Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsZS97_01G0476400 | OGI:01088290 | 16/16 | Zhenshan 97 | ZS97RS3 | HZAU | Chr01:30774760-30777990 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | CGAGAAACAATGATAAAGGGCTCAGATCACCTGCCCAAAACATATCAGTATTGCAAATTCCAGACAAAAAGACGCAATTGTCAAGTGTAAGGGCATGACCAAAAAACACTAACATCTAGCGGCGGAGAACTAATTCTTCATAAAGATGAGTTAGTCCGATGACAGTGCCTCATGATCCAAACAAAAGAGGCTTGTTGCTGGAACCCATGTCTGATTTTTCTAAAGTAGCCAGATGCATGTCAGTGTACATCACTAACTCCAATATTAAGACGAGCATATGAAGAAATTACTTCTCCAAGTCTCCAACCGTCTACCCTACACAGCATCATGCAGCTTGACTAAGGGATAAGTTTTACAAAAGTTTATAGGAACCCTAGTACCTCCAGACCCTCCATAGCGGATTTACAGCCTGTACTGGCCCTAAGTAAAGGGCCAGAACAAAGGCCTTCTTGATTTGATACAGGCAAAAGGGGCTTCTGAAACATGCTTTCAGTCCGATGATTCTCCAAGCTTTTTAATGGCATCCTCTATTGCTGGCACAGAATCACGAAATGCTTCCCACTGCTCAACTGTCAAACTTATCCCTGCAATTCAGCAGCGTGGCAAAATAAGAAATGAAGCACATGAAATCAAACATATCAACACACACGCAAAGGTACAGTTACGTCATGAAAGTAAAACAAAACTGCATTGCATTAGCACCACTACACAAAGAATGCCTGTGAAGAGGATGCAATAGGCACAAAGCAAACTGAAAATGAACTTTTTCATCTTTGGTGGTAAAATAAAAAACATGGTACAAAGGCTCATCCTTTAGGAAGGAAGGTGTCCCAAGTGAAACAATTGTCAGATGTTAGACTTCAATATAAGGATTTGTGATAAAAGTACAATCTGAGGGGTGATGTCGTATTCCAAACATTATAAATCAACACACTATTAGGATCCTGTGTACAGGCTATGGAGTAACTGTGACTCTTTTCTTTTATCTTTCGCTTATGCCTAAGATTGTAGTATAGCTTCATAAGGTTGGGAGATACTTTTGAGGATCAGCTAGACATCTAAGCTTAAATGTTCCTCCCATAAAACTAAATTTGGACAACAATATAAATAGAGCTGGGTAGCTGTTGCATAAGATTTAATCACATTGCACCTATTCAAATATCCTATAAACTAGTTAGAACCTGACATCATATTTAACTTTTTCAGCAACTACGTTCAGCTGGACTAAACAAATAATAAGAAAACAAACTGCACAACAACTTCCAAACCACACTAAAGACTTAGATGGTGCAAACCCAAGGTAAAATAGATATCCTAGTACTACCAATATGAATCATCTAAGAGTAAAGACAAGAAGTCAAATTGGTAACAACAACTTGTAAGCCATAACAGGGACTGTACGATAAATATTTGCAGAATTGGCAAATGGAGAATCCTAACCATAATCAAGCAGTTACAAATTGGCAATAGCACAGATCTACAAAAATAGTGTCGCTGACACAATCAAAGTATGATGGCAAATGACAACAGACAAGTGACAGGTCGGCCTCACTCAAGATTGATATTAGCAAGTACAATAGAAAAAACTAGGGAAATTTGCACGAAGTTAATATTTTTAGGACTGATAAGCTGGAAGAATATTTTCATACCCAATTCACAATTCCCTATATTCTTATCATCACCCCTTTGTCTTTAAGCAACTCACCCTTGATCCTTATAACAACACTGGAATATAAACAATAGCTCATACATGCGCAAAACAAAACCTAGGTATGCTCCGTGACATTTGAGAGTGTGATCAAATAGACCAAGAAAGAAGAGGATAGATAAGCACAGAAAACACATCAAAATATTAAACAGATCGAGCTATCAGAGAATTTACAGTTATGATGCAATTCGATTATACAGATGTCAGAATTGGTAGAGTGTAATATTTCCTCTGAGGTCTAAACAAAATCTAACCCAACTGACTTGCAGCAGTCCCACCCATAATAAAACTGGTAAAGTTCGAGATATATGTGTAATATTAAGGTGCATTTTAACCGAACAGTTCTAAGACAAGTCCTCTATTATAATAGCAGAAATCCAATGTTTCAGCTAACAAATCAGGAATATGTGCATCACCTTTGGCGGGCAGCTCCTTGCCGTCCTTGAAGTAGTACTCTCGGATGGACAGAAGCGTCTTGCCCTTGAACTCCTGAAGAGTCACCCTCCTCCTGGCCGAAAGCTGCAAAAGCAAACCTCATCACACCGATTCCCACCGCGAAATCTAGCGAAACAAAGGAGTATCAGCGATTTCACGCGAGGGGAAGAACTCACGCGGCAGAGGATGAGGTCTCCCTCGTCATCGTACTCCCTCTTCGTTCCACCTCCCCGCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCTTCCTCCTCGGCCTGTTCGTCCTTCCCCTCCTCGCCGGCGCCGCCGGCCTGCTCCTGCTGCTGCTCCTGCTCATCCTCCTGGGAGAGGGACTCGAGGTACCCCTCGACGACGCGGCGGACGAAGCGCTTGCGGTCGGGGATGGAGAGGTCGATGCCGAGGCGGTCGGCGGCGGCGGTGCGGACCTTGAACTCCGTGAGGGACTCCATGTCGGAGCCCCGGAGGATCTCCAGAACCGTGGACTCCACCTTCTTCTGCGTCTCCTCGTCCATGCCGGCCGCCGGTGGGGCGCTGGCGGAAGGCGGCGATGCTTCGGCTTCCCTCGCCGGCTTTCTCCCCACTCTGTCGAACTCCTAACCGCTGTACAGCGCCGCCTGCGTCGATGGGGGTAGGGGAAGAGGACGAGACTCCTGGGCTATCCGGCCCGACATATTCGGCGCTAAGGAATAAGTTCACCGGAGGTCCCCCAACTTAACAGCGAGATTTTTTTAAAGTTCCTTAACTAAAAAACCAGAAATCTCCACCTCTAAACTATACAAAACCGTTCAAAAGATATCAGTATAGTGGGCTGGTTTCGCTGACGTGACATCCTAGTCAGCACAAATAATAAAATAAATATGTGGGGCCCACATATAAGTGACCCACATTTTTCTGTTGTTCTTTTTTCTTCTCCGGGCGTGGGCGGAGGCAGGCGGAGCGGCTGCGAGGGCAAGCGGCGGGCGAGCGCGGCTTGCGGCGGGAAGCGCGGCTGCTAGGGCGGGCGTCGGCGAGTGCGGCTGCAGCGGCAAGCGGAGGCGGTCGACGTGACGAGGCGGCGGGAGAGGAGG
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| CDS seq | ATGGACGAGGAGACGCAGAAGAAGGTGGAGTCCACGGTTCTGGAGATCCTCCGGGGCTCCGACATGGAGTCCCTCACGGAGTTCAAGGTCCGCACCGCCGCCGCCGACCGCCTCGGCATCGACCTCTCCATCCCCGACCGCAAGCGCTTCGTCCGCCGCGTCGTCGAGGGGTACCTCGAGTCCCTCTCCCAGGAGGATGAGCAGGAGCAGCAGCAGGAGCAGGCCGGCGGCGCCGGCGAGGAGGGGAAGGACGAACAGGCCGAGGAGGAAGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGCGGGGAGGTGGAACGAAGAGGGAGTACGATGACGAGGGAGACCTCATCCTCTGCCGCGTGAGTTCTTCCCCTCGCGTGAAATCGCTGATACTCCTTTGTTTCGCTAGATTTCGCGGTGGGAATCGGTGTGATGAGGTTTGCTTTTGCAGCTTTCGGCCAGGAGGAGGGTGA
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| Protein seq | MDEETQKKVESTVLEILRGSDMESLTEFKVRTAAADRLGIDLSIPDRKRFVRRVVEGYLESLSQEDEQEQQQEQAGGAGEEGKDEQAEEEEEEEEEEEEERGGGTKREYDDEGDLILCRVSSSPRVKSLILLCFARFRGGNRCDEVCFCSFRPGGG |
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| Function | RNA polymerase II transcriptional coactivator KELP [UniProtKB/Swiss-Prot:O65155] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsZS97_01G0476400 | OsZS97_01T0476400.1 | Chr01 | 30774760 | 30777990 | - | makerRMon | ||
