Basic Info

Gene ID OGI # | Score   Accession | Assembly | Annotation Location Links
OsZS97_01G0242200 OGI:01044920 | 16/16 Zhenshan 97 | ZS97RS3 | HZAU Chr01:14996023-14996346
Gene Symbol -
DNA seq

TCATGCCAAGTTCTCTATAGTGCCCATTCTTCTTGGCTTCACGGCGGAGTGCCTCGTACTTGTGAACTCATCGAAGATGTCGTTAGCCTCATAGGCCACCTTCTTGAGTGCCTCAAGCCAGGCTTTTGCTCCTTCTCGGTGGGATGCCTGCTCCTCAGCATCGGTGATAACATCAAGGATAGCTGGCAGCTTGCGCTTGAGGATCTCATGCTGCTCCTCCATGCCTTCCATCACCTTGTACTTGTCCAGAAGGTAGCTGGAGGCCTTCTCCTTCACCATTGACACCAGCGGCCCGATCACCATGCTGGTCACCAGCTCAGCCAT

CDS seq

ATGGCTGAGCTGGTGACCAGCATGGTGATCGGGCCGCTGGTGTCAATGGTGAAGGAGAAGGCCTCCAGCTACCTTCTGGACAAGTACAAGGTGATGGAAGGCATGGAGGAGCAGCATGAGATCCTCAAGCGCAAGCTGCCAGCTATCCTTGATGTTATCACCGATGCTGAGGAGCAGGCATCCCACCGAGAAGGAGCAAAAGCCTGGCTTGAGGCACTCAAGAAGGTGGCCTATGAGGCTAACGACATCTTCGATGAGTTCACAAGTACGAGGCACTCCGCCGTGAAGCCAAGAAGAATGGGCACTATAGAGAACTTGGCATGA

Protein seq

MAELVTSMVIGPLVSMVKEKASSYLLDKYKVMEGMEEQHEILKRKLPAILDVITDAEEQASHREGAKAWLEALKKVAYEANDIFDEFTSTRHSAVKPRRMGTIENLA

Function -

Transcripts

Gene Transcript Chromosome Start End Strand Source
OsZS97_01G0242200 OsZS97_01T0242200.1 Chr01 14996023 14996346 - makerRMon
CDS seq

ATGGCTGAGCTGGTGACCAGCATGGTGATCGGGCCGCTGGTGTCAATGGTGAAGGAGAAGGCCTCCAGCTACCTTCTGGACAAGTACAAGGTGATGGAAGGCATGGAGGAGCAGCATGAGATCCTCAAGCGCAAGCTGCCAGCTATCCTTGATGTTATCACCGATGCTGAGGAGCAGGCATCCCACCGAGAAGGAGCAAAAGCCTGGCTTGAGGCACTCAAGAAGGTGGCCTATGAGGCTAACGACATCTTCGATGAGTTCACAAGTACGAGGCACTCCGCCGTGAAGCCAAGAAGAATGGGCACTATAGAGAACTTGGCATGA

More
Protein seq

MAELVTSMVIGPLVSMVKEKASSYLLDKYKVMEGMEEQHEILKRKLPAILDVITDAEEQASHREGAKAWLEALKKVAYEANDIFDEFTSTRHSAVKPRRMGTIENLA

Event Type Chromosome Start End Strand Alternative mRNAs Total mRNAs Source

Expression

Leaf Root Panicle
FPKM 1.038508 2.7635785 3.2883595

Homologues

Genome & Annotation Homologs Type Expression(FPKM)
Leaf Root Panicle
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) OsNip_01g0359800 SBH 0.557073 0.127094 0.405708
Nipponbare | IRGSP 1.0 | MSU LOC_Os01g25810 SBH 0.224871 0.196268 0.044757
Nipponbare | IRGSP 1.0 | RAP-db Os01g0359800 SBH None None None
Azucena | AzucenaRS1 | Gramene(+IsoSeq) OsAzu_01g0016750 RBH 2.686067 8.307322 7.161385
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) OsKeNa_01g0016430 SBH 0.186836 2.266571 1.176480
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) OsCMeo_01g0016640 SBH 3.956863 7.882003 12.720966
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) OsARC_01g0016130 SBH 0.234253 0.193804 None
PR 106 | Os127742RS1 | Gramene(+IsoSeq) OsPr106_01g0016200 RBH 0.332041 4.435171 0.372113
Minghui 63 | MH63RS3 | HZAU OsMH63_01G0246300 SBH 10.1699405 25.732087 2.949927
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) OsIR64_01g0016270 RBH 0.030398 0.041041 0.000000
Zhenshan 97 | ZS97RS3 | HZAU OsZS97_01G0241300 RBH 3.65888 4.404012 0.3359725
LIMA | Os127564RS1 | Gramene(+IsoSeq) OsLima_01g0016170 RBH 0.0 0.024738 None
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) OsKYG_01g0016140 RBH 0.000000 4.488492 None
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) OsGoSa_01g0016360 RBH 0.000000 6.161263 None
LIU XU | Os125827RS1 | Gramene(+IsoSeq) OsLiXu_01g0016170 SBH 0.820173 0.367919 0.316204
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) OsLaMu_01g0016020 RBH 0.081282 1.027824 None
N22 | OsN22RS2 | Gramene(+IsoSeq) OsN22_01G016410 SBH 0.000000 0.953416 0.175151
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) OsNaBo_01g0016190 RBH 0.990932 11.795040 1.633597
Powered by

© 2021- Rice Gene Index @Zhang Lab. All Rights Reserved.

National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

Any comments and suggestions, please contact us.