Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsPr106_12g0020180 | OGI:12067070 | 16/16 | PR 106 | Os127742RS1 | Gramene(+IsoSeq) | Chr12:24575661-24576967 | ||||||||
| Gene Symbol | RLCK370, OsRLCK370, WAK128, OsWAK128, WAK129, OsWAK129, OsRLCK375, RLCK375 | ||||||||||
| DNA seq | atgcaaatacaaaggaaaaggcataagaaggacaaagatgagtatttcaagcaaaatggaggtctaaagctatatgatgagatgagatcaaggaaggtagacacaatccgcatactcactgaaaaagatataaaaaaggccactgacaactacagtgaagatcgagttcttggaattggaggtcacggaatggtctacagaggaactttggatgacaacaaagaggtagccataaagaagtccaaagtaattaacgatgaatggagggaagaatttgtcaatgagataataatcttgtcacagatcaaccacagaaacattgtgaggttgataggatgttgcctggatgtacatgtccccatgttggtctacgagtttgtctccaatgggaccttgtctgagttcctccatggcactgatcatagatcaccaatccccttggacattcgcctgaaaatagccacacaatcagcagaagctctagcgtacctgcactcatcaacatctcgcacaatccttcatggggatttcaaatcggccaatattcttttggatggtcagcacaatgcaaaggttgcagattttGgggcatcagcgctgaagtccatgaacgaaagtgagttcatcatgtttgtccaaggaactttgggctaccttgacccggagagcttcattagccattgtcttaccgacaagagtgatgtctacagttttggggtggttctgctggagctgatgacaagaaagagggcaatctttgccaatagcatcaatgaaaaggaatcattgtcctattcttttctcctgatgtttgatcagaacattcaccggaatatgctggacagagaaattatggataaagaaaccatggttgttcttgagaaactttccattcttgccgccaactgcctgcgaccaagaggagatgaccggccaacgatgaaggaagttgcagagtgcctacagatgataaggagacacccaatgcacgcagctagtgatcacaaaggagacagctctgcgcatcacaactatgaaggatcttcatcaccatcaatgtctgcccatttcgacgaaacgatatacaagagcatagaggcatccagattggtacaagatcttgtgagatgatggtatgcttgtgccagcacttaatgtgttaatatcttgtgtagatatcatagtaaatacggtataaaccaatttctgtaatccccttgtatgagaaaattagcaatttgttccccgtggtgatgactgatgatgaatgcttccattctgaataaatattcagttgtacagagtcc
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| CDS seq | atgcaaatacaaaggaaaaggcataagaaggacaaagatgagtatttcaagcaaaatggaggtctaaagctatatgatgagatgagatcaaggaaggtagacacaatccgcatactcactgaaaaagatataaaaaaggccactgacaactacagtgaagatcgagttcttggaattggaggtcacggaatggtctacagaggaactttggatgacaacaaagaggtagccataaagaagtccaaagtaattaacgatgaatggagggaagaatttgtcaatgagataataatcttgtcacagatcaaccacagaaacattgtgaggttgataggatgttgcctggatgtacatgtccccatgttggtctacgagtttgtctccaatgggaccttgtctgagttcctccatggcactgatcatagatcaccaatccccttggacattcgcctgaaaatagccacacaatcagcagaagctctagcgtacctgcactcatcaacatctcgcacaatccttcatggggatttcaaatcggccaatattcttttggatggtcagcacaatgcaaaggttgcagattttGgggcatcagcgctgaagtccatgaacgaaagtgagttcatcatgtttgtccaaggaactttgggctaccttgacccggagagcttcattagccattgtcttaccgacaagagtgatgtctacagttttggggtggttctgctggagctgatgacaagaaagagggcaatctttgccaatagcatcaatgaaaaggaatcattgtcctattcttttctcctgatgtttgatcagaacattcaccggaatatgctggacagagaaattatggataaagaaaccatggttgttcttgagaaactttccattcttgccgccaactgcctgcgaccaagaggagatgaccggccaacgatgaaggaagttgcagagtgcctacagatgataaggagacacccaatgcacgcagctagtgatcacaaaggagacagctctgcgcatcacaactatgaaggatcttcatcaccatcaatgtctgcccatttcgacgaaacgatatacaagagcatagaggcatccagattggtacaagatcttgtgagatga
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| Protein seq | MQIQRKRHKKDKDEYFKQNGGLKLYDEMRSRKVDTIRILTEKDIKKATDNYSEDRVLGIGGHGMVYRGTLDDNKEVAIKKSKVINDEWREEFVNEIIILSQINHRNIVRLIGCCLDVHVPMLVYEFVSNGTLSEFLHGTDHRSPIPLDIRLKIATQSAEALAYLHSSTSRTILHGDFKSANILLDGQHNAKVADFGASALKSMNESEFIMFVQGTLGYLDPESFISHCLTDKSDVYSFGVVLLELMTRKRAIFANSINEKESLSYSFLLMFDQNIHRNMLDREIMDKETMVVLEKLSILAANCLRPRGDDRPTMKEVAECLQMIRRHPMHAASDHKGDSSAHHNYEGSSSPSMSAHFDETIYKSIEASRLVQDLVR |
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| Function | Wall-associated receptor kinase 1 [UniProtKB/Swiss-Prot:Q39191] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsPr106_12g0020180 | OsPr106_12g0020180.01 | Chr12 | 24575661 | 24576967 | + | NAM | ||