| CDS seq | ATGGACGAGGAGACGCAGAAGAAGGTGGAGTCCACGGTTCTGGAGATCCTCCGGGGCTCCGACATGGAGTCCCTCACGGAGTTCAAGGTCCGCACCGCCGCCGCCGACCGCCTCGGCATCGACCTCTCCATCCCCGACCGCAAGCGCTTCGTCCGCCGCGTCGTCGAGGGGTACCTCGAGTCCCTCTCCCAGGAGGATGAGCAGGAGCAGCAGCAGGAGCAGGCCGGCGGCGCCGGCGAGGAGGGGAAGGACGAACAGGCCGAGGAGGAAGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGCGGGGAGGTGGAACGAAGAGGGAGTACGATGACGAGGGAGACCTCATCCTCTGCCGCGTGAGTTCTTCCCCTCGCGTGAAATCGCTGATACTCCTTTGTTTCGCTAGATTTCGCGGTGGGAATCGGTGTGATGAGGTTTGCTTTTGCAGCTTTCGGCCAGGAGGAGGGTGA
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| Protein seq | MDEETQKKVESTVLEILRGSDMESLTEFKVRTAAADRLGIDLSIPDRKRFVRRVVEGYLESLSQEDEQEQQQEQAGGAGEEGKDEQAEEEEEEEEEEEEERGGGTKREYDDEGDLILCRVSSSPRVKSLILLCFARFRGGNRCDEVCFCSFRPGGG |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 6.1921965 | 5.754961 | 13.9506005 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_01g0706000 | RBH | 0.529266 | 0.000000 | 7.289226 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os01g50960 | RBH | 0.356978 | 0.000000 | 1.653939 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os01g0706000 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_01g0030760 | RBH | 1.390235 | 6.796637 | 4.311229 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_01g0030360 | RBH | 0.000000 | 2.382341 | 0.557764 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_01g0030730 | RBH | 1.451967 | 15.288726 | 5.602954 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_01g0030020 | RBH | 0.085590 | 0.305145 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_01g0029670 | RBH | 6.717556 | 16.486475 | 6.915696 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_01G0485100 | RBH | 6.9002435 | 10.163532 | 27.3495025 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_01g0029400 | RBH | 0.205840 | 1.542284 | 0.475161 |
| Zhenshan 97 | ZS97RS3 | HZAU | NA | NA | NA | NA | NA |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_01g0029640 | RBH | 0.144973 | 0.235595 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_01g0029600 | RBH | 0.000000 | 10.590839 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_01g0029870 | RBH | 0.0 | 27.559851 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_01g0030030 | RBH | 1.101893 | 0.817840 | 1.987475 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_01g0029820 | RBH | 0.000000 | 3.598620 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_01G030280 | RBH | 0.197295 | 5.223149 | 1.624464 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_01g0029970 | RBH | 0.000000 | 17.311272 | 3.405422 |
