Basic Info

Gene ID OGI # | Score   Accession | Assembly | Annotation Location Links
OsZS97_01G0511100 OGI:01111130 | 3/16 Zhenshan 97 | ZS97RS3 | HZAU Chr01:32718001-32720724
Gene Symbol -
DNA seq

TTAGGCATAAAATTTCTTCAAAGAAATAGCATTCCAAGTATGCTTTAACTCTTCACCATCAAGATATGCTAACTTGAATGCTCCCGTTTCTGTCTTCTTTTTGACTATGAATGGTCCTTCCCACTTTGACTCGAGTTTTCCAACAGCTACCTCATTGAGCACTTTCTTCAAGACTAAATCTCCTTCTTCAATCGGCCTTGTCTTTACTTTTTGGTTGTAATAGCTCTTTGTTCCTTCTGTGTATGATGCCATCTTCTCCAAAGCTTCGACCCTTATTTCATCTAGCATTTCAAGAGTTATCTCTCTTCCTTCTTCATCTTTTTGGTCAAATATCATTCTTGGAGAATGTGCCCCTACTTCGCTTGGAGTCATTGCTTCATCGCCATAAACCAATCTAAAAGGGGTCATGCCAGTCGACCTTACTACCGTGGTTCTTAGTGCCCAAAGCACTGATAGCAAGTCCTCCGGCCATTTCCCTTTTGCTGATCCTTCTAACCTCTTCTTGATAGCTTCCGTGATTTTACCATTTGCCCTTTCCACAGCTCCATTTGTCTGAGGATGGCCTACAGAGGCAAAGTTGATTTGCAAATTAAGGCCTTTACACATGTCTTGAAATTTTCCAGATTCGAATTGCTTTCCATTGTCACATACTATTTCCTTTGGGATTCCAAATCGACATATTATGTTCTTCCAAACAAACTTTTGTACTGCTGCAGAAGTTATTCTTGCCACTGCTTCTGCCTCAATCCATCTTGAAAAGTATTCAATTGCAACAATGACAAAGCGCAGATCTCCCTTCGCTCTTGGAAGAGGACCTACTATATCTATTCCCCATCTGTAAAAAGGCCAGACTGGCGGAATTGGTTGCAGTTCTTTGGGTGGTGCTTTTGTCATTGGACCGAACTTCTGGCATGCTTTGCACGTCTTGATGTACTTCTCTGTATCTTTCATAATTGTTGGCCAATAGATTCCTTGTCTTATGACTTTTGAAGCCACTGACCGTGGTGCTTGATGAGCTCCACACAAGCCTTCATGTATTTCTACCACCATCTTCATGCCCTCTTCCCTTGTTACACACTTTAACAAAGGAGCAGTAACTCCACTTTTATACAACTGTCCCTCTACCACTTTGTATTTCTTGGACGTTAGTTGTATTCTCTTTGCTTCTTCTTCCTTTTCTGGAAGTTGTGCACTGACAAGGTATTTCAAGATCGGTTCTCTCCAATCTCCTTCTCTCTGTATGCATGCTACTTCTTTCTTTTCGTAACTTGGCTGGGTGATTATATCGAAAAATGAATTTTCCAATGGTTGACCTGTTGCGGCTGCCTTAGCTAGCTCATCAGCTTCTCCATTTTCTTCCCTTGTTATGGCTTTTACCGTTATTCCCAAGAAATGTTTCTCATTCAGCCTTGCTTCTTCCAGATATTTAGCCATAGTTTCCTCCTTTGCTTCAAAGGATTTGGAAAAGTGACCTGCTACCAACTTTGAGTCAGTTTTGACTATTAACCGCCGAGCCCCTAGCGCTCTTGCCTTTCTCATAGCCAACAAAACGCCTTCATACTCTGCTGTGTTGTTTGTTGAAGGAAAAGCTAATTGAACAGAATACTTCAACGTTTGCTTCATTGGTGTTTTCACAACTGCAGCGGCTCCTGCTCCGGCGGCATTGCATGCTCCATCGGAGAATGCTATCCATGGTTTTTCGACTTCTTCCTGTTGTTCTACCTCATTGGGAGTCCATTCTGCCACAAAATCTGCTAGTACTTGTGACTTTATGGCTGTTCTTGATATGTATTTCAGGTCAAAAGGTAAGAGTTCCATTGCCCATTTTGCTATTCTCCCCGCGACTTCCTTGTTTGTTAACACTTCTCCTATCGGGTATGCCGATGGTATTGTTACGTCATGCGATAGAAAATAATGCCTCAACTTTCTTGAAGCCATCACAATTGCATAAATCAACTTTTCTACTTCTGAGTATCGTGTTTTTGGTCCTTGTAATGCTTCTGAGACAAAGTATACCGGCACTTGCCTATTTTCTTCTTCTTGTACCAAAACTGCGCTAACTGTCGCTGGAGTTGCTGCCACATACATTAACAGAGGTTGACCTTTTGGTGGACTTGCTAATGTTGGCATTTCATGCAAGTATTTCTTCAAGTCATCGAAAGCTTGTTGGCATTCAGCAGTCCACTCGAAAGTGTTTGCCCCCCTCAAAGTCTTGAAGAAGGGTAATCCCTTTTCTGCTGATTTAGATAGAAATCTACTCAAAGATGCCATTCGGCCTGTCAACCTCTGCACTTCTCTTGTGTTTCTTGGCGGCTCCATTTGATGGATTGCTGCGATTTTGTCAGGATTTGCCTCTATTCCTCTTTTGGACACCAAGAAACCAAGTAACTTTCCTGCTCTAACGCCAAAAACACACTTTTCTGGATTAAGCTTAACTGAGCATTTTCTCAGGTTTTCAAATGTTTCTTGCAGATCTTTGCCATGGGTAAATGCTTGTTTACTCTTTACCACAATGTCATCTACGTATGCCTCGACATTCCGTCCTAACTGCTTAGCCAAGACTTTTCCTATGAGCCTGGCAAAAGTCGCTCCTGCATTCTTCAAACCAAATGGCATTCTGATAAAACAATAAGTTCCAAAAGGTGTTATAAATGATGTCTTTTCCTCATCCTCCTTTACCATAAAAACTTGGTGATAGCCAGAGTATGCGTCCAAGAAACTCAT

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CDS seq

ATGAGTTTCTTGGACGCATACTCTGGCTATCACCAAGTTTTTATGGTAAAGGAGGATGAGGAAAAGACATCATTTATAACACCTTTTGGAACTTATTGTTTTATCAGAATGCCATTTGGTTTGAAGAATGCAGGAGCGACTTTTGCCAGGCTCATAGGAAAAGTCTTGGCTAAGCAGTTAGGACGGAATGTCGAGGCATACGTAGATGACATTGTGGTAAAGAGTAAACAAGCATTTACCCATGGCAAAGATCTGCAAGAAACATTTGAAAACCTGAGAAAATGCTCAGTTAAGCTTAATCCAGAAAAGTGTGTTTTTGGCGTTAGAGCAGGAAAGTTACTTGGTTTCTTGGTGTCCAAAAGAGGAATAGAGGCAAATCCTGACAAAATCGCAGCAATCCATCAAATGGAGCCGCCAAGAAACACAAGAGAAGTGCAGAGGTTGACAGGCCGAATGGCATCTTTGAGTAGATTTCTATCTAAATCAGCAGAAAAGGGATTACCCTTCTTCAAGACTTTGAGGGGGGCAAACACTTTCGAGTGGACTGCTGAATGCCAACAAGCTTTCGATGACTTGAAGAAATACTTGCATGAAATGCCAACATTAGCAAGTCCACCAAAAGGTCAACCTCTGTTAATGTATGTGGCAGCAACTCCAGCGACAGTTAGCGCAGTTTTGGTACAAGAAGAAGAAAATAGGCAAGTGCCGGTATACTTTGTCTCAGAAGCATTACAAGGACCAAAAACACGATACTCAGAAGTAGAAAAGTTGATTTATGCAATTGTGATGGCTTCAAGAAAGTTGAGGCATTATTTTCTATCGCATGACGTAACAATACCATCGGCATACCCGATAGGAGAAGTGTTAACAAACAAGGAAGTCGCGGGGAGAATAGCAAAATGGGCAATGGAACTCTTACCTTTTGACCTGAAATACATATCAAGAACAGCCATAAAGTCACAAGTACTAGCAGATTTTGTGGCAGAATGGACTCCCAATGAGGTAGAACAACAGGAAGAAGTCGAAAAACCATGGATAGCATTCTCCGATGGAGCATGCAATGCCGCCGGAGCAGGAGCCGCTGCAGTTGTGAAAACACCAATGAAGCAAACGTTGAAGTATTCTGTTCAATTAGCTTTTCCTTCAACAAACAACACAGCAGAGTATGAAGGCGTTTTGTTGGCTATGAGAAAGGCAAGAGCGCTAGGGGCTCGGCGGTTAATAGTCAAAACTGACTCAAAGTTGGTAGCAGGTCACTTTTCCAAATCCTTTGAAGCAAAGGAGGAAACTATGGCTAAATATCTGGAAGAAGCAAGGCTGAATGAGAAACATTTCTTGGGAATAACGGTAAAAGCCATAACAAGGGAAGAAAATGGAGAAGCTGATGAGCTAGCTAAGGCAGCCGCAACAGGTCAACCATTGGAAAATTCATTTTTCGATATAATCACCCAGCCAAGTTACGAAAAGAAAGAAGTAGCATGCATACAGAGAGAAGGAGATTGGAGAGAACCGATCTTGAAATACCTTGTCAGTGCACAACTTCCAGAAAAGGAAGAAGAAGCAAAGAGAATACAACTAACGTCCAAGAAATACAAAGTGGTAGAGGGACAGTTGTATAAAAGTGGAGTTACTGCTCCTTTGTTAAAGTGTGTAACAAGGGAAGAGGGCATGAAGATGGTGGTAGAAATACATGAAGGCTTGTGTGGAGCTCATCAAGCACCACGGTCAGTGGCTTCAAAAGTCATAAGACAAGGAATCTATTGGCCAACAATTATGAAAGATACAGAGAAGTACATCAAGACGTGCAAAGCATGCCAGAAGTTCGGTCCAATGACAAAAGCACCACCCAAAGAACTGCAACCAATTCCGCCAGTCTGGCCTTTTTACAGATGGGGAATAGATATAGTAGGTCCTCTTCCAAGAGCGAAGGGAGATCTGCGCTTTGTCATTGTTGCAATTGAATACTTTTCAAGATGGATTGAGGCAGAAGCAGTGGCAAGAATAACTTCTGCAGCAGTACAAAAGTTTGTTTGGAAGAACATAATATGTCGATTTGGAATCCCAAAGGAAATAGTATGTGACAATGGAAAGCAATTCGAATCTGGAAAATTTCAAGACATGTGTAAAGGCCTTAATTTGCAAATCAACTTTGCCTCTGTAGGCCATCCTCAGACAAATGGAGCTGTGGAAAGGGCAAATGGTAAAATCACGGAAGCTATCAAGAAGAGGTTAGAAGGATCAGCAAAAGGGAAATGGCCGGAGGACTTGCTATCAGTGCTTTGGGCACTAAGAACCACGGTAGTAAGGTCGACTGGCATGACCCCTTTTAGATTGGTTTATGGCGATGAAGCAATGACTCCAAGCGAAGTAGGGGCACATTCTCCAAGAATGATATTTGACCAAAAAGATGAAGAAGGAAGAGAGATAACTCTTGAAATGCTAGATGAAATAAGGGTCGAAGCTTTGGAGAAGATGGCATCATACACAGAAGGAACAAAGAGCTATTACAACCAAAAAGTAAAGACAAGGCCGATTGAAGAAGGAGATTTAGTCTTGAAGAAAGTGCTCAATGAGGTAGCTGTTGGAAAACTCGAGTCAAAGTGGGAAGGACCATTCATAGTCAAAAAGAAGACAGAAACGGGAGCATTCAAGTTAGCATATCTTGATGGTGAAGAGTTAAAGCATACTTGGAATGCTATTTCTTTGAAGAAATTTTATGCCTAA

