Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsZS97_01G0036300 | OGI:01002250 | 16/16 | Zhenshan 97 | ZS97RS3 | HZAU | Chr01:2036148-2039722 | ||||||||
| Gene Symbol | RLCK23, OsRLCK23 | ||||||||||
| DNA seq | ATGAACCCGAAGTTGCTGTTCTTCCCGCTCTTGGCTACGTTGCTCCTCCTGTGCCACCACGCACACGCCGTCTGCGAGCCGGCAACATGCGGCAACCTCACCATCAAGTACCCATTCTGGCTAAGCGGTCCCGACCTCAACCGGTCGTCGTTGGCCATTGCCGCCTGTGGCCACCCGTCCTTCGAGTTGTGGTGTAGCCGCGATGGCGTGGCGTCGTTGAGGGGCTCGCAAATCCTCGTCCTCGGCATCGACTACACCAACAGTTCATTCGTTGCTGGACACAAAAGGGTCGCCGACGGCGGCGACGGCGTGTGCCGCACCGACTTCAACATATCGTCCAGTCTAGCTCTCAGCCCGTTCACGATTAGCAGCAGCAACCGGGCCATCTGCTTCCTCTACAGCTGCAACGGCACGGAGCCACCGGAGATCGACGGCCTTGTGAACGCCACCATCTCCAACTGCAGTAAGCCTATCTACGCGTACCTCGGCGGGAGCTACGACCGTGACAAGCCACCGGCGATCAAAGCCGGGAACTGCACGTACTCGTACCTGCCGGTGCTGTGGCCGGAGTCGCCGGTGAACTTGACGGCGGGGACCAACTACAGCCCGCTGTTCAAGAAGGGGTTCGTGTTGGAGTGGCAGAAGAATGGGTTCGGCGACTGCGACGCCTGTAACGCGAGCGGCGGGCAGTGCCGGTACAACAACGATTCCGCGGCGGCGTTCGCGTGCCTCTGCTCCGACGGAGAGCTGCGAGGGACGATATGCGCCGGTGAGCTCCTATTCCAGTTTCCACTACTTTCGAAAACATAAAATGATCTTTAAACATTGTTACACGTTCGTCCGTATGGCTTACTCCCTCCGTCCAAAAAAAACGCAATCCTGAGTTTGAACCTGGACACATAAGATTAGGTTTTTTTTTTTTGGACAAATGGAGTAATTCGTAGTACCCAAGTATGATATTGAGAGGAGTAATTTTACAGTGTCTCCTAATTTTGATACTTCTACCTCCTAATTCGTAGTACGAATAATAATTTTAGCGCAATTTTTGGTATCTCCTAATTGATATCTTCTAGTACTACAGGTACATAGAGATACCAAATTTTACAATAGAAAATACGATACCTCCCGGTAACTTATCAATGACTATAAATTTACTCATATATATGCTAATGGCATAATATTTTCTCAATCTTCTCTTTTCCTCCCATTTCAAATACACATATATTTAAAGTCTCTCAATCGAGTATGTTTGAGATGAGAGAAAAAAACATTGAGAAAATACATAAAACGATATGCTATTAGCGTATAGTTAATTCAATATGAATTATTTTAAGTTTAAAAAATAAATTAATACGATTTTAAAACAATTTTGCTATAGAATTTTTCTAGAGAAACATATCACGTCCCGGTCAATATATGCTATAATCTACATAGAGACGACTGCAAAGTGCGAGAGGACTTTGAACGTAGTCACGTAGACGACCCAGTCATAGAAGTTTGTCCTTCTCCGTAGCCAGAAATCGCGCAAATCTACACATAAGTCAATATTTTACAGATGCCAGCCGGCAAATTAGGCCAGAAATCTTGAAGTGGCAATCAACACCAAGGAAACGCACCCCACTGTTGCTGAGGAAAATATACTAATATACTACTTTTTTTTTGTGGGAAAAGAGAGGTATATTACTCAGCTATAGAGTCAGTACCAACAAGGTGAGATACGAAATTACAAGAATCATCTGGCCAGAGGGGTTCAGATCCCCTGAAGCTGGGGCCAACTCCACCGAGTGGATTTGGCCGAATCTGAGCCGTTCTTTTACTTCTACGGCTGGGATCATGGCACATACCTTTCTTCTAATTAACTATCTTTATCATATAGATTTGAAGGAAAAAAAAATACTTGGTATTCTAGCTAACCGTAACTGTGATTATTCTCCAGCCAACACAATCAACAAATCAGGCATCATCTAAAGAATATTGAACTTCAAACGTGATGCTTCATTTGTTTTGAGACAACATCAAATATTCTACTCTTGACATTACTTTTGCTGATAAAATCTGTTGTTTCAGGCAGCAAGAAAACTGGCAGGAGAACCATATTAATAGGTATGTCAAAAACATTTACCACAATACCATTGAATCATAAACCATAATAACAAAATAAAAACTTAAGGAAATAATATCCTTAATAGGAAAAGCCAATGATATCGCAAAATAAATGGTCGTAGTATACCATTATGATTTTGTAAAAGGAAATAACATGTGTTTTAATCTCAGTTTTGACAGCAGCAGCTGCAGGCTTGCTCTTGCCATGTATATATGTGCTAATATGGCATGGGAAGGGGAAACAACTACGGTATTTCCTTTACACAAAGACTAGCAGCACCAGTGAAAGGAACATTGAGGCCCTCATAATATCTTATGGATCAATAGCTCCAACAAGATACAAGTATTCAGAAGTAACAAAGATAACATCATTTCTTAATTATAAGCTTGGAGAAGGAGGTTATGGTGTTGTATTCAAAGGAAGGTTACAAGATGGTCGTCTGGTTGCGGTGAAATTCTTACATGACTCAAAAGGAAATGGAGAGGAATTTGTGAATGAGGTTATGAGCATTGGCAGGACCTCTCATATTAATATTGTTAGCTTATTTGGGTTTTGTTTGGAGGGGTCAAAACGAGCTCTTCTTTACGAGTACATGCCCAATGGTTCACTAGACAATTATATCTATTCAGAAAATCCCAAAGAAATTCTAGGGTGGGAAAAACTTTACGGAATCGCAATCGGGATTGCTCGTGGGCTAGAATACTTGCACCATAGTTGTAACACACGAATCATCCATTTCGATATAAAGCCTCAGAATATCCTTCTAGACCAGGATTTTTGCCCAAAGATTGCTGATTTTGGTTTAGCCAAACTGTGCCGCACCAAGGAGAGCAAGCTTTCAATGACAGGTGCTAGAGGAACAATTGGATTTATCGCTCCTGAAGTGATCTATCGATCCTTTGGAATTGTTTCAACAAAGTCAGATGTTTATAGTTACGGAATGATGTTGCTAGAGATGGTCGGAGGCCGGAAGAATGCTAAGTCAATGGTTGAAAATTCAAGTGAAAAGTATTTTCCAGATTGGATTTATGACCACTTTGCTCTGGATGATGGATTACAAGCTTGTGAAGTCACAAGTGAGGTTGAGCAAATAGCCAAAAAGATGACTTTAATTGGTTTGTGGTGTGTACAAGTATTGCCTATGCATCGGCCGACAATAACCCAGGTTTTAGATATGTTCGAGAGAAGTTTGGATGAACTGGAAATGCCACCAAAACAAAATTTCAGTGAATTACTGTAAGATACTTTCTCTACACATTATGATTTGGACTGGTAATATTTTCAGTGAATTTCATCTATGCTATTTCTGTTTTTCAGAGAACATCCAGCTCAGGAGATTAACACAGAAAGTACGAGTTCTACTATAAATACCAAAGCTGCACAAGCTCTAAGTGAAGGGCTAAGGGTTGAGGAGACAAGCCTCGTTAATTCAAACGATCCTACAGTGACTACCAACTATGCAAAAAGATGA
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| CDS seq | ATGAACCCGAAGTTGCTGTTCTTCCCGCTCTTGGCTACGTTGCTCCTCCTGTGCCACCACGCACACGCCGTCTGCGAGCCGGCAACATGCGGCAACCTCACCATCAAGTACCCATTCTGGCTAAGCGGTCCCGACCTCAACCGGTCGTCGTTGGCCATTGCCGCCTGTGGCCACCCGTCCTTCGAGTTGTGGTGTAGCCGCGATGGCGTGGCGTCGTTGAGGGGCTCGCAAATCCTCGTCCTCGGCATCGACTACACCAACAGTTCATTCGTTGCTGGACACAAAAGGGTCGCCGACGGCGGCGACGGCGTGTGCCGCACCGACTTCAACATATCGTCCAGTCTAGCTCTCAGCCCGTTCACGATTAGCAGCAGCAACCGGGCCATCTGCTTCCTCTACAGCTGCAACGGCACGGAGCCACCGGAGATCGACGGCCTTGTGAACGCCACCATCTCCAACTGCAGTAAGCCTATCTACGCGTACCTCGGCGGGAGCTACGACCGTGACAAGCCACCGGCGATCAAAGCCGGGAACTGCACGTACTCGTACCTGCCGGTGCTGTGGCCGGAGTCGCCGGTGAACTTGACGGCGGGGACCAACTACAGCCCGCTGTTCAAGAAGGGGTTCGTGTTGGAGTGGCAGAAGAATGGGTTCGGCGACTGCGACGCCTGTAACGCGAGCGGCGGGCAGTGCCGGTACAACAACGATTCCGCGGCGGCGTTCGCGTGCCTCTGCTCCGACGGAGAGCTGCGAGGGACGATATGCGCCGGCAGCAAGAAAACTGGCAGGAGAACCATATTAATAGTTTTGACAGCAGCAGCTGCAGGCTTGCTCTTGCCATGTATATATGTGCTAATATGGCATGGGAAGGGGAAACAACTACGGTATTTCCTTTACACAAAGACTAGCAGCACCAGTGAAAGGAACATTGAGGCCCTCATAATATCTTATGGATCAATAGCTCCAACAAGATACAAGTATTCAGAAGTAACAAAGATAACATCATTTCTTAATTATAAGCTTGGAGAAGGAGGTTATGGTGTTGTATTCAAAGGAAGGTTACAAGATGGTCGTCTGGTTGCGGTGAAATTCTTACATGACTCAAAAGGAAATGGAGAGGAATTTGTGAATGAGGTTATGAGCATTGGCAGGACCTCTCATATTAATATTGTTAGCTTATTTGGGTTTTGTTTGGAGGGGTCAAAACGAGCTCTTCTTTACGAGTACATGCCCAATGGTTCACTAGACAATTATATCTATTCAGAAAATCCCAAAGAAATTCTAGGGTGGGAAAAACTTTACGGAATCGCAATCGGGATTGCTCGTGGGCTAGAATACTTGCACCATAGTTGTAACACACGAATCATCCATTTCGATATAAAGCCTCAGAATATCCTTCTAGACCAGGATTTTTGCCCAAAGATTGCTGATTTTGGTTTAGCCAAACTGTGCCGCACCAAGGAGAGCAAGCTTTCAATGACAGGTGCTAGAGGAACAATTGGATTTATCGCTCCTGAAGTGATCTATCGATCCTTTGGAATTGTTTCAACAAAGTCAGATGTTTATAGTTACGGAATGATGTTGCTAGAGATGGTCGGAGGCCGGAAGAATGCTAAGTCAATGGTTGAAAATTCAAGTGAAAAGTATTTTCCAGATTGGATTTATGACCACTTTGCTCTGGATGATGGATTACAAGCTTGTGAAGTCACAAGTGAGGTTGAGCAAATAGCCAAAAAGATGACTTTAATTGGTTTGTGGTGTGTACAAGTATTGCCTATGCATCGGCCGACAATAACCCAGGTTTTAGATATGTTCGAGAGAAGTTTGGATGAACTGGAAATGCCACCAAAACAAAATTTCAGTGAATTACTAGAACATCCAGCTCAGGAGATTAACACAGAAAGTACGAGTTCTACTATAAATACCAAAGCTGCACAAGCTCTAAGTGAAGGGCTAAGGGTTGAGGAGACAAGCCTCGTTAATTCAAACGATCCTACAGTGACTACCAACTATGCAAAAAGATGA
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| Protein seq | MNPKLLFFPLLATLLLLCHHAHAVCEPATCGNLTIKYPFWLSGPDLNRSSLAIAACGHPSFELWCSRDGVASLRGSQILVLGIDYTNSSFVAGHKRVADGGDGVCRTDFNISSSLALSPFTISSSNRAICFLYSCNGTEPPEIDGLVNATISNCSKPIYAYLGGSYDRDKPPAIKAGNCTYSYLPVLWPESPVNLTAGTNYSPLFKKGFVLEWQKNGFGDCDACNASGGQCRYNNDSAAAFACLCSDGELRGTICAGSKKTGRRTILIVLTAAAAGLLLPCIYVLIWHGKGKQLRYFLYTKTSSTSERNIEALIISYGSIAPTRYKYSEVTKITSFLNYKLGEGGYGVVFKGRLQDGRLVAVKFLHDSKGNGEEFVNEVMSIGRTSHINIVSLFGFCLEGSKRALLYEYMPNGSLDNYIYSENPKEILGWEKLYGIAIGIARGLEYLHHSCNTRIIHFDIKPQNILLDQDFCPKIADFGLAKLCRTKESKLSMTGARGTIGFIAPEVIYRSFGIVSTKSDVYSYGMMLLEMVGGRKNAKSMVENSSEKYFPDWIYDHFALDDGLQACEVTSEVEQIAKKMTLIGLWCVQVLPMHRPTITQVLDMFERSLDELEMPPKQNFSELLEHPAQEINTESTSSTINTKAAQALSEGLRVEETSLVNSNDPTVTTNYAKR |
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| Function | LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 2.5 [UniProtKB/Swiss-Prot:F4HQ20] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsZS97_01G0036300 | OsZS97_01T0036300.1 | Chr01 | 2036148 | 2039722 | + | makerRMon | ||
