Basic Info

Gene ID OGI # | Score   Accession | Assembly | Annotation Location Links
OsPr106_12g0008780 OGI:12026680 | 16/16 PR 106 | Os127742RS1 | Gramene(+IsoSeq) Chr12:9073175-9078912
Gene Symbol NRTP1, OsNRTP1, -
DNA seq

tcattccacttgaacgatttcctcatgatcatccttatcctttatcatgtcgcgttcccaccttctgctgatctcaagcgcagggcgtccagggtgaatgcttgctgcatccctcatagcagcttccgcagcctccaccctctgcctcgtggcgcctcggcaatcgaccgtgacactaagttgctggaggcttgcgaggtgctcgaatccgaactcaaaaccgatcttggaccctgtttcctctgctctgatgtagaaacgcagccgtcggagatccggcattgctccctgcaggcacagcatctcaagcccgccaccgtgataatagtttccaaattcaaactccttcaggcaccggaattgttgactgctgatgataagtctttccttGggggcatgctgtgaattcaacttgatgaagagcagagagggtatgcccccaaggatcaagagttcctcctgtttaatgctacaaacccatagcgaaagatgagtgagattagcaagacatgccatctgctctgggatatgactaatacgcactctgtatatgaccagcttccggagtgacggaacagtgcagcacaatatgtccatcagttttcctctcaggaatccattgcagccaatgtgtagtgactgaagcgcatgctcacccatcatagcgagagatgacttcaaagattcttcgtaattttcggtgttgtgatcaccaagtttgttgctgtcatgcagcattatgggaagcacacttagcctggtcaaccggctcaactgttgtacaaattttatggagtcatattttccagcatccgatagctcctgtaaggcttgtagatctccaatctcatttggcaattctacatcattgccaacaagtagacgcgctaaattttgcaaacgacctatggtcggtggcaattttttgattccactacggcgtatatctagtgtctgcaaatacttcaggtccccaatttgctctggaagctcagtaataccatcagaactaatgctcaaatatgccagccggaagaagctctcaagatgtttaatgtgttgtgtaccgataccatggcaattttcaaataccagtactctcaaacaatgaagtgtttgcagatcagctcccacatcttgcacaccatagtagttcagtgaacgaagctgtgaacacttgcccataatctcctgcatcgctttattgcccagacagttggattggacagagagcctacgaatcttgttagaacaattgtacccttccctttccattacagtggtgaaattctcctcctttgacagggatacaataagatcaaggatcatgtcatgcactcggcaagcactcgccctgccatcatactggatgtcaattggttggatcatgcttctgtttacgagatcattgaagtagttctcagcaacttgatccaatgttagtcccttcacttcactaatgaacccttcagctatccatctccatattagcgcttctctttcaatcctgtaatcctctggaaacacactaagatatagcaagcaagtttttagataatgtgggagatcataatagctaagcaggagtatatctgtcattccttgttgagtaaatgctgaaccaatagagttgtacacttcctcccattgctccacaatatttggttttccaacaagcaggctagctacactgataatagctaacggcaagccatggcactttctaattattccacaagagacttcctccaaataaggagggcatgcagacacatcacgaaaaaccctcttcaaaaatagctcccgagagtcctgttcacttagaggttgaatattgtgaacatgtcctgctacagtgtagcagcatgatgtggctacattagtatctcttgtcgttgtaattattctactgcataaattgttctcaggtagagcagacttgacaaattcccatgcttttgtgctccaaatatcatcaacaatgatgaggtacctacaaatataagtctagcattaaaatttgtggaatctggtgattttatttggcactaaatatggtactttttttatttacttttttagagaacggtaatttttactcggcctctatatctaaccggatatatgcaaccttttaaattaggaatttagcccctcaaacaaaccaatgtgaaattcactcctatggatatttgaacttaagaccttcgggtcctactcaggtcactgcaaccactagactatatgccctttcacgtatatggtacaactatttgagatgaaaatgctattgtatggacatggtgtgtctaaagccacaatgctttgctcaatgccatcatgcccttgcatctttctttatctatactaattaaacattctcttaaatgatctcatgtcacgttaaccctgaaaggataaaaactagaaatgtctcatgttttcttttatacttttatgagaaaattccgtataactacagatttaaacctcaaataaataaactatacttttaatactaactttatcacgaaactacacatttagtcaatcgtaaaactatagaattagcaatgaatttatcagaaaattatagtttttaaatgttatccaaaatgcaagttgttcttggctaaatattgtcttcgttacaaacatctctactactaatcagaggcttttccattccaaaaaggcacctattgatcatatacttaaaaaaatccaagaaatgataagtatcataagatacaaaagaaaatagtagaatttatcatatatatctctatatcatatagcccaaaaatccatctactttagtataaagtagccgaaccaggattgtgctaagccccgggccaagaccaatggaggtatcaccagcaaaggatacccacaacactaagaaatgaccaaaatagaaacataaattcattgtggtgtactggtgtgatatagacgtaaaacaccaaatcgcactactagaaaaatcattttttccgacataagggtcttttttccgcaggcggacatgacccttagagccaaatgactgcatacaaaaatataaatcagggtgaagttcgttgtccggaccacttaagcggcgcctgcgaaaatagattttcacaggcgaaccttatgtggccgcctgcaaaaatcgtacctaccaaaaaaaaaccacacttaccttctcctcccaccctcccaccactcaactctctctctctctctccctctccttcactgactcagtcttctctcctcttctctccctcactgactctcctcttcctcactgactctcctctcctctcctctccggcggcgcggcggggcagcggcgccgcggggacggcggcgtctcacctccctccctccctcacagatctggccggaggagggaggggggaggccggcaggggcgacggcggtgacgatggcgtggggcggccggcggcgtctcccttccctccctccctcgcagatctggccggaggagggagaggggaggctgacggaggcggcggcggcgacgacggtgacgacgacgcgcggggcgtcggcggtggctcccctcccccctccctcccagatctggctggaggagggaggggggaggccggcggcggtgacaacggcgtggagcggcggcggcgacgacgatgatggcggtggcggcgacaatgacgacagcggcggctctcctcccctcccctctcagatccggctgggggagggcggcggcggcggcgagctgcgtgcggcgattttttttgttcgtttttttgcattttcataggcgggccgttgccctgcagtcgttgtggtgcaggcggatgtccctcctgcctgcgaaaattagttttggccgcctgcgaaaatttgttttctagtagtgtcggaaacattttcagtttttcaccagacgtagctgtagatcttcgtaccgtcagtctgttcctgcaatacttcTtttttttttttgcgaattgggttgcggtgttggtgcataaaaagatggcaatgtcttgaccttcttcattttctctcccttacgaatttaacacaaattgaatggaatcaattcatttcttccttctctatcccgtacgaatttaacacaaactgaaggaatcgattcattatatccttctctcccctttacaaatttaacacaaattgaatggaattaattctagtcttccttctctctctcttacgaatttaacacaacttggatggaatcaatccttctctaagcagctaacatttttgtctttggtttatggacttcgttagggagtcgattatgcatgattaatggtaatcctgtggtcttgaactaatttagctccaatatattccgtaaaaaataattctaacttattaatacacatgatagttgtaatataataacgactgctatatgttcactgcagttattttttttaacatagctagtgttcgcctcagtattttttactaaatatactgcattctactatctccgtttcattcatattataagtcactttaacttttttttttcaaactttttgactaactttcaaaatatattatagatgttcatattataagtcactttaacttttttcttcaaactttgactaacttttaacatagcaacatttctaacaacaaagaaacatattatcaaaatatattaaatgttaaattaacggaactaatttggtattatagatgttgctaaatttttctataaacttagtaaactactttgaaaagagtcaaagcgacttataatataaaacataaggaatactatatggaaccttcgcattgctagaagcttagaaccttatcacatacataatgattcttcaaacaaacatggaaatgtacaaatagaggcaaagggtgtagaaaagactaaatattttgcttacatacctcttatcatgtaggaatgctctgagcttgtatatgagttgccgctcgtcatctgatgtatcaacactgctccctaactctttgagcatatcagttagtatttttgctatgttaggattccgtgaaactggcacaaaagttgagcaatcaaattggcctttgattttgtggtgaacttggtttgccagagttgtcttgccaagacctccaaatcccacaatggatactactttgagttgtggttcagagtcatctttcttcaaccattcaacgatcttctcccttggaccatcaatcccaacaagcctctctgcttccacaaaaagtgccggcaatcgagggtcgatttgaaccttgcccaaattaacagcggattcatcaaacttgtacctccatcggcgatcgctttcttcctgcacacgagctttgagtttgttgattaacttaccaatcttgtggcgtgaccataactttttaatcttacttgttgtcttcttcacaaggtcggccttatcgtaaccatcactttccagcttgtgcataaagaggtcaatgcaatcttcaacatcatagcttagctcacgaaccttgtttctccaatccttcacttgctcgtctaacctctcttcgttgttcgccagcttaactagaagggtattcatgctactcagctcgtccttgagaaagttgatcccatccttcacacctttgagaagcttgctctccccttcgatcaacgcagagagctttggaagcagggagctcatggcacccgtggaaacactcactatagctccaaccat