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Protein seq

MSFLDAYSGYHQVFMVKEDEEKTSFITPFGTYCFIRMPFGLKNAGATFARLIGKVLAKQLGRNVEAYVDDIVVKSKQAFTHGKDLQETFENLRKCSVKLNPEKCVFGVRAGKLLGFLVSKRGIEANPDKIAAIHQMEPPRNTREVQRLTGRMASLSRFLSKSAEKGLPFFKTLRGANTFEWTAECQQAFDDLKKYLHEMPTLASPPKGQPLLMYVAATPATVSAVLVQEEENRQVPVYFVSEALQGPKTRYSEVEKLIYAIVMASRKLRHYFLSHDVTIPSAYPIGEVLTNKEVAGRIAKWAMELLPFDLKYISRTAIKSQVLADFVAEWTPNEVEQQEEVEKPWIAFSDGACNAAGAGAAAVVKTPMKQTLKYSVQLAFPSTNNTAEYEGVLLAMRKARALGARRLIVKTDSKLVAGHFSKSFEAKEETMAKYLEEARLNEKHFLGITVKAITREENGEADELAKAAATGQPLENSFFDIITQPSYEKKEVACIQREGDWREPILKYLVSAQLPEKEEEAKRIQLTSKKYKVVEGQLYKSGVTAPLLKCVTREEGMKMVVEIHEGLCGAHQAPRSVASKVIRQGIYWPTIMKDTEKYIKTCKACQKFGPMTKAPPKELQPIPPVWPFYRWGIDIVGPLPRAKGDLRFVIVAIEYFSRWIEAEAVARITSAAVQKFVWKNIICRFGIPKEIVCDNGKQFESGKFQDMCKGLNLQINFASVGHPQTNGAVERANGKITEAIKKRLEGSAKGKWPEDLLSVLWALRTTVVRSTGMTPFRLVYGDEAMTPSEVGAHSPRMIFDQKDEEGREITLEMLDEIRVEALEKMASYTEGTKSYYNQKVKTRPIEEGDLVLKKVLNEVAVGKLESKWEGPFIVKKKTETGAFKLAYLDGEELKHTWNAISLKKFYA

Function Retrovirus-related Pol polyprotein from transposon opus [UniProtKB/Swiss-Prot:Q8I7P9]

Transcripts

Gene Transcript Chromosome Start End Strand Source
OsZS97_01G0511100 OsZS97_01T0511100.1 Chr01 32718001 32720724 - makerRMon
CDS seq

