Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsZS97_02G0369300 | OGI:02060060 | 1/16 | Zhenshan 97 | ZS97RS3 | HZAU | Chr02:22168786-22170498 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | ATGAAGCAGCCGCTGCTGCTTGGCGCACATATCGGCCCGTACGCTTGCACTACACCGGTGCCCGCACTAGGTAAGATCCTCTTTGAGATTTCCTTATGGGACGAATCCTGCTGAGGAGTTTAGAACCATTTTAAGCCTCTTAATCATTTTATCTGCTCAAATCCTCTCTTTTGTTTGGAAGATCAATGTGGTTTATTTTTGCTATGTTGGAACAATTAAGCGAATGAAATCTACTTGTTGGTACTATGGCATTAACCTGCTGTTTGTACCGTTTTTATTTCTGGTTGAATCTTGTGATTTTGCTGAAATCTTATCACCTAACGTGAATGTATGCTTTCAGTCCATTCAGTTGAAAATCTATTTAATATCATTTTCTTTTTAGTCTTGGTAGCACGGTTGACAATAATTATCAGTCAGTCCTTGGTTTTGTGGTGATGAGTCGTGAGTCAAATAGCATCTATAAAAGGATTCTACCTAATAATTTTCAGAGTGATGCCCTGCTCTAATATTTACCCCCATTTTTTTTATCTCAGGTTTGACCTCTGTATTTCAGTGCCGTCTATAATTCATTAAGCTACTTTTGCTTACCCTTGTCTGTCTCTTTTCATTGCTGAAAGTTGATGTCTTTTTTAAGGCTAAGAAAGAGCTCATTCTATCTTCTGTAAATTTTACAGGCTCACTGAATGATGCCAAGATATATGACAAGGTATGGTCTCTAAGTGGCTTCCTGAATTTACAACTGAACCCTGTCCACATCTCTCCATTAACTGAGTCAGTCTAATGGGATAGAAGCACTACAATACTGTGTTGGTGATGGACGTCCTGCAGGCCCTGGTAAACAAGGCAATCTCAGCTGGCGCCATGTGCGGGATGGGAGGCAGGCTGCGGCCACCAGTGATTTCTTTGTATGCTGATGATGCAGTCCTCTTTTTCCGGCCAATGCAGCAAGATACGTGGGCAGTGAAAGCGATCCTTCAACTCTTTGGGGAGGCAACTAGTTTGAAGGCGAATTTTGCGAAGAGTGCAATCACAACAATCCGATGCTAAGAGGATCAGGCAATTTTGGTGCAGTCAATTCTGTGTTGTAGATTGGAGCCGTTCCCAATCACTTATCTGGGCCTGCCGCTTTCACTCCGGAAGCTCACGAAGCAAGATGTTCAGCCTTTGTTGGATCGGTTCTCTAAGAAGTTCGCCGGTTGGAAGCCTAAGTTCCTATCCGCTGGAGACCGTCTGACCTTGATCAAGTCGGTTCTGTTCGCTCTACCTGTTCATTACTTGTCGGTGCTCGAATTACCGCAGTCTGCGATCAAGGAGATTGATAGGAAGTGTCGGGGATTTCTATGGAAGGGACAGGAGGAGGTGAGTGGCGGGCATTGTTTAGTGGCATGGAAATCGGTCTGTATGCCATATGAAAAGGGCGGTTTGGGGATCAAAAACCTAAACTTCTTCGGCATGGCGTTACGGCTTAAATGGTTGGCAAAGAGAGGAGAGCATCGCGACAGACCTTGGACAACCATTGAGACTAAGCAGCCGAAGGAGTTACAGGACCTGTTCTTCTCAGCCACACGGCAAGTGTTGGGAGATGGGGGAAAACACAAAGTTTTGGCTTGCGGATTGGCTGCCAATTGGGAGCATAAAGGCGAGATTTCCGTTAATCTTCAGTCATGTGGAGCGCAAGGGTTTGACAGTGGCGAGAGGACTACAGAACCATAG
More
|
||||||||||
| CDS seq | ATGAAGCAGCCGCTGCTGCTTGGCGCACATATCGGCCCGTACGCTTGCACTACACCGGTGCCCGCACTAGGCTCACTGAATGATGCCAAGATATATGACAAGGCCCTGGTAAACAAGGCAATCTCAGCTGGCGCCATGTGCGGGATGGGAGGCAGGCTGCGGCCACCAGTGATTTCTTTGTATGCTGATGATGCAGTCCTCTTTTTCCGGCCAATGCAGCAAGATACATTGGAGCCGTTCCCAATCACTTATCTGGGCCTGCCGCTTTCACTCCGGAAGCTCACGAAGCAAGATGTTCAGCCTTTGTTGGATCGGTTCTCTAAGAAGTTCGCCGGTTGGAAGCCTAAGTTCCTATCCGCTGGAGACCGTCTGACCTTGATCAAGTCGGTTCTGTTCGCTCTACCTGTTCATTACTTGTCGGTGCTCGAATTACCGCAGTCTGCGATCAAGGAGATTGATAGGAAGTGTCGGGGATTTCTATGGAAGGGACAGGAGGAGGTGAGTGGCGGGCATTGTTTAGTGGCATGGAAATCGGTCTGTATGCCATATGAAAAGGGCGGTTTGGGGATCAAAAACCTAAACTTCTTCGGCATGGCGTTACGGCTTAAATGGTTGGCAAAGAGAGGAGAGCATCGCGACAGACCTTGGACAACCATTGAGACTAAGCAGCCGAAGGAGTTACAGGACCTGTTCTTCTCAGCCACACGGCAAGTGTTGGGAGATGGGGGAAAACACAAAGTTTTGGCTTGCGGATTGGCTGCCAATTGGGAGCATAAAGGCGAGATTTCCGTTAATCTTCAGTCATGTGGAGCGCAAGGGTTTGACAGTGGCGAGAGGACTACAGAACCATAG
