Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsZS97_01G0015500 | OGI:01002250 | 16/16 | Zhenshan 97 | ZS97RS3 | HZAU | Chr01:841767-844955 | ||||||||
| Gene Symbol | RLCK4, OsRLCK4, RLCK13, OsRLCK13 | ||||||||||
| DNA seq | TCACTCGTCCTCCTCTAAGATTTCAGTTAGCCCAGAGGAGAATTGGTAAGAATCCATCATAGGTGACATGGATTCATCATCACAGAAGAATGTTCTTGGAGGCATCTGCAGGCCAACAACGCCACCTTCAAGCATCTCTATGACCTCGCTCATTGTCGGCCGATCGTGAGACTTCATCTGGATGCAATGTAGCCCTATGATGTACAGCTTCCTCTCCAATTCATGCATGTCAGCGGCAGTAGCATCAGATATCTCACCAGCACTCACCTGTTGCTCGGTTAGCCGGTCATACACCCACGACGGGTAGTAGGCCTGACTTGAGTTCTCTGCATGCATGTCTAAGTTCCTTCTTCCTCCAGCATCTCCAGCAGCAGCATTCCAAAGCTATAGACAACGGATTTGCTCGATATAACGCCAAAGCTTCGAGATATCATTTCAGGAGCAATATAACCTATTGTTCCCCTTAAGGCGCTGAGCGGCACAAAACTATTGTCCCTTGGGTACAGTTTGGCGAGGCCGAAATCAGCAACCTTTGGAACAAAGTTGTCATCAAGAAGGATGTTATGTGGCTTGATGTCAAAGTGCAGTATCTGCATATCGCATTCTCCATTATGAACATGACTCAAACTTTCATAAAGATAAAAACAAACAAGTCCACATGGCGGACTCTTACGATATCTCTAATTCAAACTGACATTAAATATTCTAATTAATAGATACAATTTCCTTAAATGAGCTCAATCTCTAAACGGCAATGTCAGTTATTCCAATCTAGGCCCATGTCGAGCCCAAGTCAAGTTGTATCGGCTGCTTGCCATATCGGCTTAATCATATTCCGACTCTGTTTCCAGCCGATGCGTAGTCCGTTTCTGGCAAGATCCAATCTTCAATTTTGCCTCGATATCCAACTCCAAATCTAAGTCTATCTTGCCAAATTTCACTGTTAACACCTAGCTACTGGCTAATTTAGCTATTCCATCACCCTCTTCTGAAATTGCAGTAAGCTTGGAGGAGTGAAAGTAAGAATCCATGACTTGTGGAGGTGGCATGCCATTGCCAATGCCATCCCCATCACAGAAAAATGGTCTCGGGGGCACTTGCAGCGCATCCACACCCCCTTCGAGCATCTCTATTGCCTCACTCATCGTCGGTCGATCGTGTGATTTCATCTGAATGCACCACAGCCCAACAAGGCATAGCTTCCTCTCCAGCTCATGCATGTTAGCAACATTTGATATCTCATCAAATTGTTGATCTGCTATTAGCTGGTCATAAACCCATGATGGGTAGTACGCCTTACTTTTACTTGAATCTGCATTTGGGTCCACGTTTCTTCTTCCTCCAGCCATCTCAAGTAGTAGCATTCCAAAGCTATAAACATCGGATTTGCTGGATATGACACCAAAACTCCGGGATACCATCTCAGGAGCCATATAACCCACTGTTCCCCGTAAAGCCCTGTCCGGCACAAAACTCTTGTCCCTCGGGTACAGTTTAGCGAGGCCGAAATCAGCAACTTTCGGAACAAAGTTATCATCAAGAAGGATGTTGTGTGGCTTGATATCAAAGTGTAGAATCTGCATATCACACCCTTGGTGCAAGTAGTTGATCCCCCTAGCAATGCCTAGAGCAATCTCATTGATCTTGTCCCATGAGAAACTTCTCTCAGACAAGTAAATATACTTGTCTAGAGATCCTCTAGGCATGTGTTCATAAACTAGGGCCCTTCTCATTTCCTCGGAGCAAAACCCCACAAGACGCACGACATTAACATGGTGAATCATGCCTATGGTGGCAACTTCACTGATGAATTCTTCTCCATTACAGTTGGAGTTGCCATTCAGCATCTTGACAGCCACATGGAGATCACCCGGGAGCAGCACACCCTTGTATACAGAGCCATAACCTCCTTGGCCGAGCTTCTCTCTGAAATGGCCGGTGATTGCAGTGATATCAGTGTAGGCATACCTTGTCGGTCCGAGCATTTGTTGCATTCGGAGAAACTTCTCAACTGCATCAATTGTAACCCTTGTTTTCCAGTACTTGTGTGCAAGGAAAACCAATACAGCCAAGGGCATCAACAGAAACCTGCATAGTGCTGTGTAGACAAGTTTGATCAACTGGAACCAATAAACTGCAATTTAAGCCTATATAATTCTGATCGACAACTTACCTGCAATCATCTTCTGGATCTGCAAGGCAAATGCTATTGTGTCTAACATTATACCCAAAGGCATACGGTAACGTGATGGAATTTGATGAACGGGTATGCAGAGCAGGAAATTTGTATCCGCCGAAAGAATGGTACCAAACCAATTGGTTTTGCCTGTACTAGTCGATGCGCTGTATGGAAGAACAAAAACGTCTGATATGATATCAAGAGCAGATATGCATCGATATTTATGTGAAAAATAAAGGTGTACAGACGTCAAGATCAGTAACTTACGGAATCGAATCCATTAGGCATTGCTTAAAGCTATATCTGAAAGGAAATTGGACTCTGAATCCTTTCCTCATAGATTTTACTACGTCTGCATAGCTTAAGCTTAAGCTTTCATTTACTGGTGCTACACTGTCCCGACCACCCAAAGGAGTCATGGCTAGGTATCCACAAGAAGGCTCAAGGCTCTGAATAAGAGCAGATTGTCGGCCAGTTAACACATAAACGAAGGATCTGCTGGTGCTCAGGCAAGCGACAGGCATGTACATAATCCAGCTACTGTTCTTTATTTCCTGCGAACAATTGACAAAGCTAGCTATCCTAGTCCATATTGCAGGGGCCAATTCAATGGTGCGGTGCGACTTGCGCTGGAAACTGGGCTCGCGAAGGGGATTCCATCGAGGAAGAGGGCAACTGCTAGGTGAATCCGAGATGTCAGCATCAACGATCAAGAAGGTAGAATCAGTGTAGTTGATGCCCGTCACATAGTATGTTCCGTTGTCAATCTGAATTGTAGCCTTGTCATCGGCACAATTGAGCTCGTACGACAGAACTCCACACTCAGATGGGTCACCTCGCCGGCGGAAAGGAGACGACACGCTGCTAAGATTACCACAGGTGAACGGAGGGCAGCCATGCCGATGATGCCGCCCACATACATCTGCGACAAGAACTGCAAGCAAACACAGGACAGAAATTACCCGCAGGATAGCAGTAGTAGAGCAATGAAACACACCATGAATCGCCAT
More
|
||||||||||
| CDS seq | ATGGCGATTCATGGTGTGTTTCATTGCTCTACTACTGCTATCCTGCGGGTAATTTCTGTCCTGTGTTTGCTTGCAGTTCTTGTCGCAGATGTATGTGGGCGGCATCATCGGCATGGCTGCCCTCCGTTCACCTGTGGTAATCTTAGCAGCGTGTCGTCTCCTTTCCGCCGGCGAGGTGACCCATCTGAGTGTGGAGTTCTGTCGTACGAGCTCAATTGTGCCGATGACAAGGCTACAATTCAGATTGACAACGGAACATACTATGTGACGGGCATCAACTACACTGATTCTACCTTCTTGATCGTTGATGCTGACATCTCGGATTCACCTAGCAGTTGCCCTCTTCCTCGATGGAATCCCCTTCGCGAGCCCAGTTTCCAGCGCAAGTCGCACCGCACCATTGAATTGGCCCCTGCAATATGGACTAGGATAGCTAGCTTTGTCAATTGTTCGCAGGAAATAAAGAACAGTAGCTGGATTATGTACATGCCTGTCGCTTGCCTGAGCACCAGCAGATCCTTCGTTTATGTGTTAACTGGCCGACAATCTGCTCTTATTCAGAGCCTTGAGCCTTCTTGTGGATACCTAGCCATGACTCCTTTGGGTGGTCGGGACAGTGTAGCACCAGTAAATGAAAGCTTAAGCTTAAGCTATGCAGACGTAGTAAAATCTATGAGGAAAGGATTCAGAGTCCAATTTCCTTTCAGATATAGCTTTAAGCAATGCCTAATGGATTCGATTCCCGCATCGACTAGTACAGGCAAAACCAATTGGTTTGGTACCATTCTTTCGGCGGATACAAATTTCCTGCTCTGCATACCCGTTCATCAAATTCCATCACGTTACCGTATGCCTTTGGGTATAATGTTAGACACAATAGCATTTGCCTTGCAGATCCAGAAGATGATTGCAGCACTATGCAGGTTTCTGTTGATGCCCTTGGCTGTATTGGTTTTCCTTGCACACAAGTACTGGAAAACAAGGGTTACAATTGATGCAGTTGAGAAGTTTCTCCGAATGCAACAAATGCTCGGACCGACAAGGTATGCCTACACTGATATCACTGCAATCACCGGCCATTTCAGAGAGAAGCTCGGCCAAGGAGGTTATGGCTCTGTATACAAGGGTGTGCTGCTCCCGGGTGATCTCCATGTGGCTGTCAAGATGCTGAATGGCAACTCCAACTGTAATGGAGAAGAATTCATCAGTGAAGTTGCCACCATAGGCATGATTCACCATGTTAATGTCGTGCGTCTTGTGGGGTTTTGCTCCGAGGAAATGAGAAGGGCCCTAGTTTATGAACACATGCCTAGAGGATCTCTAGACAAGTATATTTACTTGTCTGAGAGAAGTTTCTCATGGGACAAGATCAATGAGATTGCTCTAGGCATTGCTAGGGGGATCAACTACTTGCACCAAGGGTGTGATATGCAGATTCTACACTTTGATATCAAGCCACACAACATCCTTCTTGATGATAACTTTGTTCCGAAAGTTGCTGATTTCGGCCTCGCTAAACTGTACCCGAGGGACAAGAGTTTTGTGCCGGACAGGGCTTTACGGGGAACAGTGGGTTATATGGCTCCTGAGATGGTATCCCGGAGTTTTGGTGTCATATCCAGCAAATCCGATGTTTATAGCTTTGGAATGCTACTACTTGAGATGGCTGGAGGAAGAAGAAACGTGGACCCAAATGCAGATTCAAGTAAAAGTAAGGCGTACTACCCATCATGGGTTTATGACCAGCTAATAGCAGATCAACAATTTGATGAGATATCAAATGTTGCTAACATGCATGAGCTGGAGAGGAAGCTATGCCTTGTTGGGCTGTGGTGCATTCAGATGAAATCACACGATCGACCGACGATGAGTGAGGCAATAGAGATGCTCGAAGGGGGTGTGGATGCGCTGCAAGTGCCCCCGAGACCATTTTTCTGTGATGGGGATGGCATTGGCAATGGCATGCCACCTCCACAACTTTGGAATGCTGCTGCTGGAGATGCTGGAGGAAGAAGGAACTTAGACATGCATGCAGAGAACTCAAGTCAGGCCTACTACCCGTCGTGGGTGTATGACCGGCTAACCGAGCAACAGGTGAGTGCTGGTGAGATATCTGATGCTACTGCCGCTGACATGCATGAATTGGAGAGGAAGCTGTACATCATAGGGCTACATTGCATCCAGATGAAGTCTCACGATCGGCCGACAATGAGCGAGGTCATAGAGATGCTTGAAGGTGGCGTTGTTGGCCTGCAGATGCCTCCAAGAACATTCTTCTGTGATGATGAATCCATGTCACCTATGATGGATTCTTACCAATTCTCCTCTGGGCTAACTGAAATCTTAGAGGAGGACGAGTGA
More
|
||||||||||
| Protein seq | MAIHGVFHCSTTAILRVISVLCLLAVLVADVCGRHHRHGCPPFTCGNLSSVSSPFRRRGDPSECGVLSYELNCADDKATIQIDNGTYYVTGINYTDSTFLIVDADISDSPSSCPLPRWNPLREPSFQRKSHRTIELAPAIWTRIASFVNCSQEIKNSSWIMYMPVACLSTSRSFVYVLTGRQSALIQSLEPSCGYLAMTPLGGRDSVAPVNESLSLSYADVVKSMRKGFRVQFPFRYSFKQCLMDSIPASTSTGKTNWFGTILSADTNFLLCIPVHQIPSRYRMPLGIMLDTIAFALQIQKMIAALCRFLLMPLAVLVFLAHKYWKTRVTIDAVEKFLRMQQMLGPTRYAYTDITAITGHFREKLGQGGYGSVYKGVLLPGDLHVAVKMLNGNSNCNGEEFISEVATIGMIHHVNVVRLVGFCSEEMRRALVYEHMPRGSLDKYIYLSERSFSWDKINEIALGIARGINYLHQGCDMQILHFDIKPHNILLDDNFVPKVADFGLAKLYPRDKSFVPDRALRGTVGYMAPEMVSRSFGVISSKSDVYSFGMLLLEMAGGRRNVDPNADSSKSKAYYPSWVYDQLIADQQFDEISNVANMHELERKLCLVGLWCIQMKSHDRPTMSEAIEMLEGGVDALQVPPRPFFCDGDGIGNGMPPPQLWNAAAGDAGGRRNLDMHAENSSQAYYPSWVYDRLTEQQVSAGEISDATAADMHELERKLYIIGLHCIQMKSHDRPTMSEVIEMLEGGVVGLQMPPRTFFCDDESMSPMMDSYQFSSGLTEILEEDE |
||||||||||
| Function | Rust resistance kinase Lr10 [UniProtKB/Swiss-Prot:P93604] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsZS97_01G0015500 | OsZS97_01T0015500.1 | Chr01 | 841767 | 844955 | - | makerRMon | ||