| CDS seq | ATGAACCCGAAGTTGCTGTTCTTCCCGCTCTTGGCTACGTTGCTCCTCCTGTGCCACCACGCACACGCCGTCTGCGAGCCGGCAACATGCGGCAACCTCACCATCAAGTACCCATTCTGGCTAAGCGGTCCCGACCTCAACCGGTCGTCGTTGGCCATTGCCGCCTGTGGCCACCCGTCCTTCGAGTTGTGGTGTAGCCGCGATGGCGTGGCGTCGTTGAGGGGCTCGCAAATCCTCGTCCTCGGCATCGACTACACCAACAGTTCATTCGTTGCTGGACACAAAAGGGTCGCCGACGGCGGCGACGGCGTGTGCCGCACCGACTTCAACATATCGTCCAGTCTAGCTCTCAGCCCGTTCACGATTAGCAGCAGCAACCGGGCCATCTGCTTCCTCTACAGCTGCAACGGCACGGAGCCACCGGAGATCGACGGCCTTGTGAACGCCACCATCTCCAACTGCAGTAAGCCTATCTACGCGTACCTCGGCGGGAGCTACGACCGTGACAAGCCACCGGCGATCAAAGCCGGGAACTGCACGTACTCGTACCTGCCGGTGCTGTGGCCGGAGTCGCCGGTGAACTTGACGGCGGGGACCAACTACAGCCCGCTGTTCAAGAAGGGGTTCGTGTTGGAGTGGCAGAAGAATGGGTTCGGCGACTGCGACGCCTGTAACGCGAGCGGCGGGCAGTGCCGGTACAACAACGATTCCGCGGCGGCGTTCGCGTGCCTCTGCTCCGACGGAGAGCTGCGAGGGACGATATGCGCCGGCAGCAAGAAAACTGGCAGGAGAACCATATTAATAGTTTTGACAGCAGCAGCTGCAGGCTTGCTCTTGCCATGTATATATGTGCTAATATGGCATGGGAAGGGGAAACAACTACGGTATTTCCTTTACACAAAGACTAGCAGCACCAGTGAAAGGAACATTGAGGCCCTCATAATATCTTATGGATCAATAGCTCCAACAAGATACAAGTATTCAGAAGTAACAAAGATAACATCATTTCTTAATTATAAGCTTGGAGAAGGAGGTTATGGTGTTGTATTCAAAGGAAGGTTACAAGATGGTCGTCTGGTTGCGGTGAAATTCTTACATGACTCAAAAGGAAATGGAGAGGAATTTGTGAATGAGGTTATGAGCATTGGCAGGACCTCTCATATTAATATTGTTAGCTTATTTGGGTTTTGTTTGGAGGGGTCAAAACGAGCTCTTCTTTACGAGTACATGCCCAATGGTTCACTAGACAATTATATCTATTCAGAAAATCCCAAAGAAATTCTAGGGTGGGAAAAACTTTACGGAATCGCAATCGGGATTGCTCGTGGGCTAGAATACTTGCACCATAGTTGTAACACACGAATCATCCATTTCGATATAAAGCCTCAGAATATCCTTCTAGACCAGGATTTTTGCCCAAAGATTGCTGATTTTGGTTTAGCCAAACTGTGCCGCACCAAGGAGAGCAAGCTTTCAATGACAGGTGCTAGAGGAACAATTGGATTTATCGCTCCTGAAGTGATCTATCGATCCTTTGGAATTGTTTCAACAAAGTCAGATGTTTATAGTTACGGAATGATGTTGCTAGAGATGGTCGGAGGCCGGAAGAATGCTAAGTCAATGGTTGAAAATTCAAGTGAAAAGTATTTTCCAGATTGGATTTATGACCACTTTGCTCTGGATGATGGATTACAAGCTTGTGAAGTCACAAGTGAGGTTGAGCAAATAGCCAAAAAGATGACTTTAATTGGTTTGTGGTGTGTACAAGTATTGCCTATGCATCGGCCGACAATAACCCAGGTTTTAGATATGTTCGAGAGAAGTTTGGATGAACTGGAAATGCCACCAAAACAAAATTTCAGTGAATTACTAGAACATCCAGCTCAGGAGATTAACACAGAAAGTACGAGTTCTACTATAAATACCAAAGCTGCACAAGCTCTAAGTGAAGGGCTAAGGGTTGAGGAGACAAGCCTCGTTAATTCAAACGATCCTACAGTGACTACCAACTATGCAAAAAGATGA