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CDS seq

atggttggagctatagtgagtgtttccacgggtgccatgagctccctgcttccaaagctctctgcgttgatcgaaggggagagcaagcttctcaaaggtgtgaaggatgggatcaactttctcaaggacgagctgagtagcatgaatacccttctagttaagctggcgaacaacgaagagaggttagacgagcaagtgaaggattggagaaacaaggttcgtgagctaagctatgatgttgaagattgcattgacctctttatgcacaagctggaaagtgatggttacgataaggccgaccttgtgaagaagacaacaagtaagattaaaaagttatggtcacgccacaagattggtaagttaatcaacaaactcaaagctcgtgtgcaggaagaaagcgatcgccgatggaggtacaagtttgatgaatccgctgttaatttgggcaaggttcaaatcgaccctcgattgccggcactttttgtggaagcagagaggcttgttgggattgatggtccaagggagaagatcgttgaatggttgaagaaagatgactctgaaccacaactcaaagtagtatccattgtgggatttggaggtcttggcaagacaactctggcaaaccaagttcaccacaaaatcaaaggccaatttgattgctcaacttttgtgccagtttcacggaatcctaacatagcaaaaatactaactgatatgctcaaagagttagggagcagtgttgatacatcagatgacgagcggcaactcatatacaagctcagagcattcctacatgataagaggtacctcatcattgttgatgatatttggagcacaaaagcatgggaatttgtcaagtctgctctacctgagaacaatttatgcagtagaataattacaacgacaagagatactaatgtagccacatcatgctgctacactgtagcaggacatgttcacaatattcaacctctaagtgaacaggactctcgggagctatttttgaagagggtttttcgtgatgtgtctgcatgccctccttatttggaggaagtctcttgtggaataattagaaagtgccatggcttgccgttagctattatcagtgtagctagcctgcttgttggaaaaccaaatattgtggagcaatgggaggaagtgtacaactctattggttcagcatttactcaacaaggaatgacagatatactcctgcttagctattatgatctcccacattatctaaaaacttgcttgctatatcttagtgtgtttccagaggattacaggattgaaagagaagcgctaatatggagatggatagctgaagggttcattagtgaagtgaagggactaacattggatcaagttgctgagaactacttcaatgatctcgtaaacagaagcatgatccaaccaattgacatccagtatgatggcagggcgagtgcttgccgagtgcatgacatgatccttgatcttattgtatccctgtcaaaggaggagaatttcaccactgtaatggaaagggaagggtacaattgttctaacaagattcgtaggctctctgtccaatccaactgtctgggcaataaagcgatgcaggagattatgggcaagtgttcacagcttcgttcactgaactactatggtgtgcaagatgtgggagctgatctgcaaacacttcattgtttgagagtactggtatttgaaaattgccatggtatcggtacacaacacattaaacatcttgagagcttcttccggctggcatatttgagcattagttctgatggtattactgagcttccagagcaaattggggacctgaagtatttgcagacactagatatacgccgtagtggaatcaaaaaattgccaccgaccataggtcgtttgcaaaatttagcgcgtctacttgttggcaatgatgtagaattgccaaatgagattggagatctacaagccttacaggagctatcggatgctggaaaatatgactccataaaatttgtacaacagttgagccggttgaccaggctaagtgtgcttcccataatgctgcatgacagcaacaaacttggtgatcacaacaccgaaaattacgaagaatctttgaagtcatctctcgctatgatgggtgagcatgcgcttcagtcactacacattggctgcaatggattcctgagaggaaaactgatggacatattgtgctgcactgttccgtcactccggaagctggtcatatacagagtgcgtattagtcatatcccagagcagatggcatgtcttgctaatctcactcatctttcgctatgggtttgtagcattaaacaggaggaactcttgatccttgggggcataccctctctgctcttcatcaagttgaattcacagcatgccccCaaggaaagacttatcatcagcagtcaacaattccggtgcctgaaggagtttgaatttggaaactattatcacggtggcgggcttgagatgctgtgcctgcagggagcaatgccggatctccgacggctgcgtttctacatcagagcagaggaaacagggtccaagatcggttttgagttcggattcgagcacctcgcaagcctccagcaacttagtgtcacggtcgattgccgaggcgccacgaggcagagggtggaggctgcggaagctgctatgagggatgcagcaagcattcaccctggacgccctgcgcttgagatcagcagaaggtgggaacgcgacatgataaaggataaggatgatcatgaggaaatcgttcaagtggaatga

