Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsZS97_01G0382300 | OGI:01073310 | 16/16 | Zhenshan 97 | ZS97RS3 | HZAU | Chr01:24926960-24929426 | ||||||||
| Gene Symbol | OsFbox028, OsFbox28, Os_F0158 | ||||||||||
| DNA seq | AGGAACTCTTTATCAGGGAAACTACCAACTTAACAGATTTTGCAACAGAGGTATTATATGTGCTTGCTCTTCAGAACAATTCTATGGAGTATCTAGCAGACTGGCACCATTCCAACATCAATATGTAAAATGCAACACATCCGAAACCGAAAGCTAGACTTATCAAACAACATGCTTACAGGAGAGGTTCCATCTGGCGGTCAGCAGGGAGATTTTGAACAACTTCAAATTGAGACACGATTGTGGATTTTGGCCCAAAACAATACGCACCAAAGTTTTAGTACTTCCGCAACCCAGAACCTAACAACTAGTACTAAATTAGCATCCAGAGTTCACCGTTAATTTCTGAAGAATTTAGTATGTCAGTGCTACATCCATAGATTTGTGAACCCATCTATGTCGGATGACAAAAACACCATAAACGCACAGACCCATCAGCTCTCCACGGCGTAGAAGAAGGGATCGTCGAGAGACAGATCAATGGCGCTCTGGAAGCTCCAGCGATCTTGGACGAGGTTCTTGGGAAACATCAGCTCGATCTCCGCCGCCTCGTCGTCCTTGGCGGCGAAGCACACTTTATCCTCGCAGAAGAAGGCCACGGTCTCGAGCACCTCCCCCTCCAAGATGAGGTACTTGAGGCACAACACCTCATAGCGCTCGGTGTGGAACCCTTGGATGCTGACTGTCTTGAGATGCGACTTGAGGCATTCGCAGGAACCCAGGGATTCCCAAACATCCGCGCAATTCGCGATTTCAGGTGATGCGCATGGAGGAATGGACTGCAATTTAGCAAAGCAACAATCAGAACTTTGCTTAGCTTATCAATCAGGAAAGCTATCATATCAACCAGAAGTAATGAACATTGCAAATCAACTACACGATGCAAATTAACAGAATAACATGGTACTACTATCTAATTATATTCTCGATCTAATCTAGAATTGGTATTTGACTAGTAGAAGAATTCAGTGGAAGTAAGCTTGCAGGTGCTAACCGCGTGTACTAAAACAACAACTACCTTGATGTGAAGAGTCTCGAGGTGAGGGAAGCATTTGAGCAGCGTCATCAGCAGCTTGATCTCCCGTTCGATCGCCAAACACACCTTGACAGCAAGTATCTTCAAGCTCGGGAGCTTGGCGCTAGACTTCACAAACATCCACATCCCAGGCTGCCATTTCATTCCCAATACAACAAATCAAACAACAGAGAGGAAATTGTTTGGTTGCAGAATCACGAACTGAATTGCAAAGTGCAGAGCACAACAGTTTGGAGATATACCCTGATGGTGGTGCCGCCAATCTGGAGCTCGTGGAGCTGGAGGTCCAGGATGCCGAGCACCTCCAGCCTTGGCGCGCTTACGATCTTGATGGGCGTACGCTCGGCGACGGGGATGGCGTGGTGGAGGAGCAGCCGCTCCAGGCATGGCGCGCCGTCGACGACAATCTCGTCGAGGCTGGACATCCACTCCACCGCGGCCCGGAGGCTTGGGGACTTGATGCGGAGCCGCGACGGGCAGTTGTACGACATGGCGAGGGAGAGCACCTCCAGCTTACTGCAGAGCGAGAGCAGGGCGTCGAAGTCTCGGTCGGGGATGATGCAGTGGAAGAGGCCGAGCTCGCGGAGGTTTACTAAGGCGGCAGCGGCGACTTCGGGGAACATCCATGCGCCGAGGTACAGCCGCCGGAGGTAGGCGCAGCGGAAGATGTCGTCGGGGAGCGGCATGTTGAGCGGCCACGGGCGGTTGAAGAGGATGAGGTCCTCGACGTTTTTGTCGGCCAGGCTCGCCACGAGGCGCCGGAGCGCGTACTCGTGGTGGTAGAAGGCGACGTGGGTGATGCGCGCGGCGCGGACGGGGCCCGGGTGCGCGTCCACGCAGCGGGAGATGGCGCGGACGAGGGAGACCTCGTTGTCGGCGTCCCTGAGGTGCGCGTCGTCGACGAGGAGGGAGGTCTTCGCCCACACGCGGCGCCAGCGCGTGGACAGCGCCATGGTGCGCGCGGCTTCCTTGGTGGAGAGGCGGGGGATGATCTCCGAGAGGAGGTCGTCCGCGAGGCGGCTGATGTGGTCCTCCTCGCCATCCCCCGGCGGCGGCGACGGGAAGGAGCGGGCGTCTTCGGCGGCGGAGTAGTCGTCGGACGAGGTGAAGGAGAAGTGGTCGTCCTCGGAGTCGTCGGCGGAGGCGGCGTCGGGCGGCGCGGGGACGAAGGGCGCGGGGAGGAGGGAGATGAGGTAGGGGATGATGCAGTCGATGTGCTCCTGCGCCGGCGGGTCCTGCAAGGAGTTGAAGTAGTCCACCACTTCCCCGTAGGTCATGCCCCCTTCCTCGCCGGCGGCATCCATGGCGACGGCGGCGGCGGGCGGGAAGGCGAGGCGAGGCGAGTTTGGGAGAGGAGGAAACGGAAGCGAGGGTCTTTTTCTTTTCTTTTTTTTTTTTTTTGCGTTTTGAATTCCGCTGCTCTCACGAGTC
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| CDS seq | ATGGATGCCGCCGGCGAGGAAGGGGGCATGACCTACGGGGAAGTGGTGGACTACTTCAACTCCTTGCAGGACCCGCCGGCGCAGGAGCACATCGACTGCATCATCCCCTACCTCATCTCCCTCCTCCCCGCGCCCTTCGTCCCCGCGCCGCCCGACGCCGCCTCCGCCGACGACTCCGAGGACGACCACTTCTCCTTCACCTCGTCCGACGACTACTCCGCCGCCGAAGACGCCCGCTCCTTCCCGTCGCCGCCGCCGGGGGATGGCGAGGAGGACCACATCAGCCGCCTCGCGGACGACCTCCTCTCGGAGATCATCCCCCGCCTCTCCACCAAGGAAGCCGCGCGCACCATGGCGCTGTCCACGCGCTGGCGCCGCGTGTGGGCGAAGACCTCCCTCCTCGTCGACGACGCGCACCTCAGGGACGCCGACAACGAGGTCTCCCTCGTCCGCGCCATCTCCCGCTGCGTGGACGCGCACCCGGGCCCCGTCCGCGCCGCGCGCATCACCCACGTCGCCTTCTACCACCACGAGTACGCGCTCCGGCGCCTCGTGGCGAGCCTGGCCGACAAAAACGTCGAGGACCTCATCCTCTTCAACCGCCCGTGGCCGCTCAACATGCCGCTCCCCGACGACATCTTCCGCTGCGCCTACCTCCGGCGGCTGTACCTCGGCGCATGGATGTTCCCCGAAGTCGCCGCTGCCGCCTTAGTAAACCTCCGCGAGCTCGGCCTCTTCCACTGCATCATCCCCGACCGAGACTTCGACGCCCTGCTCTCGCTCTGCAGTAAGCTGGAGGTGCTCTCCCTCGCCATGTCGTACAACTGCCCGTCGCGGCTCCGCATCAAGTCCCCAAGCCTCCGGGCCGCGGTGGAGTGGATGTCCAGCCTCGACGAGATTGTCGTCGACGGCGCGCCATGCCTGGAGCGGCTGCTCCTCCACCACGCCATCCCCGTCGCCGAGCGTACGCCCATCAAGATCGTAAGCGCGCCAAGGCTGGAGGTGCTCGGCATCCTGGACCTCCAGCTCCACGAGCTCCAGATTGGCGGCACCACCATCAGGCCTGGGATGTGGATGTTTGTGAAGTCTAGCGCCAAGCTCCCGAGCTTGAAGATACTTGCTGTCAAGGTGTGTTTGGCGATCGAACGGGAGATCAAGCTGCTGATGACGCTGCTCAAATGCTTCCCTCACCTCGAGACTCTTCACATCAAGTCCATTCCTCCATGCGCATCACCTGAAATCGCGAATTGCGCGGATGTTTGGGAATCCCTGGGTTCCTGCGAATGCCTCAAGTCGCATCTCAAGACAGTCAGCATCCAAGGGTTCCACACCGAGCGCTATGAGGTGTTGTGCCTCAAGTACCTCATCTTGGAGGGGGAGGTGCTCGAGACCGTGGCCTTCTTCTGCGAGGATAAAGTGTGCTTCGCCGCCAAGGACGACGAGGCGGCGGAGATCGAGCTGATGTTTCCCAAGAACCTCGTCCAAGATCGCTGGAGCTTCCAGAGCGCCATTGATCTGTCTCTCGACGATCCCTTCTTCTACGCCGTGGAGAGCTGA