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| Protein seq | MNPKLLFFPLLATLLLLCHHAHAVCEPATCGNLTIKYPFWLSGPDLNRSSLAIAACGHPSFELWCSRDGVASLRGSQILVLGIDYTNSSFVAGHKRVADGGDGVCRTDFNISSSLALSPFTISSSNRAICFLYSCNGTEPPEIDGLVNATISNCSKPIYAYLGGSYDRDKPPAIKAGNCTYSYLPVLWPESPVNLTAGTNYSPLFKKGFVLEWQKNGFGDCDACNASGGQCRYNNDSAAAFACLCSDGELRGTICAGSKKTGRRTILIVLTAAAAGLLLPCIYVLIWHGKGKQLRYFLYTKTSSTSERNIEALIISYGSIAPTRYKYSEVTKITSFLNYKLGEGGYGVVFKGRLQDGRLVAVKFLHDSKGNGEEFVNEVMSIGRTSHINIVSLFGFCLEGSKRALLYEYMPNGSLDNYIYSENPKEILGWEKLYGIAIGIARGLEYLHHSCNTRIIHFDIKPQNILLDQDFCPKIADFGLAKLCRTKESKLSMTGARGTIGFIAPEVIYRSFGIVSTKSDVYSYGMMLLEMVGGRKNAKSMVENSSEKYFPDWIYDHFALDDGLQACEVTSEVEQIAKKMTLIGLWCVQVLPMHRPTITQVLDMFERSLDELEMPPKQNFSELLEHPAQEINTESTSSTINTKAAQALSEGLRVEETSLVNSNDPTVTTNYAKR
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.5387575 | 1.639356 | 1.5475605 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_01g0138300 | RBH | 0.000000 | 0.279063 | 0.000000 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os01g04570 | RBH | 0.073249 | 0.186777 | 0.068148 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os01g0138300 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_01g0002670 | SBH | 0.000000 | 0.657511 | 0.237838 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_01g0002590 | SBH | 0.0 | 2.082065 | 0.070285 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_01g0002680 | RBH | 0.053964 | 0.0 | 0.464416 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_01g0002560 | SBH | 0.0 | 0.029560 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_01g0002650 | SBH | 0.000000 | 4.420455 | 0.969946 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_01G0036000 | RBH | 0.259951 | 2.0973055 | 0.250159 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_01g0002590 | RBH | 0.0 | 0.0 | 0.032247 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_01G0033800 | SBH | 0.4648405 | 0.345734 | 3.123703 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_01g0002480 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_01g0002640 | RBH | 0.000000 | 1.410245 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_01g0002680 | RBH | 0.522387 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_01g0002710 | RBH | 0.0 | 0.000000 | 0.056105 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_01g0002600 | RBH | 0.0 | 0.185763 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_01G002780 | SBH | 0.000000 | 0.221656 | 0.311188 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_01g0002610 | RBH | 0.0 | 0.0 | 1.047484 |
