Basic Info |
Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
OsZS97_01G0242200 | OGI:01044920 | 16/16 | Zhenshan 97 | ZS97RS3 | HZAU | Chr01:14996023-14996346 | ||||||||
Gene Symbol | - | ||||||||||
DNA seq | TCATGCCAAGTTCTCTATAGTGCCCATTCTTCTTGGCTTCACGGCGGAGTGCCTCGTACTTGTGAACTCATCGAAGATGTCGTTAGCCTCATAGGCCACCTTCTTGAGTGCCTCAAGCCAGGCTTTTGCTCCTTCTCGGTGGGATGCCTGCTCCTCAGCATCGGTGATAACATCAAGGATAGCTGGCAGCTTGCGCTTGAGGATCTCATGCTGCTCCTCCATGCCTTCCATCACCTTGTACTTGTCCAGAAGGTAGCTGGAGGCCTTCTCCTTCACCATTGACACCAGCGGCCCGATCACCATGCTGGTCACCAGCTCAGCCAT |
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CDS seq | ATGGCTGAGCTGGTGACCAGCATGGTGATCGGGCCGCTGGTGTCAATGGTGAAGGAGAAGGCCTCCAGCTACCTTCTGGACAAGTACAAGGTGATGGAAGGCATGGAGGAGCAGCATGAGATCCTCAAGCGCAAGCTGCCAGCTATCCTTGATGTTATCACCGATGCTGAGGAGCAGGCATCCCACCGAGAAGGAGCAAAAGCCTGGCTTGAGGCACTCAAGAAGGTGGCCTATGAGGCTAACGACATCTTCGATGAGTTCACAAGTACGAGGCACTCCGCCGTGAAGCCAAGAAGAATGGGCACTATAGAGAACTTGGCATGA |
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Protein seq | MAELVTSMVIGPLVSMVKEKASSYLLDKYKVMEGMEEQHEILKRKLPAILDVITDAEEQASHREGAKAWLEALKKVAYEANDIFDEFTSTRHSAVKPRRMGTIENLA |
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Function | - |
Transcripts
Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
OsZS97_01G0242200 | OsZS97_01T0242200.1 | Chr01 | 14996023 | 14996346 | - | makerRMon | ||
CDS seq | ATGGCTGAGCTGGTGACCAGCATGGTGATCGGGCCGCTGGTGTCAATGGTGAAGGAGAAGGCCTCCAGCTACCTTCTGGACAAGTACAAGGTGATGGAAGGCATGGAGGAGCAGCATGAGATCCTCAAGCGCAAGCTGCCAGCTATCCTTGATGTTATCACCGATGCTGAGGAGCAGGCATCCCACCGAGAAGGAGCAAAAGCCTGGCTTGAGGCACTCAAGAAGGTGGCCTATGAGGCTAACGACATCTTCGATGAGTTCACAAGTACGAGGCACTCCGCCGTGAAGCCAAGAAGAATGGGCACTATAGAGAACTTGGCATGA
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Protein seq | MAELVTSMVIGPLVSMVKEKASSYLLDKYKVMEGMEEQHEILKRKLPAILDVITDAEEQASHREGAKAWLEALKKVAYEANDIFDEFTSTRHSAVKPRRMGTIENLA |
Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
Leaf | Root | Panicle | |
FPKM | 1.038508 | 2.7635785 | 3.2883595 |
Homologues
Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
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Leaf | Root | Panicle | |||
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_01g0359800 | SBH | 0.557073 | 0.127094 | 0.405708 |
Nipponbare | IRGSP 1.0 | MSU | LOC_Os01g25810 | SBH | 0.224871 | 0.196268 | 0.044757 |
Nipponbare | IRGSP 1.0 | RAP-db | Os01g0359800 | SBH | None | None | None |
Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_01g0016750 | RBH | 2.686067 | 8.307322 | 7.161385 |
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_01g0016430 | SBH | 0.186836 | 2.266571 | 1.176480 |
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_01g0016640 | SBH | 3.956863 | 7.882003 | 12.720966 |
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_01g0016130 | SBH | 0.234253 | 0.193804 | None |
PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_01g0016200 | RBH | 0.332041 | 4.435171 | 0.372113 |
Minghui 63 | MH63RS3 | HZAU | OsMH63_01G0246300 | SBH | 10.1699405 | 25.732087 | 2.949927 |
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_01g0016270 | RBH | 0.030398 | 0.041041 | 0.000000 |
Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_01G0241300 | RBH | 3.65888 | 4.404012 | 0.3359725 |
LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_01g0016170 | RBH | 0.0 | 0.024738 | None |
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_01g0016140 | RBH | 0.000000 | 4.488492 | None |
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_01g0016360 | RBH | 0.000000 | 6.161263 | None |
LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_01g0016170 | SBH | 0.820173 | 0.367919 | 0.316204 |
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_01g0016020 | RBH | 0.081282 | 1.027824 | None |
N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_01G016410 | SBH | 0.000000 | 0.953416 | 0.175151 |
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_01g0016190 | RBH | 0.990932 | 11.795040 | 1.633597 |