Basic Info |
Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
OsZS97_01G0236000 | OGI:01043350 | 2/16 | Zhenshan 97 | ZS97RS3 | HZAU | Chr01:14585191-14588643 | ||||||||
Gene Symbol | - | ||||||||||
DNA seq | ATGGCAGATTCAATGCTTAGCACGATTCCTTCATGGCTCCCCGTAGGGTAAGTGACTTAACTTTCCGTCGTTCATAATTTTGACGTAGTTGTATGCGTGGAGATCATTTTGGTTGATAGATACATACATTGATAGATACATACTATTGTGTTCATCCACAGGATGGACCCCTTAACTACATATTTGTTGGAAATCATACTAGCCGGGGATCGAAAAAATGCTAGGGTGGAATATGATTGGTTTATTTTCAGTAAAGTGATAGACTCAAATGCGATGTGCTACAAAGACTTTATTGATGATATTGCGAAGTCATATCCATGGGGGCCAAATGAAACTGTCACAGTTGGCTACGTGGATATGGTTCATAAAATTACTCATCATGTCACAACTGACCAGGATATGCTTGCAATGTTTGAAAAATTTGTTGATATCAAGGTGATTCCAATGATTATTCGCATACATGGTATTAATGAAAGTATTGATGAGTTAGACCACACTCTTGTTAAAGAAAGCACATGTGTTCCCGATACTCGTTCTTTGGCAACCCCATCTCAAGTGGATTTCAGCCAACCTAGCAGCAGCACTCTTCCTTCTCATGTCATTGTGCCATCAGACACATACTTAGTAAACCCATTTCCTATGGCTGAACATGTTGGTGTTGATGAGGAAGGCATATACTTAGATGAGGAGGAGGCTGTTGTTGGTCATGCTGATGAAACTAGAGGTGAAGGGGCTGTCAATGAAGTATCTGAGGATGAATCTTGGGCTACATCTGAGGATGAATCTGAGGATGCATCTGAGGATGATGGTGTCAATGAATCCGAGGATGAGTCAATGGCATCAGATGGGATGCCTGAACATATTCCTATTGCAACTTATGACAAAAATGACCCACCAATGATCGTAGGCAGCGTATATCCAAACATTAATGAATTTAGATTGGCAATAGCACAACATGCAATAAAAAAGGAGTTTGAATATAACATCATCCGAAGTGAACCAGGGCAATATACTGCAAGTTGTGCTGCTAAAGGCTGCAAATGGAGGATTCATGCATCCGTGGTTGCTGATGGTGTCACTATGATGGTATGTTTTTAATTTAAATCAGCATGCATTCTTTAAGTATATTGTCATATATATATATATATATATATATATATATATATATATATATATATATATTATTGTGGTATTGACTATATTTACATTTCAGGTGAAAACTAATCCTGTGCCACATGAATGCTCAAGTACTAGAAGAAGTGAGACTATCAAGGCTGCAAGCAAGTTTTGGATTTGTGAGAAGGTAAAAGATTGGTTGTTGGAGGATGCTAGTGTGGGAGCAAAGGAATTGCAAAGAAGAATCCATGAAACACATAAGGTTAAGATCAACTACAAAAGGGTGCATGCTGGTAGGGAGCTTGCTATCACAAAGTTGTATGGTAGTTGGAGAGAGAGTTTTGACATGTTATATAGATACAAGGCACAAATTGAGAAATCAAGTCCCGGCAGTTTTTTCATCATTGATCATCATACTGTTCTTGAAGAGATAAAATTCAGAAGGTTGTTCTTTGCCTTGAAACCATGTATTCATGGTTTCCTTACTGGTTGTAGGCCATATTTGGCCATAGACAGTACTTTCTTAACGGGCAAGTTTAAGGGGCAGCTAGCAATTGCTTGTGCTGTAGATGGACATAACTGGATGTACCCAGTTGCTTTGGGTATATTTGACTCAGAGACTGCTGAGAACTGGATGTGGTTCATGGAACAACTAAAAGATGCAATTGGCACTCCAAGTGGCTTGGCTATTTGTACTGATGCAGGGAAGGGGATAGATAGTGCAGTGCATGAGGTAAATTGCTTTCCTATGCAGCTAATATATTCTGTTATTTTCTTTAATAATAGCTAAAATGAGCTAAGATTCTCCTTTCTTGTAGGTCTTTCGTAATGCAGAACACCGGGAGTGCATGAAGCACATGGTCACCAACTTCAAAAAGAAGTTCACCGGCAAGATTTTTGATGATAACCTTTGGCCTGCGGCATATGCATGGAGCCCATACTTCTATGAGAAACATATGGCAGCCATACAAGAAGTTAAACCAGAAGCAGTAGCATACCTTAAGAAGTATCACAAAAGGCTATGGAGTAGGAGTCAGTTCTCTACAATTAGCAAGGTTGATTATGTGACAAATAACCTTGCACAAAGCTTCAACAATTTGGTGAAAGATTGGAAAGCACTACATTTATATGACTTCTTGGAGAGGATTCGGCGGTGGTTGTTGGTGCAATGGGATAAGAGGCAAAGAATAGGTAAGAAATTTGAAGGCTGCATTCTACCTCATATTGTCAAGGAATTGAATGAAAAAAGTAGAGATTTAGACATGGTGGTCACAAGGAATGGAGACTTTGAGGCAGAAATTGAGGTCAAGGGAGGTAGTGGGTTTAGACATGTTGTGAATTTGGAGCACAAAACATGTACATGTAGGGAATTCCAAATCTCAGGGAAGCCTTGTATCCATGCTATAGCATTCATCACATCAATTAGAGGAAGGCTTGCAGATTATGTGGATGATTGCTTTAGTGTGCATCGATTCAGGGCAGCATATGAGAAATTGATCCCTTCATTACCTGACAAGGCACAATGGCCAAAAGCTGATCATGGGTTTTTCTTGGCACCACCCATTCTGAAGAAATCAGCTGGGAGACCAAGAACTATGAGGTACAAAGGATGCACTGAGAAAGGAAGCAAAAGGAGTAGGAGGCACAAATGCCCAATTTGCAAGAGTTATGGCCATCATTGGCACAATTGCAAAGAGGGTGATCCAGAGGAAGTAGCAGCAATGATTGCTGAAAGGTACATATCATTGCAAGTCTTTTATTCATTGTAGTTGGTGGTTACAATTTAGGCAACTGTGTAAGTTGATAAATATATGTCATGACATTCCATCCTTGTAGTACTAGACATTATAATTAATGGATAAGATTAGAAAGTAATATGCTGGTTCGATTTAATTACCTAAACACTTGTATATATTTGTCTCACAAATTTCCATTCTATTTCTAACAAGCCTTATGACATATATTTTCTCTTGTTCATAGAGGGCCACCAAAGAAGAGAACGAAGAAAACTAATGAAGCAACCTCGGAGACTAGTATCATGGCTGCTCCAATAGTTACACCAATAATGGCATACCCTCCTAGGTTAGCAAATCTTCTTTATTTCATTCTACATTGGATTTAGATCAATTAGCTACATAATAGTTTATTTTTCACAGTCAAAACTTTAATTTCACCGAGGACAATATAGCATGGAACAATAGCTCGGGTTCAAGTATATCAATTAGGTAAGTAATTAGATCAATTATGTCAATTTGCTGGTATTATGTTGTTCTATGCAATATATTCACAATTCTCCTTTTCAGATCAATATCACTTACTGGCTCCAACCAACTTTAG
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CDS seq | ATGGCAGATTCAATGCTTAGCACGATTCCTTCATGGCTCCCCGTAGGGATGGACCCCTTAACTACATATTTGTTGGAAATCATACTAGCCGGGGATCGAAAAAATGCTAGGGTGGAATATGATTGGTTTATTTTCAGTAAAGTGATAGACTCAAATGCGATGTGCTACAAAGACTTTATTGATGATATTGCGAAGTCATATCCATGGGGGCCAAATGAAACTGTCACAGTTGGCTACGTGGATATGGTTCATAAAATTACTCATCATGTCACAACTGACCAGGATATGCTTGCAATGTTTGAAAAATTTGTTGATATCAAGGTGATTCCAATGATTATTCGCATACATGGTATTAATGAAAGTATTGATGAGTTAGACCACACTCTTGTTAAAGAAAGCACATGTGTTCCCGATACTCGTTCTTTGGCAACCCCATCTCAAGTGGATTTCAGCCAACCTAGCAGCAGCACTCTTCCTTCTCATGTCATTGTGCCATCAGACACATACTTAGTAAACCCATTTCCTATGGCTGAACATGTTGGTGTTGATGAGGAAGGCATATACTTAGATGAGGAGGAGGCTGTTGTTGGTCATGCTGATGAAACTAGAGGTGAAGGGGCTGTCAATGAAGTATCTGAGGATGAATCTTGGGCTACATCTGAGGATGAATCTGAGGATGCATCTGAGGATGATGGTGTCAATGAATCCGAGGATGAGTCAATGGCATCAGATGGGATGCCTGAACATATTCCTATTGCAACTTATGACAAAAATGACCCACCAATGATCGTAGGCAGCGTATATCCAAACATTAATGAATTTAGATTGGCAATAGCACAACATGCAATAAAAAAGGAGTTTGAATATAACATCATCCGAAGTGAACCAGGGCAATATACTGCAAGTTGTGCTGCTAAAGGCTGCAAATGGAGGATTCATGCATCCGTGGTTGCTGATGGTGTCACTATGATGGTGAAAACTAATCCTGTGCCACATGAATGCTCAAGTACTAGAAGAAGTGAGACTATCAAGGCTGCAAGCAAGTTTTGGATTTGTGAGAAGGTAAAAGATTGGTTGTTGGAGGATGCTAGTGTGGGAGCAAAGGAATTGCAAAGAAGAATCCATGAAACACATAAGGTTAAGATCAACTACAAAAGGGTGCATGCTGGTAGGGAGCTTGCTATCACAAAGTTGTATGGTAGTTGGAGAGAGAGTTTTGACATGTTATATAGATACAAGGCACAAATTGAGAAATCAAGTCCCGGCAGTTTTTTCATCATTGATCATCATACTGTTCTTGAAGAGATAAAATTCAGAAGGTTGTTCTTTGCCTTGAAACCATGTATTCATGGTTTCCTTACTGGTTGTAGGCCATATTTGGCCATAGACAGTACTTTCTTAACGGGCAAGTTTAAGGGGCAGCTAGCAATTGCTTGTGCTGTAGATGGACATAACTGGATGTACCCAGTTGCTTTGGGTATATTTGACTCAGAGACTGCTGAGAACTGGATGTGGTTCATGGAACAACTAAAAGATGCAATTGGCACTCCAAGTGGCTTGGCTATTTGTACTGATGCAGGGAAGGGGATAGATAGTGCAGTGCATGAGGTCTTTCGTAATGCAGAACACCGGGAGTGCATGAAGCACATGGTCACCAACTTCAAAAAGAAGTTCACCGGCAAGATTTTTGATGATAACCTTTGGCCTGCGGCATATGCATGGAGCCCATACTTCTATGAGAAACATATGGCAGCCATACAAGAAGTTAAACCAGAAGCAGTAGCATACCTTAAGAAGTATCACAAAAGGCTATGGAGTAGGAGTCAGTTCTCTACAATTAGCAAGGTTGATTATGTGACAAATAACCTTGCACAAAGCTTCAACAATTTGGTGAAAGATTGGAAAGCACTACATTTATATGACTTCTTGGAGAGGATTCGGCGGTGGTTGTTGGTGCAATGGGATAAGAGGCAAAGAATAGGTAAGAAATTTGAAGGCTGCATTCTACCTCATATTGTCAAGGAATTGAATGAAAAAAGTAGAGATTTAGACATGGTGGTCACAAGGAATGGAGACTTTGAGGCAGAAATTGAGGTCAAGGGAGCATATGAGAAATTGATCCCTTCATTACCTGACAAGGCACAATGGCCAAAAGCTGATCATGGGTTTTTCTTGGCACCACCCATTCTGAAGAAATCAGCTGGGAGACCAAGAACTATGAGGTACAAAGGATGCACTGAGAAAGGAAGCAAAAGGAGTAGGAGGCACAAATGCCCAATTTGCAAGAGTTATGGCCATCATTGGCACAATTGCAAAGAGGGTGATCCAGAGGAAGTAGCAGCAATGATTGCTGAAAGAGGGCCACCAAAGAAGAGAACGAAGAAAACTAATGAAGCAACCTCGGAGACTAGTATCATGGCTGCTCCAATAGTTACACCAATAATGGCATACCCTCCTAGATCAATATCACTTACTGGCTCCAACCAACTTTAG