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Protein seq

MVGAIVSVSTGAMSSLLPKLSALIEGESKLLKGVKDGINFLKDELSSMNTLLVKLANNEERLDEQVKDWRNKVRELSYDVEDCIDLFMHKLESDGYDKADLVKKTTSKIKKLWSRHKIGKLINKLKARVQEESDRRWRYKFDESAVNLGKVQIDPRLPALFVEAERLVGIDGPREKIVEWLKKDDSEPQLKVVSIVGFGGLGKTTLANQVHHKIKGQFDCSTFVPVSRNPNIAKILTDMLKELGSSVDTSDDERQLIYKLRAFLHDKRYLIIVDDIWSTKAWEFVKSALPENNLCSRIITTTRDTNVATSCCYTVAGHVHNIQPLSEQDSRELFLKRVFRDVSACPPYLEEVSCGIIRKCHGLPLAIISVASLLVGKPNIVEQWEEVYNSIGSAFTQQGMTDILLLSYYDLPHYLKTCLLYLSVFPEDYRIEREALIWRWIAEGFISEVKGLTLDQVAENYFNDLVNRSMIQPIDIQYDGRASACRVHDMILDLIVSLSKEENFTTVMEREGYNCSNKIRRLSVQSNCLGNKAMQEIMGKCSQLRSLNYYGVQDVGADLQTLHCLRVLVFENCHGIGTQHIKHLESFFRLAYLSISSDGITELPEQIGDLKYLQTLDIRRSGIKKLPPTIGRLQNLARLLVGNDVELPNEIGDLQALQELSDAGKYDSIKFVQQLSRLTRLSVLPIMLHDSNKLGDHNTENYEESLKSSLAMMGEHALQSLHIGCNGFLRGKLMDILCCTVPSLRKLVIYRVRISHIPEQMACLANLTHLSLWVCSIKQEELLILGGIPSLLFIKLNSQHAPKERLIISSQQFRCLKEFEFGNYYHGGGLEMLCLQGAMPDLRRLRFYIRAEETGSKIGFEFGFEHLASLQQLSVTVDCRGATRQRVEAAEAAMRDAASIHPGRPALEISRRWERDMIKDKDDHEEIVQVE

Function Disease resistance protein RGA5 [UniProtKB/Swiss-Prot:Q2R8L1]

