Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsZS97_02G0224500 | OGI:06043270 | 16/16 | Zhenshan 97 | ZS97RS3 | HZAU | Chr02:13453390-13454871 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | CTAATGTGTTCAATATACAGTATAATAGTAAAAACTGGTACTAAGAGTATTGTTGATCTGTCTCACAAAATAGCCGTATGAATGAAAAAATTACAAGCTCAATCACACAAGCGATAAAATTACTCACAGGTGAATCAAACTAGAAAAGAAAAAAAATGGTTCAATCAAAAATCTTTCTGGTGGCTTGCTGGATCTTGCTATAAGGATGAAGAGAGAGGTCTGTGTCTTGTGACTGGTAGTGGAGAGGACAACCAGGTGGCGAGCAGTAGTCGACGATGGAATCATGGAAGGATGTAGCGGTGTGGTCTAGAGATGAGCGACGCTGCGCATTAGCAGCCATCCATCATCTAGCAAGCAAAAAAAAATGCAAAAACATTCTCGTTCATGTCAATAGAGATGACGAGCAAAAGAAAAATAGCAAACATCCTCCATCACCGGCGGATTCCACTCTATCCTCTGTGGCCAGCCACATGGAGCACGATGTGCAAATGTAGGACCTGTGCAGCCCATCAATTAAGATCAGGTAATATTTGAGATTGCACGTTAATTTGATTTGCAAAAAAAATTAGGGCTTCATGCGTGAAGTTGAAGGAAAATATGCAGATGCAAATCATAGTATCATTTCCTTACTTGCTTGTTCTATCAATGTCGCCAATGTGGAGTAGCCGTTGGTTGTTGCTATTGGCCCAGGTGAACACCTCCTTGCTGGTTAAGGTGCTGCCTAGCGTCCAGCAGCGAGGGCTAAAGTAGTGCCATTGCCTCAACCGCCGCCGGCCACTGCCATCAACCGACACGGTGTCATCGTCCTCCTCCATGGTGTGTCGCCGATCCGTGGGCCGGGATGGTGGATTGATTCAGATCCGAAAAAAAAGGAAAAAAAATGAAGTGGGGGCGAGAGTGGTTGGTTGGGTATAGGAAAAATAGAATATACACCGGAAGTAGAGAAGTTATTTTTATCGAAGTAAATCATTTACTCCGATAATGGTAGGAGCACGATGCGGAACATGGGGTGGGATCGGAAGCACGGAAGTTGTTTTTATTATCGAAGTAAATCGTTTACTCGAAGAAAGGTGGGTGGTAGAGGCGCGCGATATGAGTAGATCTTTACTCCGACAACGGTAGGAGTGGGATGACGGGACATGGGGTGAGGTGGGCCTAGGCTAATGTATGTTTGGCGCTCAGAATAAATAGTAGTTCTAACAACTTTTAGCCCTCAGAATTTGTCCTAAAATATAAAAGAATTAATTATTGAAGGAGGTACTATTTTGGAAAGCTTACTTAAAAAATACGAAAGGTAGAGGATGAGAGAAGCGAGAAACGAACGCACCCACGTTGCTAAACAACCTAAAATTCTTAAATTTTGCTAAGGGCCGGTTTAGATCCCTAAAAAAAATTTTACACCCTGTTACATCGAACGTTTGAACACCTGCAACACTTGCATGAAGTATTAAATATAAACTTAAAAAAATAACTAATTACACA
More
|
||||||||||
| CDS seq | ATGGAGGAGGACGATGACACCGTGTCGGTTGATGGCAGTGGCCGGCGGCGGTTGAGGCAATGGCACTACTTTAGCCCTCGCTGCTGGACGCTAGGCAGCACCTTAACCAGCAAGGAGGTGTTCACCTGGGCCAATAGCAACAACCAACGGCTACTCCACATTGGCGACATTGATAGAACAAGCAAGTCCTACATTTGCACATCGTGCTCCATGTGGCTGGCCACAGAGGATAGAGTGGAATCCGCCGGTGATGGAGGATGTTTGCTATTTTTCTTTTGCTCGTCATCTCTATTGACATGA |
||||||||||
| Protein seq | MEEDDDTVSVDGSGRRRLRQWHYFSPRCWTLGSTLTSKEVFTWANSNNQRLLHIGDIDRTSKSYICTSCSMWLATEDRVESAGDGGCLLFFFCSSSLLT |
||||||||||
| Function | - | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsZS97_02G0224500 | OsZS97_02T0224500.1 | Chr02 | 13453390 | 13454871 | - | makerRMon | ||
| CDS seq | ATGGAGGAGGACGATGACACCGTGTCGGTTGATGGCAGTGGCCGGCGGCGGTTGAGGCAATGGCACTACTTTAGCCCTCGCTGCTGGACGCTAGGCAGCACCTTAACCAGCAAGGAGGTGTTCACCTGGGCCAATAGCAACAACCAACGGCTACTCCACATTGGCGACATTGATAGAACAAGCAAGTCCTACATTTGCACATCGTGCTCCATGTGGCTGGCCACAGAGGATAGAGTGGAATCCGCCGGTGATGGAGGATGTTTGCTATTTTTCTTTTGCTCGTCATCTCTATTGACATGA
More
|
|||||||
| Protein seq | MEEDDDTVSVDGSGRRRLRQWHYFSPRCWTLGSTLTSKEVFTWANSNNQRLLHIGDIDRTSKSYICTSCSMWLATEDRVESAGDGGCLLFFFCSSSLLT |
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.2135285 | 0.3695015 | 0.0573575 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os06g34770 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | NA | NA | NA | NA | NA |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_02g0014770 | RBH | 0.0 | 0.000000 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_02g0014950 | RBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_02g0014710 | RBH | 0.0 | 0.060619 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_02g0014690 | RBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_02G0212200 | RBH | 0.11315 | 0.3010025 | 0.087392 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_02g0014520 | RBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_11G0224700 | SBH | 0 | 0 | 0 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_02g0015050 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_02g0014630 | RBH | 0.255821 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_02g0015140 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_02g0014940 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_02g0014740 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_02G015080 | RBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_02g0014770 | RBH | 0.561668 | 0.0 | 0.000000 |
