Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsZS97_01G0679500 | OGI:01121160 | 16/16 | Zhenshan 97 | ZS97RS3 | HZAU | Chr01:42893561-42893884 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | TCATCCAGTTCCCCGCCGCCGCCTCCGCGTGTCATGGGCGCAGGTGAATCCTCCAACGGGCTCACGCTCGGCATGCACGGTATCGATCCTCGGTGGCGTCGCCTTCCTTGGCGTCGCAGGACGGTACAGTGTAGGGCGCGCGCGGCCACGTCGAGTCATGACATGAGCACGCCGACGCCTGGAGGGAGGCGGCCGGACTTCTTCTTGGTTGACGGAGATGCCCCGGAGGTAGATGCTGCTCGTCGAGGGGTTCATTGGTCCTGACCTTGGTCGTTGTAGGAGAGGATGCTGCTCACGTCGGACGGCGTTGGCGGACAGCGGCAT |
||||||||||
| CDS seq | ATGCCGCTGTCCGCCAACGCCGTCCGACGTGAGCAGCATCCTCTCCTACAACGACCAAGGTCAGGACCAATGAACCCCTCGACGAGCAGCATCTACCTCCGGGGCATCTCCGTCAACCAAGAAGAAGTCCGGCCGCCTCCCTCCAGGCGTCGGCGTGCTCATGTCATGACTCGACGTGGCCGCGCGCGCCCTACACTGTACCGTCCTGCGACGCCAAGGAAGGCGACGCCACCGAGGATCGATACCGTGCATGCCGAGCGTGAGCCCGTTGGAGGATTCACCTGCGCCCATGACACGCGGAGGCGGCGGCGGGGAACTGGATGA |
||||||||||
| Protein seq | MPLSANAVRREQHPLLQRPRSGPMNPSTSSIYLRGISVNQEEVRPPPSRRRRAHVMTRRGRARPTLYRPATPRKATPPRIDTVHAEREPVGGFTCAHDTRRRRRGTG |
||||||||||
| Function | - | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsZS97_01G0679500 | OsZS97_01T0679500.1 | Chr01 | 42893561 | 42893884 | - | makerRMon | ||
| CDS seq | ATGCCGCTGTCCGCCAACGCCGTCCGACGTGAGCAGCATCCTCTCCTACAACGACCAAGGTCAGGACCAATGAACCCCTCGACGAGCAGCATCTACCTCCGGGGCATCTCCGTCAACCAAGAAGAAGTCCGGCCGCCTCCCTCCAGGCGTCGGCGTGCTCATGTCATGACTCGACGTGGCCGCGCGCGCCCTACACTGTACCGTCCTGCGACGCCAAGGAAGGCGACGCCACCGAGGATCGATACCGTGCATGCCGAGCGTGAGCCCGTTGGAGGATTCACCTGCGCCCATGACACGCGGAGGCGGCGGCGGGGAACTGGATGA
More
|
|||||||
| Protein seq | MPLSANAVRREQHPLLQRPRSGPMNPSTSSIYLRGISVNQEEVRPPPSRRRRAHVMTRRGRARPTLYRPATPRKATPPRIDTVHAEREPVGGFTCAHDTRRRRRGTG |
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 4.178904 | 11.294774 | 7.0581095 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | MSU | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | RAP-db | NA | NA | NA | NA | NA |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_01g0046260 | RBH | 1.107277 | 12.062038 | 12.954419 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_01g0045790 | RBH | 0.037509 | 0.213069 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_01g0045370 | RBH | 3.504380 | 25.119926 | 12.713538 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_01G0677600 | RBH | 3.943325 | 11.04024 | 6.736808 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_01g0044910 | RBH | 0.162485 | 0.579616 | 1.814602 |
| Zhenshan 97 | ZS97RS3 | HZAU | NA | NA | NA | NA | NA |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_01g0045280 | RBH | 0.645667 | 21.360731 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_01g0045620 | RBH | 4.426317 | 44.989075 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_01G045690 | RBH | 0.621626 | 10.347487 | 6.488976 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_01g0045410 | RBH | 0.545134 | 13.890681 | 3.974428 |