Transcripts

Gene Transcript Chromosome Start End Strand Source
OsPr106_12g0008780 OsPr106_12g0008780.01 Chr12 9073175 9078912 - NAM
CDS seq

atggttggagctatagtgagtgtttccacgggtgccatgagctccctgcttccaaagctctctgcgttgatcgaaggggagagcaagcttctcaaaggtgtgaaggatgggatcaactttctcaaggacgagctgagtagcatgaatacccttctagttaagctggcgaacaacgaagagaggttagacgagcaagtgaaggattggagaaacaaggttcgtgagctaagctatgatgttgaagattgcattgacctctttatgcacaagctggaaagtgatggttacgataaggccgaccttgtgaagaagacaacaagtaagattaaaaagttatggtcacgccacaagattggtaagttaatcaacaaactcaaagctcgtgtgcaggaagaaagcgatcgccgatggaggtacaagtttgatgaatccgctgttaatttgggcaaggttcaaatcgaccctcgattgccggcactttttgtggaagcagagaggcttgttgggattgatggtccaagggagaagatcgttgaatggttgaagaaagatgactctgaaccacaactcaaagtagtatccattgtgggatttggaggtcttggcaagacaactctggcaaaccaagttcaccacaaaatcaaaggccaatttgattgctcaacttttgtgccagtttcacggaatcctaacatagcaaaaatactaactgatatgctcaaagagttagggagcagtgttgatacatcagatgacgagcggcaactcatatacaagctcagagcattcctacatgataagaggtacctcatcattgttgatgatatttggagcacaaaagcatgggaatttgtcaagtctgctctacctgagaacaatttatgcagtagaataattacaacgacaagagatactaatgtagccacatcatgctgctacactgtagcaggacatgttcacaatattcaacctctaagtgaacaggactctcgggagctatttttgaagagggtttttcgtgatgtgtctgcatgccctccttatttggaggaagtctcttgtggaataattagaaagtgccatggcttgccgttagctattatcagtgtagctagcctgcttgttggaaaaccaaatattgtggagcaatgggaggaagtgtacaactctattggttcagcatttactcaacaaggaatgacagatatactcctgcttagctattatgatctcccacattatctaaaaacttgcttgctatatcttagtgtgtttccagaggattacaggattgaaagagaagcgctaatatggagatggatagctgaagggttcattagtgaagtgaagggactaacattggatcaagttgctgagaactacttcaatgatctcgtaaacagaagcatgatccaaccaattgacatccagtatgatggcagggcgagtgcttgccgagtgcatgacatgatccttgatcttattgtatccctgtcaaaggaggagaatttcaccactgtaatggaaagggaagggtacaattgttctaacaagattcgtaggctctctgtccaatccaactgtctgggcaataaagcgatgcaggagattatgggcaagtgttcacagcttcgttcactgaactactatggtgtgcaagatgtgggagctgatctgcaaacacttcattgtttgagagtactggtatttgaaaattgccatggtatcggtacacaacacattaaacatcttgagagcttcttccggctggcatatttgagcattagttctgatggtattactgagcttccagagcaaattggggacctgaagtatttgcagacactagatatacgccgtagtggaatcaaaaaattgccaccgaccataggtcgtttgcaaaatttagcgcgtctacttgttggcaatgatgtagaattgccaaatgagattggagatctacaagccttacaggagctatcggatgctggaaaatatgactccataaaatttgtacaacagttgagccggttgaccaggctaagtgtgcttcccataatgctgcatgacagcaacaaacttggtgatcacaacaccgaaaattacgaagaatctttgaagtcatctctcgctatgatgggtgagcatgcgcttcagtcactacacattggctgcaatggattcctgagaggaaaactgatggacatattgtgctgcactgttccgtcactccggaagctggtcatatacagagtgcgtattagtcatatcccagagcagatggcatgtcttgctaatctcactcatctttcgctatgggtttgtagcattaaacaggaggaactcttgatccttgggggcataccctctctgctcttcatcaagttgaattcacagcatgccccCaaggaaagacttatcatcagcagtcaacaattccggtgcctgaaggagtttgaatttggaaactattatcacggtggcgggcttgagatgctgtgcctgcagggagcaatgccggatctccgacggctgcgtttctacatcagagcagaggaaacagggtccaagatcggttttgagttcggattcgagcacctcgcaagcctccagcaacttagtgtcacggtcgattgccgaggcgccacgaggcagagggtggaggctgcggaagctgctatgagggatgcagcaagcattcaccctggacgccctgcgcttgagatcagcagaaggtgggaacgcgacatgataaaggataaggatgatcatgaggaaatcgttcaagtggaatga

