGTGCGCGCCTCGATGATCGCCTTCATGGACGAGTTCAGCCGGTTCTACGAGCTCGCCGATGGCACGCTCCAGCGCGCCGCCTACTTCCTGGACCGCTACCTGTCGGTGACACCCGAGTCGGACGACGTGCTGCAGCTCCGCCTCGTCGGGGCCACGGCCGTGTTCCTCGCCGCCAAGTACGAGGACCAGTACACCCTGAGGAAGATCGACGCCAGCATGGTCGCCGCCCGGTGCGGCTACACTAGCGAGACCAGGCACAAGATGGTGTCGTGCATGGAGACCGAGATCCTCGCCGCGCTCGACTACAACCTAAGCGGCCCGACGGCGTCCACGTTCGTGCAGCACTTCACGAGGTACTACGGCGACGGAAAAGAAGAGGAGCTGTTGAAGGAGGCGGCGCATCGGTTCACCGACGGGTCGCTGCTGACGTACGGGTTCCACCGCTACCTGCCGTCCGTGGTGGCGGCGTCGGCGATCTTCCTGGCGAGGCTGCACGTGCTGGGGCATGAGCCGTGGAGCAGGGATCTCGCCGAGCTCACCGGGTACGAGGCCATCGACTTGATGGGCTGCGTCTGCGACATGTACAGTCAAATCGCATGTCCTCGCTTTGCTCTCTTTCAAGAGTACTTCTTCCAGGATCCATAG
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Protein seq | MGDLILDPYMEDAIMDHPCLAELLADQTSLPMFHPFSGGGTPQMVDTDTFLRAIGALPPLAPPPAAPLAPAPPPDSPRTPHTYGSFLPIYGDLPPLSVTVVQETLPLPEGGDHPVPPKKTIDVAPLLPEHADQPVVTNNSATTRPQLCAPYDDDIEATLRAMETNPAERPSPYFLETTQGGRMTALVRASMIAFMDEFSRFYELADGTLQRAAYFLDRYLSVTPESDDVLQLRLVGATAVFLAAKYEDQYTLRKIDASMVAARCGYTSETRHKMVSCMETEILAALDYNLSGPTASTFVQHFTRYYGDGKEEELLKEAAHRFTDGSLLTYGFHRYLPSVVAASAIFLARLHVLGHEPWSRDLAELTGYEAIDLMGCVCDMYSQIACPRFALFQEYFFQDP |
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Function | Putative cyclin-F1-3 [UniProtKB/Swiss-Prot:Q6K8S1] |
Transcripts
Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
OsZS97_02G0414900 | OsZS97_02T0414900.1 | Chr02 | 24998010 | 24999212 | + | makerRMon | ||
CDS seq | ATGGGGGATTTGATCTTGGATCCCTACATGGAGGACGCGATCATGGATCATCCCTGCCTCGCCGAACTTCTTGCTGATCAAACATCGCTCCCAATGTTCCATCCTTTCTCCGGCGGCGGCACTCCGCAGATGGTGGATACCGACACCTTCCTCCGCGCCATCGGCGCACTGCCTCCGCTTGCACCGCCACCGGCAGCTCCGCTCGCACCGGCGCCGCCACCGGACTCCCCCCGTACCCCTCACACCTACGGCAGCTTCCTCCCAATCTACGGTGATCTTCCACCGCTCTCCGTCACCGTCGTCCAGGAGACCTTGCCGCTGCCAGAAGGCGGCGATCACCCGGTGCCACCCAAGAAGACGATCGATGTCGCACCACTGCTGCCAGAGCACGCTGATCAGCCGGTGGTCACCAACAACTCAGCGACGACACGACCGCAGCTGTGCGCGCCCTACGACGACGACATCGAGGCCACCCTCCGTGCCATGGAGACGAACCCCGCGGAGAGGCCCTCCCCGTACTTCTTGGAGACGACACAAGGTGGGCGGATGACCGCACTGGTGCGCGCCTCGATGATCGCCTTCATGGACGAGTTCAGCCGGTTCTACGAGCTCGCCGATGGCACGCTCCAGCGCGCCGCCTACTTCCTGGACCGCTACCTGTCGGTGACACCCGAGTCGGACGACGTGCTGCAGCTCCGCCTCGTCGGGGCCACGGCCGTGTTCCTCGCCGCCAAGTACGAGGACCAGTACACCCTGAGGAAGATCGACGCCAGCATGGTCGCCGCCCGGTGCGGCTACACTAGCGAGACCAGGCACAAGATGGTGTCGTGCATGGAGACCGAGATCCTCGCCGCGCTCGACTACAACCTAAGCGGCCCGACGGCGTCCACGTTCGTGCAGCACTTCACGAGGTACTACGGCGACGGAAAAGAAGAGGAGCTGTTGAAGGAGGCGGCGCATCGGTTCACCGACGGGTCGCTGCTGACGTACGGGTTCCACCGCTACCTGCCGTCCGTGGTGGCGGCGTCGGCGATCTTCCTGGCGAGGCTGCACGTGCTGGGGCATGAGCCGTGGAGCAGGGATCTCGCCGAGCTCACCGGGTACGAGGCCATCGACTTGATGGGCTGCGTCTGCGACATGTACAGTCAAATCGCATGTCCTCGCTTTGCTCTCTTTCAAGAGTACTTCTTCCAGGATCCATAG