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| Protein seq | MDAAGEEGGMTYGEVVDYFNSLQDPPAQEHIDCIIPYLISLLPAPFVPAPPDAASADDSEDDHFSFTSSDDYSAAEDARSFPSPPPGDGEEDHISRLADDLLSEIIPRLSTKEAARTMALSTRWRRVWAKTSLLVDDAHLRDADNEVSLVRAISRCVDAHPGPVRAARITHVAFYHHEYALRRLVASLADKNVEDLILFNRPWPLNMPLPDDIFRCAYLRRLYLGAWMFPEVAAAALVNLRELGLFHCIIPDRDFDALLSLCSKLEVLSLAMSYNCPSRLRIKSPSLRAAVEWMSSLDEIVVDGAPCLERLLLHHAIPVAERTPIKIVSAPRLEVLGILDLQLHELQIGGTTIRPGMWMFVKSSAKLPSLKILAVKVCLAIEREIKLLMTLLKCFPHLETLHIKSIPPCASPEIANCADVWESLGSCECLKSHLKTVSIQGFHTERYEVLCLKYLILEGEVLETVAFFCEDKVCFAAKDDEAAEIELMFPKNLVQDRWSFQSAIDLSLDDPFFYAVES |
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| Function | - | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsZS97_01G0382300 | OsZS97_01T0382300.1 | Chr01 | 24926960 | 24929426 | - | makerRMon | ||
| CDS seq | ATGGATGCCGCCGGCGAGGAAGGGGGCATGACCTACGGGGAAGTGGTGGACTACTTCAACTCCTTGCAGGACCCGCCGGCGCAGGAGCACATCGACTGCATCATCCCCTACCTCATCTCCCTCCTCCCCGCGCCCTTCGTCCCCGCGCCGCCCGACGCCGCCTCCGCCGACGACTCCGAGGACGACCACTTCTCCTTCACCTCGTCCGACGACTACTCCGCCGCCGAAGACGCCCGCTCCTTCCCGTCGCCGCCGCCGGGGGATGGCGAGGAGGACCACATCAGCCGCCTCGCGGACGACCTCCTCTCGGAGATCATCCCCCGCCTCTCCACCAAGGAAGCCGCGCGCACCATGGCGCTGTCCACGCGCTGGCGCCGCGTGTGGGCGAAGACCTCCCTCCTCGTCGACGACGCGCACCTCAGGGACGCCGACAACGAGGTCTCCCTCGTCCGCGCCATCTCCCGCTGCGTGGACGCGCACCCGGGCCCCGTCCGCGCCGCGCGCATCACCCACGTCGCCTTCTACCACCACGAGTACGCGCTCCGGCGCCTCGTGGCGAGCCTGGCCGACAAAAACGTCGAGGACCTCATCCTCTTCAACCGCCCGTGGCCGCTCAACATGCCGCTCCCCGACGACATCTTCCGCTGCGCCTACCTCCGGCGGCTGTACCTCGGCGCATGGATGTTCCCCGAAGTCGCCGCTGCCGCCTTAGTAAACCTCCGCGAGCTCGGCCTCTTCCACTGCATCATCCCCGACCGAGACTTCGACGCCCTGCTCTCGCTCTGCAGTAAGCTGGAGGTGCTCTCCCTCGCCATGTCGTACAACTGCCCGTCGCGGCTCCGCATCAAGTCCCCAAGCCTCCGGGCCGCGGTGGAGTGGATGTCCAGCCTCGACGAGATTGTCGTCGACGGCGCGCCATGCCTGGAGCGGCTGCTCCTCCACCACGCCATCCCCGTCGCCGAGCGTACGCCCATCAAGATCGTAAGCGCGCCAAGGCTGGAGGTGCTCGGCATCCTGGACCTCCAGCTCCACGAGCTCCAGATTGGCGGCACCACCATCAGGCCTGGGATGTGGATGTTTGTGAAGTCTAGCGCCAAGCTCCCGAGCTTGAAGATACTTGCTGTCAAGGTGTGTTTGGCGATCGAACGGGAGATCAAGCTGCTGATGACGCTGCTCAAATGCTTCCCTCACCTCGAGACTCTTCACATCAAGTCCATTCCTCCATGCGCATCACCTGAAATCGCGAATTGCGCGGATGTTTGGGAATCCCTGGGTTCCTGCGAATGCCTCAAGTCGCATCTCAAGACAGTCAGCATCCAAGGGTTCCACACCGAGCGCTATGAGGTGTTGTGCCTCAAGTACCTCATCTTGGAGGGGGAGGTGCTCGAGACCGTGGCCTTCTTCTGCGAGGATAAAGTGTGCTTCGCCGCCAAGGACGACGAGGCGGCGGAGATCGAGCTGATGTTTCCCAAGAACCTCGTCCAAGATCGCTGGAGCTTCCAGAGCGCCATTGATCTGTCTCTCGACGATCCCTTCTTCTACGCCGTGGAGAGCTGA