More
|
||||||||||
| Protein seq | MKQPLLLGAHIGPYACTTPVPALGSLNDAKIYDKALVNKAISAGAMCGMGGRLRPPVISLYADDAVLFFRPMQQDTLEPFPITYLGLPLSLRKLTKQDVQPLLDRFSKKFAGWKPKFLSAGDRLTLIKSVLFALPVHYLSVLELPQSAIKEIDRKCRGFLWKGQEEVSGGHCLVAWKSVCMPYEKGGLGIKNLNFFGMALRLKWLAKRGEHRDRPWTTIETKQPKELQDLFFSATRQVLGDGGKHKVLACGLAANWEHKGEISVNLQSCGAQGFDSGERTTEP |
||||||||||
| Function | Putative ribonuclease H protein At1g65750 [UniProtKB/Swiss-Prot:P0C2F6] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsZS97_02G0369300 | OsZS97_02T0369300.1 | Chr02 | 22168786 | 22170498 | + | makerRMon | ||
| CDS seq | ATGAAGCAGCCGCTGCTGCTTGGCGCACATATCGGCCCGTACGCTTGCACTACACCGGTGCCCGCACTAGGCTCACTGAATGATGCCAAGATATATGACAAGGCCCTGGTAAACAAGGCAATCTCAGCTGGCGCCATGTGCGGGATGGGAGGCAGGCTGCGGCCACCAGTGATTTCTTTGTATGCTGATGATGCAGTCCTCTTTTTCCGGCCAATGCAGCAAGATACATTGGAGCCGTTCCCAATCACTTATCTGGGCCTGCCGCTTTCACTCCGGAAGCTCACGAAGCAAGATGTTCAGCCTTTGTTGGATCGGTTCTCTAAGAAGTTCGCCGGTTGGAAGCCTAAGTTCCTATCCGCTGGAGACCGTCTGACCTTGATCAAGTCGGTTCTGTTCGCTCTACCTGTTCATTACTTGTCGGTGCTCGAATTACCGCAGTCTGCGATCAAGGAGATTGATAGGAAGTGTCGGGGATTTCTATGGAAGGGACAGGAGGAGGTGAGTGGCGGGCATTGTTTAGTGGCATGGAAATCGGTCTGTATGCCATATGAAAAGGGCGGTTTGGGGATCAAAAACCTAAACTTCTTCGGCATGGCGTTACGGCTTAAATGGTTGGCAAAGAGAGGAGAGCATCGCGACAGACCTTGGACAACCATTGAGACTAAGCAGCCGAAGGAGTTACAGGACCTGTTCTTCTCAGCCACACGGCAAGTGTTGGGAGATGGGGGAAAACACAAAGTTTTGGCTTGCGGATTGGCTGCCAATTGGGAGCATAAAGGCGAGATTTCCGTTAATCTTCAGTCATGTGGAGCGCAAGGGTTTGACAGTGGCGAGAGGACTACAGAACCATAG
More
|
|||||||
| Protein seq | MKQPLLLGAHIGPYACTTPVPALGSLNDAKIYDKALVNKAISAGAMCGMGGRLRPPVISLYADDAVLFFRPMQQDTLEPFPITYLGLPLSLRKLTKQDVQPLLDRFSKKFAGWKPKFLSAGDRLTLIKSVLFALPVHYLSVLELPQSAIKEIDRKCRGFLWKGQEEVSGGHCLVAWKSVCMPYEKGGLGIKNLNFFGMALRLKWLAKRGEHRDRPWTTIETKQPKELQDLFFSATRQVLGDGGKHKVLACGLAANWEHKGEISVNLQSCGAQGFDSGERTTEP
More
|
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0 | 0 | 0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_02g0818601 | SBH | 0.000000 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os02g51200 | SBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os02g0818601 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_02g0020920 | SBH | 0.229109 | 0.0 | 1.512623 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_02g0021000 | SBH | 0.0 | 1.373643 | 0.000000 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_02g0020980 | SBH | 0.000000 | 0.0 | 0.974908 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_02g0020730 | SBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_02G0418200 | SBH | 0 | 0 | 0 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Zhenshan 97 | ZS97RS3 | HZAU | NA | NA | NA | NA | NA |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_02g0024860 | SBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_02g0020550 | SBH | 0.000000 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