| CDS seq | ATGGCGATTCATGGTGTGTTTCATTGCTCTACTACTGCTATCCTGCGGGTAATTTCTGTCCTGTGTTTGCTTGCAGTTCTTGTCGCAGATGTATGTGGGCGGCATCATCGGCATGGCTGCCCTCCGTTCACCTGTGGTAATCTTAGCAGCGTGTCGTCTCCTTTCCGCCGGCGAGGTGACCCATCTGAGTGTGGAGTTCTGTCGTACGAGCTCAATTGTGCCGATGACAAGGCTACAATTCAGATTGACAACGGAACATACTATGTGACGGGCATCAACTACACTGATTCTACCTTCTTGATCGTTGATGCTGACATCTCGGATTCACCTAGCAGTTGCCCTCTTCCTCGATGGAATCCCCTTCGCGAGCCCAGTTTCCAGCGCAAGTCGCACCGCACCATTGAATTGGCCCCTGCAATATGGACTAGGATAGCTAGCTTTGTCAATTGTTCGCAGGAAATAAAGAACAGTAGCTGGATTATGTACATGCCTGTCGCTTGCCTGAGCACCAGCAGATCCTTCGTTTATGTGTTAACTGGCCGACAATCTGCTCTTATTCAGAGCCTTGAGCCTTCTTGTGGATACCTAGCCATGACTCCTTTGGGTGGTCGGGACAGTGTAGCACCAGTAAATGAAAGCTTAAGCTTAAGCTATGCAGACGTAGTAAAATCTATGAGGAAAGGATTCAGAGTCCAATTTCCTTTCAGATATAGCTTTAAGCAATGCCTAATGGATTCGATTCCCGCATCGACTAGTACAGGCAAAACCAATTGGTTTGGTACCATTCTTTCGGCGGATACAAATTTCCTGCTCTGCATACCCGTTCATCAAATTCCATCACGTTACCGTATGCCTTTGGGTATAATGTTAGACACAATAGCATTTGCCTTGCAGATCCAGAAGATGATTGCAGCACTATGCAGGTTTCTGTTGATGCCCTTGGCTGTATTGGTTTTCCTTGCACACAAGTACTGGAAAACAAGGGTTACAATTGATGCAGTTGAGAAGTTTCTCCGAATGCAACAAATGCTCGGACCGACAAGGTATGCCTACACTGATATCACTGCAATCACCGGCCATTTCAGAGAGAAGCTCGGCCAAGGAGGTTATGGCTCTGTATACAAGGGTGTGCTGCTCCCGGGTGATCTCCATGTGGCTGTCAAGATGCTGAATGGCAACTCCAACTGTAATGGAGAAGAATTCATCAGTGAAGTTGCCACCATAGGCATGATTCACCATGTTAATGTCGTGCGTCTTGTGGGGTTTTGCTCCGAGGAAATGAGAAGGGCCCTAGTTTATGAACACATGCCTAGAGGATCTCTAGACAAGTATATTTACTTGTCTGAGAGAAGTTTCTCATGGGACAAGATCAATGAGATTGCTCTAGGCATTGCTAGGGGGATCAACTACTTGCACCAAGGGTGTGATATGCAGATTCTACACTTTGATATCAAGCCACACAACATCCTTCTTGATGATAACTTTGTTCCGAAAGTTGCTGATTTCGGCCTCGCTAAACTGTACCCGAGGGACAAGAGTTTTGTGCCGGACAGGGCTTTACGGGGAACAGTGGGTTATATGGCTCCTGAGATGGTATCCCGGAGTTTTGGTGTCATATCCAGCAAATCCGATGTTTATAGCTTTGGAATGCTACTACTTGAGATGGCTGGAGGAAGAAGAAACGTGGACCCAAATGCAGATTCAAGTAAAAGTAAGGCGTACTACCCATCATGGGTTTATGACCAGCTAATAGCAGATCAACAATTTGATGAGATATCAAATGTTGCTAACATGCATGAGCTGGAGAGGAAGCTATGCCTTGTTGGGCTGTGGTGCATTCAGATGAAATCACACGATCGACCGACGATGAGTGAGGCAATAGAGATGCTCGAAGGGGGTGTGGATGCGCTGCAAGTGCCCCCGAGACCATTTTTCTGTGATGGGGATGGCATTGGCAATGGCATGCCACCTCCACAACTTTGGAATGCTGCTGCTGGAGATGCTGGAGGAAGAAGGAACTTAGACATGCATGCAGAGAACTCAAGTCAGGCCTACTACCCGTCGTGGGTGTATGACCGGCTAACCGAGCAACAGGTGAGTGCTGGTGAGATATCTGATGCTACTGCCGCTGACATGCATGAATTGGAGAGGAAGCTGTACATCATAGGGCTACATTGCATCCAGATGAAGTCTCACGATCGGCCGACAATGAGCGAGGTCATAGAGATGCTTGAAGGTGGCGTTGTTGGCCTGCAGATGCCTCCAAGAACATTCTTCTGTGATGATGAATCCATGTCACCTATGATGGATTCTTACCAATTCTCCTCTGGGCTAACTGAAATCTTAGAGGAGGACGAGTGA
More
|
|||||||