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Protein seq | MGDLILDPYMEDAIMDHPCLAELLADQTSLPMFHPFSGGGTPQMVDTDTFLRAIGALPPLAPPPAAPLAPAPPPDSPRTPHTYGSFLPIYGDLPPLSVTVVQETLPLPEGGDHPVPPKKTIDVAPLLPEHADQPVVTNNSATTRPQLCAPYDDDIEATLRAMETNPAERPSPYFLETTQGGRMTALVRASMIAFMDEFSRFYELADGTLQRAAYFLDRYLSVTPESDDVLQLRLVGATAVFLAAKYEDQYTLRKIDASMVAARCGYTSETRHKMVSCMETEILAALDYNLSGPTASTFVQHFTRYYGDGKEEELLKEAAHRFTDGSLLTYGFHRYLPSVVAASAIFLARLHVLGHEPWSRDLAELTGYEAIDLMGCVCDMYSQIACPRFALFQEYFFQDP
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Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
Leaf | Root | Panicle | |
FPKM | 0 | 0 | 0 |
Homologues
Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
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Leaf | Root | Panicle | |||
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_02g0604800 | SBH | 0.0 | 0.0 | 0.0 |
Nipponbare | IRGSP 1.0 | MSU | LOC_Os02g39240 | SBH | 0.0 | 0.0 | 0.0 |
Nipponbare | IRGSP 1.0 | RAP-db | Os02g0604800 | SBH | None | None | None |
Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_02g0024100 | SBH | 0.0 | 0.0 | 0.0 |
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_02g0024270 | RBH | 0.0 | 0.0 | 0.0 |
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_02g0024250 | RBH | 0.0 | 0.0 | 0.0 |
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_02g0023890 | SBH | 0.0 | 0.0 | None |
PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_02g0023830 | SBH | 0.0 | 0.0 | 0.0 |
Minghui 63 | MH63RS3 | HZAU | OsMH63_02G0387000 | SBH | 0.0017715 | 0 | 0.000758 |
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_02g0023650 | SBH | 0.0 | 0.0 | 0.0 |
Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_02G0414700 | SBH | 0 | 0 | 0 |
LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_02g0023940 | SBH | 0.0 | 0.0 | None |
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_02g0023880 | SBH | 0.0 | 0.0 | None |
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_02g0024180 | SBH | 0.0 | 0.0 | None |
LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_02g0023950 | SBH | 0.0 | 0.0 | 0.0 |
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_02g0023650 | SBH | 0.0 | 0.0 | None |
N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_02G024070 | SBH | 0.0 | 0.0 | 0.133802 |
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_02g0023950 | SBH | 0.0 | 0.0 | 0.0 |