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Protein seq

MVGAIVSVSTGAMSSLLPKLSALIEGESKLLKGVKDGINFLKDELSSMNTLLVKLANNEERLDEQVKDWRNKVRELSYDVEDCIDLFMHKLESDGYDKADLVKKTTSKIKKLWSRHKIGKLINKLKARVQEESDRRWRYKFDESAVNLGKVQIDPRLPALFVEAERLVGIDGPREKIVEWLKKDDSEPQLKVVSIVGFGGLGKTTLANQVHHKIKGQFDCSTFVPVSRNPNIAKILTDMLKELGSSVDTSDDERQLIYKLRAFLHDKRYLIIVDDIWSTKAWEFVKSALPENNLCSRIITTTRDTNVATSCCYTVAGHVHNIQPLSEQDSRELFLKRVFRDVSACPPYLEEVSCGIIRKCHGLPLAIISVASLLVGKPNIVEQWEEVYNSIGSAFTQQGMTDILLLSYYDLPHYLKTCLLYLSVFPEDYRIEREALIWRWIAEGFISEVKGLTLDQVAENYFNDLVNRSMIQPIDIQYDGRASACRVHDMILDLIVSLSKEENFTTVMEREGYNCSNKIRRLSVQSNCLGNKAMQEIMGKCSQLRSLNYYGVQDVGADLQTLHCLRVLVFENCHGIGTQHIKHLESFFRLAYLSISSDGITELPEQIGDLKYLQTLDIRRSGIKKLPPTIGRLQNLARLLVGNDVELPNEIGDLQALQELSDAGKYDSIKFVQQLSRLTRLSVLPIMLHDSNKLGDHNTENYEESLKSSLAMMGEHALQSLHIGCNGFLRGKLMDILCCTVPSLRKLVIYRVRISHIPEQMACLANLTHLSLWVCSIKQEELLILGGIPSLLFIKLNSQHAPKERLIISSQQFRCLKEFEFGNYYHGGGLEMLCLQGAMPDLRRLRFYIRAEETGSKIGFEFGFEHLASLQQLSVTVDCRGATRQRVEAAEAAMRDAASIHPGRPALEISRRWERDMIKDKDDHEEIVQVE

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Event Type Chromosome Start End Strand Alternative mRNAs Total mRNAs Source

Expression

Leaf Root Panicle
FPKM 0.0 0.0 0.0

Homologues

Genome & Annotation Homologs Type Expression(FPKM)
Leaf Root Panicle
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) OsNip_12g0272800 SBH 0.0 0.0 0.0
Nipponbare | IRGSP 1.0 | MSU LOC_Os12g17330 RBH 0.0 0.0 0.0
Nipponbare | IRGSP 1.0 | RAP-db Os12g0272800 SBH None None None
Azucena | AzucenaRS1 | Gramene(+IsoSeq) OsAzu_12g0009030 SBH 0.0 0.0 0.0
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) OsKeNa_12g0009150 RBH 0.0 0.0 0.0
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) OsCMeo_12g0009150 SBH 0.709560 3.923890 4.931050
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) OsARC_12g0008980 SBH 0.0 0.206512 None
PR 106 | Os127742RS1 | Gramene(+IsoSeq) NA NA NA NA NA
Minghui 63 | MH63RS3 | HZAU OsMH63_12G0136400 RBH 0 0 0
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) OsIR64_12g0008820 SBH 0.058034 0.255694 0.476529
Zhenshan 97 | ZS97RS3 | HZAU OsZS97_12G0151200 RBH 0 0 0
LIMA | Os127564RS1 | Gramene(+IsoSeq) OsLima_12g0008720 RBH 0.0 0.0 None
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) OsKYG_12g0009020 SBH 0.0 0.0 None
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) OsGoSa_12g0008920 RBH 0.0 0.0 None
LIU XU | Os125827RS1 | Gramene(+IsoSeq) OsLiXu_12g0008900 RBH 0.0 0.0 0.0
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) OsLaMu_12g0009100 SBH 0.088794 0.569195 None
N22 | OsN22RS2 | Gramene(+IsoSeq) OsN22_12G008810 RBH 0.0 0.0 0.0
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) OsNaBo_12g0008750 SBH 0.0 0.0 0.750651
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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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