| CDS seq | atgcaaatacaaaggaaaaggcataagaaggacaaagatgagtatttcaagcaaaatggaggtctaaagctatatgatgagatgagatcaaggaaggtagacacaatccgcatactcactgaaaaagatataaaaaaggccactgacaactacagtgaagatcgagttcttggaattggaggtcacggaatggtctacagaggaactttggatgacaacaaagaggtagccataaagaagtccaaagtaattaacgatgaatggagggaagaatttgtcaatgagataataatcttgtcacagatcaaccacagaaacattgtgaggttgataggatgttgcctggatgtacatgtccccatgttggtctacgagtttgtctccaatgggaccttgtctgagttcctccatggcactgatcatagatcaccaatccccttggacattcgcctgaaaatagccacacaatcagcagaagctctagcgtacctgcactcatcaacatctcgcacaatccttcatggggatttcaaatcggccaatattcttttggatggtcagcacaatgcaaaggttgcagattttGgggcatcagcgctgaagtccatgaacgaaagtgagttcatcatgtttgtccaaggaactttgggctaccttgacccggagagcttcattagccattgtcttaccgacaagagtgatgtctacagttttggggtggttctgctggagctgatgacaagaaagagggcaatctttgccaatagcatcaatgaaaaggaatcattgtcctattcttttctcctgatgtttgatcagaacattcaccggaatatgctggacagagaaattatggataaagaaaccatggttgttcttgagaaactttccattcttgccgccaactgcctgcgaccaagaggagatgaccggccaacgatgaaggaagttgcagagtgcctacagatgataaggagacacccaatgcacgcagctagtgatcacaaaggagacagctctgcgcatcacaactatgaaggatcttcatcaccatcaatgtctgcccatttcgacgaaacgatatacaagagcatagaggcatccagattggtacaagatcttgtgagatga
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| Protein seq | MQIQRKRHKKDKDEYFKQNGGLKLYDEMRSRKVDTIRILTEKDIKKATDNYSEDRVLGIGGHGMVYRGTLDDNKEVAIKKSKVINDEWREEFVNEIIILSQINHRNIVRLIGCCLDVHVPMLVYEFVSNGTLSEFLHGTDHRSPIPLDIRLKIATQSAEALAYLHSSTSRTILHGDFKSANILLDGQHNAKVADFGASALKSMNESEFIMFVQGTLGYLDPESFISHCLTDKSDVYSFGVVLLELMTRKRAIFANSINEKESLSYSFLLMFDQNIHRNMLDREIMDKETMVVLEKLSILAANCLRPRGDDRPTMKEVAECLQMIRRHPMHAASDHKGDSSAHHNYEGSSSPSMSAHFDETIYKSIEASRLVQDLVR
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 1.601891 | 7.926010 | 5.188064 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_12g0615300 | SBH | 0.172968 | 0.266074 | 0.422754 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os12g42070 | SBH | 0.116887 | 0.178830 | 0.108748 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os12g0615300 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_12g0020780 | SBH | 0.147573 | 0.000000 | 1.252421 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_12g0020880 | RBH | 0.013739 | 0.115015 | 0.423561 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_12g0021220 | RBH | 0.356343 | 0.473369 | 1.123383 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_12g0020540 | SBH | 0.029078 | 0.021040 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_03g0027390 | SBH | 0.0 | 0.0 | 0.000000 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_12G0349900 | SBH | 0 | 0.00879 | 0 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_12g0020030 | RBH | 0.045894 | 0.034146 | 0.225106 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_12G0380000 | RBH | 1.1302525 | 1.44417 | 3.64915 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_12g0020300 | SBH | 0.029979 | 0.072205 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_12g0020500 | SBH | 0.106541 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_12g0020440 | RBH | 0.750916 | 1.341088 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_12g0020490 | SBH | 0.170948 | 0.0 | 0.196356 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_12g0020670 | RBH | 0.045115 | 0.792311 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_12G020180 | RBH | 0.245343 | 0.283648 | 0.285438 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_12g0019980 | RBH | 0.444163 | 1.538679 | 0.734204 |