ATGAGTTTCTTGGACGCATACTCTGGCTATCACCAAGTTTTTATGGTAAAGGAGGATGAGGAAAAGACATCATTTATAACACCTTTTGGAACTTATTGTTTTATCAGAATGCCATTTGGTTTGAAGAATGCAGGAGCGACTTTTGCCAGGCTCATAGGAAAAGTCTTGGCTAAGCAGTTAGGACGGAATGTCGAGGCATACGTAGATGACATTGTGGTAAAGAGTAAACAAGCATTTACCCATGGCAAAGATCTGCAAGAAACATTTGAAAACCTGAGAAAATGCTCAGTTAAGCTTAATCCAGAAAAGTGTGTTTTTGGCGTTAGAGCAGGAAAGTTACTTGGTTTCTTGGTGTCCAAAAGAGGAATAGAGGCAAATCCTGACAAAATCGCAGCAATCCATCAAATGGAGCCGCCAAGAAACACAAGAGAAGTGCAGAGGTTGACAGGCCGAATGGCATCTTTGAGTAGATTTCTATCTAAATCAGCAGAAAAGGGATTACCCTTCTTCAAGACTTTGAGGGGGGCAAACACTTTCGAGTGGACTGCTGAATGCCAACAAGCTTTCGATGACTTGAAGAAATACTTGCATGAAATGCCAACATTAGCAAGTCCACCAAAAGGTCAACCTCTGTTAATGTATGTGGCAGCAACTCCAGCGACAGTTAGCGCAGTTTTGGTACAAGAAGAAGAAAATAGGCAAGTGCCGGTATACTTTGTCTCAGAAGCATTACAAGGACCAAAAACACGATACTCAGAAGTAGAAAAGTTGATTTATGCAATTGTGATGGCTTCAAGAAAGTTGAGGCATTATTTTCTATCGCATGACGTAACAATACCATCGGCATACCCGATAGGAGAAGTGTTAACAAACAAGGAAGTCGCGGGGAGAATAGCAAAATGGGCAATGGAACTCTTACCTTTTGACCTGAAATACATATCAAGAACAGCCATAAAGTCACAAGTACTAGCAGATTTTGTGGCAGAATGGACTCCCAATGAGGTAGAACAACAGGAAGAAGTCGAAAAACCATGGATAGCATTCTCCGATGGAGCATGCAATGCCGCCGGAGCAGGAGCCGCTGCAGTTGTGAAAACACCAATGAAGCAAACGTTGAAGTATTCTGTTCAATTAGCTTTTCCTTCAACAAACAACACAGCAGAGTATGAAGGCGTTTTGTTGGCTATGAGAAAGGCAAGAGCGCTAGGGGCTCGGCGGTTAATAGTCAAAACTGACTCAAAGTTGGTAGCAGGTCACTTTTCCAAATCCTTTGAAGCAAAGGAGGAAACTATGGCTAAATATCTGGAAGAAGCAAGGCTGAATGAGAAACATTTCTTGGGAATAACGGTAAAAGCCATAACAAGGGAAGAAAATGGAGAAGCTGATGAGCTAGCTAAGGCAGCCGCAACAGGTCAACCATTGGAAAATTCATTTTTCGATATAATCACCCAGCCAAGTTACGAAAAGAAAGAAGTAGCATGCATACAGAGAGAAGGAGATTGGAGAGAACCGATCTTGAAATACCTTGTCAGTGCACAACTTCCAGAAAAGGAAGAAGAAGCAAAGAGAATACAACTAACGTCCAAGAAATACAAAGTGGTAGAGGGACAGTTGTATAAAAGTGGAGTTACTGCTCCTTTGTTAAAGTGTGTAACAAGGGAAGAGGGCATGAAGATGGTGGTAGAAATACATGAAGGCTTGTGTGGAGCTCATCAAGCACCACGGTCAGTGGCTTCAAAAGTCATAAGACAAGGAATCTATTGGCCAACAATTATGAAAGATACAGAGAAGTACATCAAGACGTGCAAAGCATGCCAGAAGTTCGGTCCAATGACAAAAGCACCACCCAAAGAACTGCAACCAATTCCGCCAGTCTGGCCTTTTTACAGATGGGGAATAGATATAGTAGGTCCTCTTCCAAGAGCGAAGGGAGATCTGCGCTTTGTCATTGTTGCAATTGAATACTTTTCAAGATGGATTGAGGCAGAAGCAGTGGCAAGAATAACTTCTGCAGCAGTACAAAAGTTTGTTTGGAAGAACATAATATGTCGATTTGGAATCCCAAAGGAAATAGTATGTGACAATGGAAAGCAATTCGAATCTGGAAAATTTCAAGACATGTGTAAAGGCCTTAATTTGCAAATCAACTTTGCCTCTGTAGGCCATCCTCAGACAAATGGAGCTGTGGAAAGGGCAAATGGTAAAATCACGGAAGCTATCAAGAAGAGGTTAGAAGGATCAGCAAAAGGGAAATGGCCGGAGGACTTGCTATCAGTGCTTTGGGCACTAAGAACCACGGTAGTAAGGTCGACTGGCATGACCCCTTTTAGATTGGTTTATGGCGATGAAGCAATGACTCCAAGCGAAGTAGGGGCACATTCTCCAAGAATGATATTTGACCAAAAAGATGAAGAAGGAAGAGAGATAACTCTTGAAATGCTAGATGAAATAAGGGTCGAAGCTTTGGAGAAGATGGCATCATACACAGAAGGAACAAAGAGCTATTACAACCAAAAAGTAAAGACAAGGCCGATTGAAGAAGGAGATTTAGTCTTGAAGAAAGTGCTCAATGAGGTAGCTGTTGGAAAACTCGAGTCAAAGTGGGAAGGACCATTCATAGTCAAAAAGAAGACAGAAACGGGAGCATTCAAGTTAGCATATCTTGATGGTGAAGAGTTAAAGCATACTTGGAATGCTATTTCTTTGAAGAAATTTTATGCCTAA