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Protein seq | MADSMLSTIPSWLPVGMDPLTTYLLEIILAGDRKNARVEYDWFIFSKVIDSNAMCYKDFIDDIAKSYPWGPNETVTVGYVDMVHKITHHVTTDQDMLAMFEKFVDIKVIPMIIRIHGINESIDELDHTLVKESTCVPDTRSLATPSQVDFSQPSSSTLPSHVIVPSDTYLVNPFPMAEHVGVDEEGIYLDEEEAVVGHADETRGEGAVNEVSEDESWATSEDESEDASEDDGVNESEDESMASDGMPEHIPIATYDKNDPPMIVGSVYPNINEFRLAIAQHAIKKEFEYNIIRSEPGQYTASCAAKGCKWRIHASVVADGVTMMVKTNPVPHECSSTRRSETIKAASKFWICEKVKDWLLEDASVGAKELQRRIHETHKVKINYKRVHAGRELAITKLYGSWRESFDMLYRYKAQIEKSSPGSFFIIDHHTVLEEIKFRRLFFALKPCIHGFLTGCRPYLAIDSTFLTGKFKGQLAIACAVDGHNWMYPVALGIFDSETAENWMWFMEQLKDAIGTPSGLAICTDAGKGIDSAVHEVFRNAEHRECMKHMVTNFKKKFTGKIFDDNLWPAAYAWSPYFYEKHMAAIQEVKPEAVAYLKKYHKRLWSRSQFSTISKVDYVTNNLAQSFNNLVKDWKALHLYDFLERIRRWLLVQWDKRQRIGKKFEGCILPHIVKELNEKSRDLDMVVTRNGDFEAEIEVKGAYEKLIPSLPDKAQWPKADHGFFLAPPILKKSAGRPRTMRYKGCTEKGSKRSRRHKCPICKSYGHHWHNCKEGDPEEVAAMIAERGPPKKRTKKTNEATSETSIMAAPIVTPIMAYPPRSISLTGSNQL |
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Function | - |
Transcripts
Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
OsZS97_01G0236000 | OsZS97_01T0236000.1 | Chr01 | 14585191 | 14588643 | + | makerRMon | ||
CDS seq | ATGGCAGATTCAATGCTTAGCACGATTCCTTCATGGCTCCCCGTAGGGATGGACCCCTTAACTACATATTTGTTGGAAATCATACTAGCCGGGGATCGAAAAAATGCTAGGGTGGAATATGATTGGTTTATTTTCAGTAAAGTGATAGACTCAAATGCGATGTGCTACAAAGACTTTATTGATGATATTGCGAAGTCATATCCATGGGGGCCAAATGAAACTGTCACAGTTGGCTACGTGGATATGGTTCATAAAATTACTCATCATGTCACAACTGACCAGGATATGCTTGCAATGTTTGAAAAATTTGTTGATATCAAGGTGATTCCAATGATTATTCGCATACATGGTATTAATGAAAGTATTGATGAGTTAGACCACACTCTTGTTAAAGAAAGCACATGTGTTCCCGATACTCGTTCTTTGGCAACCCCATCTCAAGTGGATTTCAGCCAACCTAGCAGCAGCACTCTTCCTTCTCATGTCATTGTGCCATCAGACACATACTTAGTAAACCCATTTCCTATGGCTGAACATGTTGGTGTTGATGAGGAAGGCATATACTTAGATGAGGAGGAGGCTGTTGTTGGTCATGCTGATGAAACTAGAGGTGAAGGGGCTGTCAATGAAGTATCTGAGGATGAATCTTGGGCTACATCTGAGGATGAATCTGAGGATGCATCTGAGGATGATGGTGTCAATGAATCCGAGGATGAGTCAATGGCATCAGATGGGATGCCTGAACATATTCCTATTGCAACTTATGACAAAAATGACCCACCAATGATCGTAGGCAGCGTATATCCAAACATTAATGAATTTAGATTGGCAATAGCACAACATGCAATAAAAAAGGAGTTTGAATATAACATCATCCGAAGTGAACCAGGGCAATATACTGCAAGTTGTGCTGCTAAAGGCTGCAAATGGAGGATTCATGCATCCGTGGTTGCTGATGGTGTCACTATGATGGTGAAAACTAATCCTGTGCCACATGAATGCTCAAGTACTAGAAGAAGTGAGACTATCAAGGCTGCAAGCAAGTTTTGGATTTGTGAGAAGGTAAAAGATTGGTTGTTGGAGGATGCTAGTGTGGGAGCAAAGGAATTGCAAAGAAGAATCCATGAAACACATAAGGTTAAGATCAACTACAAAAGGGTGCATGCTGGTAGGGAGCTTGCTATCACAAAGTTGTATGGTAGTTGGAGAGAGAGTTTTGACATGTTATATAGATACAAGGCACAAATTGAGAAATCAAGTCCCGGCAGTTTTTTCATCATTGATCATCATACTGTTCTTGAAGAGATAAAATTCAGAAGGTTGTTCTTTGCCTTGAAACCATGTATTCATGGTTTCCTTACTGGTTGTAGGCCATATTTGGCCATAGACAGTACTTTCTTAACGGGCAAGTTTAAGGGGCAGCTAGCAATTGCTTGTGCTGTAGATGGACATAACTGGATGTACCCAGTTGCTTTGGGTATATTTGACTCAGAGACTGCTGAGAACTGGATGTGGTTCATGGAACAACTAAAAGATGCAATTGGCACTCCAAGTGGCTTGGCTATTTGTACTGATGCAGGGAAGGGGATAGATAGTGCAGTGCATGAGGTCTTTCGTAATGCAGAACACCGGGAGTGCATGAAGCACATGGTCACCAACTTCAAAAAGAAGTTCACCGGCAAGATTTTTGATGATAACCTTTGGCCTGCGGCATATGCATGGAGCCCATACTTCTATGAGAAACATATGGCAGCCATACAAGAAGTTAAACCAGAAGCAGTAGCATACCTTAAGAAGTATCACAAAAGGCTATGGAGTAGGAGTCAGTTCTCTACAATTAGCAAGGTTGATTATGTGACAAATAACCTTGCACAAAGCTTCAACAATTTGGTGAAAGATTGGAAAGCACTACATTTATATGACTTCTTGGAGAGGATTCGGCGGTGGTTGTTGGTGCAATGGGATAAGAGGCAAAGAATAGGTAAGAAATTTGAAGGCTGCATTCTACCTCATATTGTCAAGGAATTGAATGAAAAAAGTAGAGATTTAGACATGGTGGTCACAAGGAATGGAGACTTTGAGGCAGAAATTGAGGTCAAGGGAGCATATGAGAAATTGATCCCTTCATTACCTGACAAGGCACAATGGCCAAAAGCTGATCATGGGTTTTTCTTGGCACCACCCATTCTGAAGAAATCAGCTGGGAGACCAAGAACTATGAGGTACAAAGGATGCACTGAGAAAGGAAGCAAAAGGAGTAGGAGGCACAAATGCCCAATTTGCAAGAGTTATGGCCATCATTGGCACAATTGCAAAGAGGGTGATCCAGAGGAAGTAGCAGCAATGATTGCTGAAAGAGGGCCACCAAAGAAGAGAACGAAGAAAACTAATGAAGCAACCTCGGAGACTAGTATCATGGCTGCTCCAATAGTTACACCAATAATGGCATACCCTCCTAGATCAATATCACTTACTGGCTCCAACCAACTTTAG
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Protein seq | MADSMLSTIPSWLPVGMDPLTTYLLEIILAGDRKNARVEYDWFIFSKVIDSNAMCYKDFIDDIAKSYPWGPNETVTVGYVDMVHKITHHVTTDQDMLAMFEKFVDIKVIPMIIRIHGINESIDELDHTLVKESTCVPDTRSLATPSQVDFSQPSSSTLPSHVIVPSDTYLVNPFPMAEHVGVDEEGIYLDEEEAVVGHADETRGEGAVNEVSEDESWATSEDESEDASEDDGVNESEDESMASDGMPEHIPIATYDKNDPPMIVGSVYPNINEFRLAIAQHAIKKEFEYNIIRSEPGQYTASCAAKGCKWRIHASVVADGVTMMVKTNPVPHECSSTRRSETIKAASKFWICEKVKDWLLEDASVGAKELQRRIHETHKVKINYKRVHAGRELAITKLYGSWRESFDMLYRYKAQIEKSSPGSFFIIDHHTVLEEIKFRRLFFALKPCIHGFLTGCRPYLAIDSTFLTGKFKGQLAIACAVDGHNWMYPVALGIFDSETAENWMWFMEQLKDAIGTPSGLAICTDAGKGIDSAVHEVFRNAEHRECMKHMVTNFKKKFTGKIFDDNLWPAAYAWSPYFYEKHMAAIQEVKPEAVAYLKKYHKRLWSRSQFSTISKVDYVTNNLAQSFNNLVKDWKALHLYDFLERIRRWLLVQWDKRQRIGKKFEGCILPHIVKELNEKSRDLDMVVTRNGDFEAEIEVKGAYEKLIPSLPDKAQWPKADHGFFLAPPILKKSAGRPRTMRYKGCTEKGSKRSRRHKCPICKSYGHHWHNCKEGDPEEVAAMIAERGPPKKRTKKTNEATSETSIMAAPIVTPIMAYPPRSISLTGSNQL
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Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
Leaf | Root | Panicle | |
FPKM | 0 | 0 | 0.004243 |
Homologues
Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
---|---|---|---|---|---|
Leaf | Root | Panicle | |||
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
Nipponbare | IRGSP 1.0 | MSU | LOC_Os11g03280 | SBH | 0.0 | 0.0 | 0.0 |
Nipponbare | IRGSP 1.0 | RAP-db | NA | NA | NA | NA | NA |
Azucena | AzucenaRS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_02g0014430 | SBH | 0.0 | 0.0 | 0.0 |
Minghui 63 | MH63RS3 | HZAU | OsMH63_01G0238300 | RBH | 0.017555 | 0.0293595 | 0.001248 |
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_02g0014260 | SBH | 0.0 | 0.000000 | 0.000000 |
Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_03G0609400 | SBH | 1.1411285 | 2.222568 | 0.5262745 |
LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_01g0015800 | RBH | 0.0 | 0.0 | None |
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_02g0014350 | SBH | 0.0 | 0.0 | None |
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_03g0041300 | SBH | 0.000000 | 0.000000 | None |
LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_01g0015860 | RBH | 0.0 | 0.0 | 0.0 |
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_02g0014500 | SBH | 0.0 | 0.0 | None |
N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_02G014820 | SBH | 0.0 | 0.0 | 0.0 |
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_02g0014520 | SBH | 0.0 | 0.0 | 0.0 |