| Protein seq | MAIHGVFHCSTTAILRVISVLCLLAVLVADVCGRHHRHGCPPFTCGNLSSVSSPFRRRGDPSECGVLSYELNCADDKATIQIDNGTYYVTGINYTDSTFLIVDADISDSPSSCPLPRWNPLREPSFQRKSHRTIELAPAIWTRIASFVNCSQEIKNSSWIMYMPVACLSTSRSFVYVLTGRQSALIQSLEPSCGYLAMTPLGGRDSVAPVNESLSLSYADVVKSMRKGFRVQFPFRYSFKQCLMDSIPASTSTGKTNWFGTILSADTNFLLCIPVHQIPSRYRMPLGIMLDTIAFALQIQKMIAALCRFLLMPLAVLVFLAHKYWKTRVTIDAVEKFLRMQQMLGPTRYAYTDITAITGHFREKLGQGGYGSVYKGVLLPGDLHVAVKMLNGNSNCNGEEFISEVATIGMIHHVNVVRLVGFCSEEMRRALVYEHMPRGSLDKYIYLSERSFSWDKINEIALGIARGINYLHQGCDMQILHFDIKPHNILLDDNFVPKVADFGLAKLYPRDKSFVPDRALRGTVGYMAPEMVSRSFGVISSKSDVYSFGMLLLEMAGGRRNVDPNADSSKSKAYYPSWVYDQLIADQQFDEISNVANMHELERKLCLVGLWCIQMKSHDRPTMSEAIEMLEGGVDALQVPPRPFFCDGDGIGNGMPPPQLWNAAAGDAGGRRNLDMHAENSSQAYYPSWVYDRLTEQQVSAGEISDATAADMHELERKLYIIGLHCIQMKSHDRPTMSEVIEMLEGGVVGLQMPPRTFFCDDESMSPMMDSYQFSSGLTEILEEDE
More
|
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0 | 0 | 0.21407 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_01g0115800 | SBH | 0.000000 | 0.554263 | 0.841124 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os01g02590 | SBH | 0.398098 | 0.372189 | 0.276505 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os01g0115800 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_01g0001170 | SBH | 0.089950 | 0.263308 | 0.395825 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_01g0001070 | RBH | 0.160955 | 0.171025 | 0.792215 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_01g0001210 | SBH | 0.463718 | 0.000000 | 0.650430 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_01g0001090 | SBH | 0.075591 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_01g0001240 | SBH | 11.364197 | 1.983415 | 9.245715 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_01G0013100 | SBH | 4.8139025 | 5.8982375 | 6.5225565 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_01g0001050 | SBH | 0.037199 | 0.353644 | 0.989798 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_01G0015200 | SBH | 1.617323 | 0.890693 | 1.779883 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_01g0001100 | SBH | 0.107549 | 0.055458 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_01g0001240 | RBH | 1.728759 | 0.531123 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_01g0001130 | SBH | 0.287462 | 2.850632 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_01g0001190 | SBH | 0.000000 | 0.000000 | 0.057889 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_01g0001130 | SBH | 0.151789 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_01G001240 | SBH | 0.900158 | 1.196784 | 0.692669 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_01g0001140 | SBH | 3.493958 | 2.049984 | 1.707907 |