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Protein seq

MSFLDAYSGYHQVFMVKEDEEKTSFITPFGTYCFIRMPFGLKNAGATFARLIGKVLAKQLGRNVEAYVDDIVVKSKQAFTHGKDLQETFENLRKCSVKLNPEKCVFGVRAGKLLGFLVSKRGIEANPDKIAAIHQMEPPRNTREVQRLTGRMASLSRFLSKSAEKGLPFFKTLRGANTFEWTAECQQAFDDLKKYLHEMPTLASPPKGQPLLMYVAATPATVSAVLVQEEENRQVPVYFVSEALQGPKTRYSEVEKLIYAIVMASRKLRHYFLSHDVTIPSAYPIGEVLTNKEVAGRIAKWAMELLPFDLKYISRTAIKSQVLADFVAEWTPNEVEQQEEVEKPWIAFSDGACNAAGAGAAAVVKTPMKQTLKYSVQLAFPSTNNTAEYEGVLLAMRKARALGARRLIVKTDSKLVAGHFSKSFEAKEETMAKYLEEARLNEKHFLGITVKAITREENGEADELAKAAATGQPLENSFFDIITQPSYEKKEVACIQREGDWREPILKYLVSAQLPEKEEEAKRIQLTSKKYKVVEGQLYKSGVTAPLLKCVTREEGMKMVVEIHEGLCGAHQAPRSVASKVIRQGIYWPTIMKDTEKYIKTCKACQKFGPMTKAPPKELQPIPPVWPFYRWGIDIVGPLPRAKGDLRFVIVAIEYFSRWIEAEAVARITSAAVQKFVWKNIICRFGIPKEIVCDNGKQFESGKFQDMCKGLNLQINFASVGHPQTNGAVERANGKITEAIKKRLEGSAKGKWPEDLLSVLWALRTTVVRSTGMTPFRLVYGDEAMTPSEVGAHSPRMIFDQKDEEGREITLEMLDEIRVEALEKMASYTEGTKSYYNQKVKTRPIEEGDLVLKKVLNEVAVGKLESKWEGPFIVKKKTETGAFKLAYLDGEELKHTWNAISLKKFYA

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Event Type Chromosome Start End Strand Alternative mRNAs Total mRNAs Source

Expression

Leaf Root Panicle
FPKM 0.0028995 0 0

Homologues

Genome & Annotation Homologs Type Expression(FPKM)
Leaf Root Panicle
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) NA NA NA NA NA
Nipponbare | IRGSP 1.0 | MSU LOC_Os01g66090 RBH 0.0 0.006963 0.011373
Nipponbare | IRGSP 1.0 | RAP-db NA NA NA NA NA
Azucena | AzucenaRS1 | Gramene(+IsoSeq) OsAzu_01g0034311 SBH 0.043118 2.382331 1.872674
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) OsKeNa_01g0033831 SBH 0.076553 2.436650 1.151488
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) NA NA NA NA NA
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) NA NA NA NA NA
PR 106 | Os127742RS1 | Gramene(+IsoSeq) NA NA NA NA NA
Minghui 63 | MH63RS3 | HZAU OsMH63_01G0616100 SBH 0.007087 0.009413 0.002382
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) OsIR64_01g0033031 SBH 0.043880 0.160660 0.697742
Zhenshan 97 | ZS97RS3 | HZAU OsZS97_05G0411600 RBH 0 0.003555 0
LIMA | Os127564RS1 | Gramene(+IsoSeq) NA NA NA NA NA
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) NA NA NA NA NA
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) NA NA NA NA NA
LIU XU | Os125827RS1 | Gramene(+IsoSeq) NA NA NA NA NA
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) NA NA NA NA NA
N22 | OsN22RS2 | Gramene(+IsoSeq) NA NA NA NA NA
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) NA NA NA NA NA
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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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