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| Protein seq | MDAAGEEGGMTYGEVVDYFNSLQDPPAQEHIDCIIPYLISLLPAPFVPAPPDAASADDSEDDHFSFTSSDDYSAAEDARSFPSPPPGDGEEDHISRLADDLLSEIIPRLSTKEAARTMALSTRWRRVWAKTSLLVDDAHLRDADNEVSLVRAISRCVDAHPGPVRAARITHVAFYHHEYALRRLVASLADKNVEDLILFNRPWPLNMPLPDDIFRCAYLRRLYLGAWMFPEVAAAALVNLRELGLFHCIIPDRDFDALLSLCSKLEVLSLAMSYNCPSRLRIKSPSLRAAVEWMSSLDEIVVDGAPCLERLLLHHAIPVAERTPIKIVSAPRLEVLGILDLQLHELQIGGTTIRPGMWMFVKSSAKLPSLKILAVKVCLAIEREIKLLMTLLKCFPHLETLHIKSIPPCASPEIANCADVWESLGSCECLKSHLKTVSIQGFHTERYEVLCLKYLILEGEVLETVAFFCEDKVCFAAKDDEAAEIELMFPKNLVQDRWSFQSAIDLSLDDPFFYAVES
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.104961 | 0.480093 | 0.6655255 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_01g0598400 | RBH | 0.000000 | 0.343344 | 0.000000 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os01g41530 | RBH | 0.000000 | 0.230928 | 0.000000 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os01g0598400 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_01g0024120 | RBH | 0.0 | 0.0 | 0.432315 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_01g0023680 | RBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_01g0024030 | RBH | 0.0 | 0.0 | 0.394917 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_01g0023380 | RBH | 0.0 | 0.000000 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_01g0023130 | RBH | 0.713588 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_01G0393100 | RBH | 0.074542 | 1.3115345 | 0.660616 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_01g0023050 | RBH | 0.000000 | 0.0 | 0.000000 |
| Zhenshan 97 | ZS97RS3 | HZAU | NA | NA | NA | NA | NA |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_01g0023060 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_01g0023050 | RBH | 0.0 | 0.000000 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_01g0023300 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_01g0023290 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_01g0023160 | RBH | 0.000000 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_01G023400 | RBH | 0.000000 | 0.0 | 0.000000 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_01g0023100 | RBH | 0.0 | 0.0 | 0.0 |
